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Report for CCDS12598.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12598.1 Public Homo sapiens 19 ZNF526 24 110 108 CCDS HistoryNCBI Gene:116115Re-query CCDS DB by CCDS ID:12598.1Re-query CCDS DB by GeneID:116115See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12598.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301215.8 ENSP00000301215.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000301215.8Link to Ensembl Protein Viewer:ENSP00000301215.2Re-query CCDS DB by Nucleotide ID:ENST00000301215Re-query CCDS DB by Protein ID:ENSP00000301215
Original member Current member NCBI NM_001314033.3 NP_001300962.1 Accepted alive Link to Nucleotide Sequence:NM_001314033.3Link to Protein Sequence:NP_001300962.1Re-query CCDS DB by Nucleotide ID:NM_001314033Re-query CCDS DB by Protein ID:NP_001300962Link to BLAST:NP_001300962.1
Original member Current member NCBI NM_133444.3 NP_597701.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_133444.3Link to Protein Sequence:NP_597701.1Re-query CCDS DB by Nucleotide ID:NM_133444Re-query CCDS DB by Protein ID:NP_597701Link to BLAST:NP_597701.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001300962.1 670 Q8TF50 670 100% 0 0
NP_597701.1 670 Q8TF50 670 100% 0 0

Chromosomal Locations for CCDS 12598.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 42224404 42226416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2013 nt):
ATGGCAGAGGTGGTGGCTGAGGTGGCCGAGATGCCAACACAGATGTCACCAGGGGCAGTGGAGATGTCAA
CACCTATGTCGGCAGAGATGATGGAGATGTCAACAGAAGTGACTGAGATGACACCTGGGGAGGCCCTTGC
CTCATCCCTCTTCTTCCAGCATCACCAGTTCATGTGCTCTGAGTGTGGCAGCCTCTATAACACACTGGAG
GAAGTCCTCTCACACCAGGAGCAGCACATGCTTGCTGTCTCAGAGGAGGAGGCACTGACCACACAGAATG
TTGGCCTGGAGCCGGAGCTGGTGCCGGGTGCTGAGGGGCCCTTCCAGTGTGGTGAATGCAGCCAGCTCAT
CCTCTCCCCTGGGGAGCTCCTGGCCCACCAGGATGCCCACCTCCGAGAGTCTGCAAACCAGATCCAATAC
CAGTGCTGGGACTGCCAGGAGCTGTTCCCCTCGCCCGAGCTGTGGGTGGCTCATCGAAAGGCCCAGCACC
TTTCTGCTACGGTAGCTGAGCCACCAGTGCCACCTCCTTTGCCTCCCCCAACACCACTGCCTCCACCTTC
TCCCCCATCCGAAGTCAAGATGGAGCCCTATGAGTGTCCTGAGTGCTCTACCCTCTGCGCCACCCCTGAG
GAGTTCTTGGAGCATCAGGGCACCCACTTTGACTCCCTAGAGAAAGAGGAGCGCAATGGGTTGGAGGAGG
AGGAAGAGGACGATGAGGAGGATGAAGAAGATGATGAAGAGATGGAGGATGAGGAGGCCATGGCAGAGGT
CGGTGATGATGCTGTGGGAGGTGACGAGTCCACAGCTGGCTGGGCTCAGGGCTGCGGGGACTGTCCCCAG
CACCAGCCCTCAGCAGGGGCTCGCCGGCAACACCGGCGGACGGCTCACAGCCCGGCATCTGCCACCCACC
CCTTCCACTGCAGCCAGTGTCAGCGCAGTTTCAGCTCCGCCAACCGGCTGCAGGCTCATGGGCGGGCCCA
TGTTGGTGGCACACATGAGTGTACAACCTGCTCCAAGGTCTTCAAGAAAGCAGCATCGCTTGAGCAGCAC
TTGCGGCTGCATCGCGGGGAAGCCCGCTACCTCTGTGTAGACTGTGGCCGCGGCTTTGGCACAGAACTCA
CGTTGGTGGCTCACCGGCGGGCCCACACTGCCAACCCATTGCATCGCTGTCGTTGCGGCAAGACGTTCAG
CAACATGACCAAGTTCCTCTACCACCGGCGCACTCACGCCGGCAAAAGCGGGGCACCTCCCACAGGAGCA
ACAGCTCCCCCAGCTCCAGCGGAGCCCACCCCTCCACCACCACCCCCTGCCCCACCTGCCCAGCTGCCCT
GCCCACAGTGCTCCAAGTCCTTTGCCTCAGCTTCCCGGCTGTCCCGGCACCGGCGTGCAGTACACGGGCC
CCCTGAACGGCGTCACCGCTGTGGGGTTTGTGGCAAGGGCTTCAAGAAGCTGATCCACGTGCGCAACCAC
CTGCGGACACACACGGGTGAGAGGCCCTTCCAGTGCCACTCATGTGGCAAGACCTTTGCTTCTTTGGCCA
ACCTCAGCCGCCACCAGCTGACCCATACGGGTGCACGTCCCTACCAATGCCTGGACTGTGGCAAGCGCTT
CACACAGAGCTCCAACCTGCAGCAGCACCGGCGGTTGCACTTGCGGCCAGTCGCCTTTGCCCGCGCCCCC
CGCCTCCCCATCACTGGTCTCTACAACAAGAGTCCCTACTACTGCGGGACTTGTGGCCGCTGGTTCCGCG
CCATGGCGGGCTTGCGACTGCATCAGCGGGTCCATGCCCGAGCTCGGACTTTGACGCTACAGCCTCCCAG
ATCACCATCTCCTGCCCCACCCCCACCTCCAGAGCCTCAACAGACTATCATGTGCACAGAGCTGGGGGAG
ACCATCGCCATCATTGAGACATCCCAGCCACTGGCGCTTGAGGACACCCTGCAGCTGTGCCAGGCTGCAC
TGGGGGCCAGTGAAGCAGGCGGGCTCTTGCAGTTGGACACGGCCTTCGTGTGA

Translation (670 aa):
MAEVVAEVAEMPTQMSPGAVEMSTPMSAEMMEMSTEVTEMTPGEALASSLFFQHHQFMCSECGSLYNTLE
EVLSHQEQHMLAVSEEEALTTQNVGLEPELVPGAEGPFQCGECSQLILSPGELLAHQDAHLRESANQIQY
QCWDCQELFPSPELWVAHRKAQHLSATVAEPPVPPPLPPPTPLPPPSPPSEVKMEPYECPECSTLCATPE
EFLEHQGTHFDSLEKEERNGLEEEEEDDEEDEEDDEEMEDEEAMAEVGDDAVGGDESTAGWAQGCGDCPQ
HQPSAGARRQHRRTAHSPASATHPFHCSQCQRSFSSANRLQAHGRAHVGGTHECTTCSKVFKKAASLEQH
LRLHRGEARYLCVDCGRGFGTELTLVAHRRAHTANPLHRCRCGKTFSNMTKFLYHRRTHAGKSGAPPTGA
TAPPAPAEPTPPPPPPAPPAQLPCPQCSKSFASASRLSRHRRAVHGPPERRHRCGVCGKGFKKLIHVRNH
LRTHTGERPFQCHSCGKTFASLANLSRHQLTHTGARPYQCLDCGKRFTQSSNLQQHRRLHLRPVAFARAP
RLPITGLYNKSPYYCGTCGRWFRAMAGLRLHQRVHARARTLTLQPPRSPSPAPPPPPEPQQTIMCTELGE
TIAIIETSQPLALEDTLQLCQAALGASEAGGLLQLDTAFV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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