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Report for CCDS1867.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1867.1 Public Homo sapiens 2 SANBR 24 110 108 CCDS HistoryNCBI Gene:84542Re-query CCDS DB by CCDS ID:1867.1Re-query CCDS DB by GeneID:84542See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1867.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295031.9 ENSP00000295031.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000295031.9Link to Ensembl Protein Viewer:ENSP00000295031.5Re-query CCDS DB by Nucleotide ID:ENST00000295031Re-query CCDS DB by Protein ID:ENSP00000295031
Original member Current member EBI ENST00000356719.6 ENSP00000349154.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000356719.6Link to Ensembl Protein Viewer:ENSP00000349154.3Re-query CCDS DB by Nucleotide ID:ENST00000356719Re-query CCDS DB by Protein ID:ENSP00000349154
Original member Current member NCBI NM_001330433.2 NP_001317362.1 Accepted alive Link to Nucleotide Sequence:NM_001330433.2Link to Protein Sequence:NP_001317362.1Re-query CCDS DB by Nucleotide ID:NM_001330433Re-query CCDS DB by Protein ID:NP_001317362Link to BLAST:NP_001317362.1
Original member Current member NCBI NM_001330435.2 NP_001317364.1 Accepted alive Link to Nucleotide Sequence:NM_001330435.2Link to Protein Sequence:NP_001317364.1Re-query CCDS DB by Nucleotide ID:NM_001330435Re-query CCDS DB by Protein ID:NP_001317364Link to BLAST:NP_001317364.1
Original member Current member NCBI NM_032506.4 NP_115895.2 Accepted alive Link to Nucleotide Sequence:NM_032506.4Link to Protein Sequence:NP_115895.2Re-query CCDS DB by Nucleotide ID:NM_032506Re-query CCDS DB by Protein ID:NP_115895Link to BLAST:NP_115895.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317362.1 707 Q6NSI8-2 707 100% 0 0
NP_001317364.1 707 Q6NSI8-2 707 100% 0 0
NP_115895.2 707 Q6NSI8-2 707 100% 0 0

Chromosomal Locations for CCDS 1867.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 61070351 61070500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 61071606 61071792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 61073458 61073551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 61076920 61077158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 61081452 61081510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 61083154 61083314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 61088159 61088245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 61088358 61088468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 61092464 61092587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 61097700 61097852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 61103853 61103998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 61106563 61106662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 61108317 61108349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 61109197 61109296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 61115979 61116070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 61117357 61117385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 61117467 61117540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 61118028 61118116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 61134137 61134232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2124 nt):
ATGAGTCGTGGATATTCAGAAAACAACAATTTCCTGAACAATAATAACCAAATGGTATTGGACATGATCC
TTTATCCATTAATTGGAATCCCTCAGACTATCAACTGGGAAACTATAGCAAGGCTCGTGCCTGGATTAAC
ACCAAAAGAGTGTGCAAAAAGGTTTGATGAATTAAAGAGCAGTGGAAGCTCGCCTGTTGACAACCAGTAT
AATTCCCTAATGGCTGCTGGAGAGAGTCCTGTTGAAACTTTAGCCACATATATCAAATCCTCACTTCTTG
ACATACATGGAGAATTTCAGGAGACTCCAGTTGGACATGATGCAGTTTCCAAAACTGGAAGACATAGTAT
AGCTTCCACAAGGAATTGTTCTTCAGAAAGTGAAAATTGTACTACTCATAATGGTGGAGAAATGACTGAA
GAATCTGAAGGGCCAAACATGGTGATCCATGTGTGTGATGAAGCAAAAAACTTGAAAGAAGATTTTACTT
GCCCGCGAGATCTTTTGATATCAGAAATGAAGTACTTTGCTGAATATTTATCTATGGATGCCCAGCGCTG
GGAAGAGGTGGACATTTCAGTTCATTGCGACGTTCACATTTTCAACTGGTTGATAAAATACATTAAAAGG
AACACTAAGGAGAATAAAGATTGTGAGATGCCCACTTTAGAGCCAGGAAATGTCATTTCAATTCTTATTT
CTTCGGAGTTTTTAAAAATGGATTCACTAGTTGAACAGTGTATTCAGTATTGCCACAAAAATATGAATGC
CATAGTAGCTACCCCATGCAACATGAACTGTATTAATGCAAATCTTCTCACACGTATAGCTGATCTGTTC
TCACACAATGAAGTTGATGATTTAAAGGACAAAAAAGATAAATTTAAAAGCAAACTTTTTTGTAAGAAGA
TTGAAAGACTGTTTGATCCTGAGTACTTGAATCCAGATTCTCGGAGTAATGCAGCAACATTGTATAGATG
CTGTTTGTGTAAGAAACTTTTAACAAAAGAAACAGAAAGAAGAATTCCTTGCATTCCTGGAAAAATCAAT
GTGGATCGACGTGGAAATATTGTCTATATTCACATAAGAGATAAGACATGGGATGTTCATGAGTATTTGA
ATAGTCTTTTCGAAGAATTAAAATCTTGGAGAGATGTATACTGGCGATTGTGGGGAACAATCAATTGGCT
GACTTGTTCAAGATGTTATCAGGCCTTTCTCTGTATTGAATTTTCACATTGTCAATACCACTCAGAAACA
GTGGTTTATCCTACTGCAGCAAGTTCATTGAATACTGTTGGCACTGGAATTTATCCCTGCTGTAACCAAA
AGGTTCTTCGGTTTGATCCTACTCAGCTTACAAAGGGCTGTAAAGTGAGGGACCACATGGTTACACTTCG
TGATCAAGGTGAAGGCGGAGATTTGCCGTCCTGTCCCACTGCTAGAATGTTGGACGATTTGCACAAGTAC
AGAGATGTCATTGTTGTGCCTTTTTCAAAAGATACAGTTAGTGATGTTGGGGTTGGCCTCTGTGATGAAA
AGGGTATAGAATGTGATGTTTTACTGGAGCCAAATACACCATGGGGTCCCAAAACTGGGGAGCTCAATGC
TTTCTTGTCATTGAAAAACTGGACTCTACAACTGAAACAACAGTCACTGTTTTCAGAAGAAGAAGAATAT
ACCACTGGATCTGAGGTCACTGAAGATGAAGTTGGAGATGAAGAAGAAGTATCCAAGAAACAAAGGAAAA
AGGAGAAGCCAAAGAAGTTCACTAGACAACCAAAAAAGCAGGTATCTTCACCCTGTGCCCAGAGGAAAGA
AAAGGCATTGGAGAAGTCAGCTTCTAGAGATGTGTCTCCTTTCGTTATGAGTATGCAGAAGAATAAGTGG
GATGCCACAAGATCCTTGAGATTCAACCAGGATGCACAAAGAGAAGACGATCAACGGCGAATGACTGAAA
TTACAGGGCACCTAATAAAAATGAGATTGGGGGATCTGGACCGAGTCAAGTCAAAGGAAGCAAAAGAAAC
AGACAAACTGAGACCCAGAGACGGCACTGTGTCTAAGAGCAACAGAAAAAGTGGTTTGAGCAGTGTGCTC
TTGATGACAGTGTTGCTGTGTTAA

Translation (707 aa):
MSRGYSENNNFLNNNNQMVLDMILYPLIGIPQTINWETIARLVPGLTPKECAKRFDELKSSGSSPVDNQY
NSLMAAGESPVETLATYIKSSLLDIHGEFQETPVGHDAVSKTGRHSIASTRNCSSESENCTTHNGGEMTE
ESEGPNMVIHVCDEAKNLKEDFTCPRDLLISEMKYFAEYLSMDAQRWEEVDISVHCDVHIFNWLIKYIKR
NTKENKDCEMPTLEPGNVISILISSEFLKMDSLVEQCIQYCHKNMNAIVATPCNMNCINANLLTRIADLF
SHNEVDDLKDKKDKFKSKLFCKKIERLFDPEYLNPDSRSNAATLYRCCLCKKLLTKETERRIPCIPGKIN
VDRRGNIVYIHIRDKTWDVHEYLNSLFEELKSWRDVYWRLWGTINWLTCSRCYQAFLCIEFSHCQYHSET
VVYPTAASSLNTVGTGIYPCCNQKVLRFDPTQLTKGCKVRDHMVTLRDQGEGGDLPSCPTARMLDDLHKY
RDVIVVPFSKDTVSDVGVGLCDEKGIECDVLLEPNTPWGPKTGELNAFLSLKNWTLQLKQQSLFSEEEEY
TTGSEVTEDEVGDEEEVSKKQRKKEKPKKFTRQPKKQVSSPCAQRKEKALEKSASRDVSPFVMSMQKNKW
DATRSLRFNQDAQREDDQRRMTEITGHLIKMRLGDLDRVKSKEAKETDKLRPRDGTVSKSNRKSGLSSVL
LMTVLLC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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