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Report for CCDS13645.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13645.1 Public Homo sapiens 21 CLDN14 24 110 108 CCDS HistoryNCBI Gene:23562Re-query CCDS DB by CCDS ID:13645.1Re-query CCDS DB by GeneID:23562See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13645.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000342108.2 ENSP00000339292.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000342108.2Link to Ensembl Protein Viewer:ENSP00000339292.2Re-query CCDS DB by Nucleotide ID:ENST00000342108Re-query CCDS DB by Protein ID:ENSP00000339292
Original member Current member EBI ENST00000399135.6 ENSP00000382087.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000399135.6Link to Ensembl Protein Viewer:ENSP00000382087.1Re-query CCDS DB by Nucleotide ID:ENST00000399135Re-query CCDS DB by Protein ID:ENSP00000382087
Original member Current member EBI ENST00000399136.5 ENSP00000382088.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399136.5Link to Ensembl Protein Viewer:ENSP00000382088.1Re-query CCDS DB by Nucleotide ID:ENST00000399136Re-query CCDS DB by Protein ID:ENSP00000382088
Original member Current member EBI ENST00000399137.5 ENSP00000382090.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399137.5Link to Ensembl Protein Viewer:ENSP00000382090.1Re-query CCDS DB by Nucleotide ID:ENST00000399137Re-query CCDS DB by Protein ID:ENSP00000382090
Original member Current member EBI ENST00000399139.5 ENSP00000382092.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399139.5Link to Ensembl Protein Viewer:ENSP00000382092.1Re-query CCDS DB by Nucleotide ID:ENST00000399139Re-query CCDS DB by Protein ID:ENSP00000382092
Original member Current member NCBI NM_001146077.2 NP_001139549.1 Accepted alive Link to Nucleotide Sequence:NM_001146077.2Link to Protein Sequence:NP_001139549.1Re-query CCDS DB by Nucleotide ID:NM_001146077Re-query CCDS DB by Protein ID:NP_001139549Link to BLAST:NP_001139549.1
Original member Current member NCBI NM_001146078.3 NP_001139550.1 Accepted alive Link to Nucleotide Sequence:NM_001146078.3Link to Protein Sequence:NP_001139550.1Re-query CCDS DB by Nucleotide ID:NM_001146078Re-query CCDS DB by Protein ID:NP_001139550Link to BLAST:NP_001139550.1
Original member Current member NCBI NM_001146079.2 NP_001139551.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001146079.2Link to Protein Sequence:NP_001139551.1Re-query CCDS DB by Nucleotide ID:NM_001146079Re-query CCDS DB by Protein ID:NP_001139551Link to BLAST:NP_001139551.1
Original member Current member NCBI NM_012130.4 NP_036262.1 Accepted alive Link to Nucleotide Sequence:NM_012130.4Link to Protein Sequence:NP_036262.1Re-query CCDS DB by Nucleotide ID:NM_012130Re-query CCDS DB by Protein ID:NP_036262Link to BLAST:NP_036262.1
Original member Current member NCBI NM_144492.3 NP_652763.1 Accepted alive Link to Nucleotide Sequence:NM_144492.3Link to Protein Sequence:NP_652763.1Re-query CCDS DB by Nucleotide ID:NM_144492Re-query CCDS DB by Protein ID:NP_652763Link to BLAST:NP_652763.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001139549.1 239 O95500 239 100% 0 0
NP_001139550.1 239 O95500 239 100% 0 0
NP_001139551.1 239 O95500 239 100% 0 0
NP_036262.1 239 O95500 239 100% 0 0
NP_652763.1 239 O95500 239 100% 0 0

Chromosomal Locations for CCDS 13645.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 36460976 36461695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (720 nt):
ATGGCCAGCACGGCCGTGCAGCTTCTGGGCTTCCTGCTCAGCTTCCTGGGCATGGTGGGCACGTTGATCA
CCACCATCCTGCCGCACTGGCGGAGGACAGCGCACGTGGGCACCAACATCCTCACGGCCGTGTCCTACCT
GAAAGGGCTCTGGATGGAGTGTGTGTGGCACAGCACAGGCATCTACCAGTGCCAGATCTACCGATCCCTG
CTGGCGCTGCCCCAAGACCTCCAGGCTGCCCGCGCCCTCATGGTCATCTCCTGCCTGCTCTCGGGCATAG
CCTGCGCCTGCGCCGTCATCGGGATGAAGTGCACGCGCTGCGCCAAGGGCACACCCGCCAAGACCACCTT
TGCCATCCTCGGCGGCACCCTCTTCATCCTGGCCGGCCTCCTGTGCATGGTGGCCGTCTCCTGGACCACC
AACGACGTGGTGCAGAACTTCTACAACCCGCTGCTGCCCAGCGGCATGAAGTTTGAGATTGGCCAGGCCC
TGTACCTGGGCTTCATCTCCTCGTCCCTCTCGCTCATTGGTGGCACCCTGCTTTGCCTGTCCTGCCAGGA
CGAGGCACCCTACAGGCCCTACCAGGCCCCGCCCAGGGCCACCACGACCACTGCAAACACCGCACCTGCC
TACCAGCCACCAGCTGCCTACAAAGACAATCGGGCCCCCTCAGTGACCTCGGCCACGCACAGCGGGTACA
GGCTGAACGACTACGTGTGA

Translation (239 aa):
MASTAVQLLGFLLSFLGMVGTLITTILPHWRRTAHVGTNILTAVSYLKGLWMECVWHSTGIYQCQIYRSL
LALPQDLQAARALMVISCLLSGIACACAVIGMKCTRCAKGTPAKTTFAILGGTLFILAGLLCMVAVSWTT
NDVVQNFYNPLLPSGMKFEIGQALYLGFISSSLSLIGGTLLCLSCQDEAPYRPYQAPPRATTTTANTAPA
YQPPAAYKDNRAPSVTSATHSGYRLNDYV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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