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Report for CCDS12569.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12569.1 Public Homo sapiens 19 CYP2A7 24 110 108 CCDS HistoryNCBI Gene:1549Re-query CCDS DB by CCDS ID:12569.1Re-query CCDS DB by GeneID:1549See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12569.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301146.9 ENSP00000301146.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000301146.9Link to Ensembl Protein Viewer:ENSP00000301146.4Re-query CCDS DB by Nucleotide ID:ENST00000301146Re-query CCDS DB by Protein ID:ENSP00000301146
Original member Current member NCBI NM_000764.3 NP_000755.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000764.3Link to Protein Sequence:NP_000755.2Re-query CCDS DB by Nucleotide ID:NM_000764Re-query CCDS DB by Protein ID:NP_000755Link to BLAST:NP_000755.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000755.2 494 P20853 494 100% 0 0

Chromosomal Locations for CCDS 12569.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 40875693 40875874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40876527 40876668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40877190 40877377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40877852 40877993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40878760 40878936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40880084 40880244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40880479 40880628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40881589 40881751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 40882031 40882210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1485 nt):
ATGCTGGCCTCAGGGCTGCTTCTGGTGGCCTTGCTGGCCTGCCTGACTGTGATGGTCTTGATGTCTGTCT
GG
CAGCAGAGGAAGAGCAGGGGGAAGCTGCCTCCGGGACCCACCCCACTGCCCTTCATTGGAAACTACCT
C
CAGCTGAACACAGAGCACATATGTGACTCCATCATGAAGTTCAGTGAGTGCTATGGCCCCGTGTTCACC
ATT
CACTTGGGGCCCCGGCGGGTCGTGGTGCTGTGTGGACATGATGCCGTCAGGGAGGCTCTGGTGGACC
AG
GCTGAGGAGTTCAGCGGGCGAGGCGAGCAAGCCACCTTCGACTGGGTCTTCAAAGGCTATGGCGTGGC
G
TTCAGCAACGGGGAGCGCGCCAAGCAGCTCCTGCGCTTTGCCATCGCCACCCTGAGGGACTTCGGGGTG
GGC
AAGCGAGGCATCGAGGAGCGCATCCAGGAGGAGTCGGGCTTCCTCATCGAGGCCATCCGGAGCACGC
AC
GGCGCCAATATCGATCCCACCTTCTTCCTGAGCCGCACAGTCTCCAATGTCATCAGCTCCATTGTCTT
T
GGGGACCGCTTTGACTATGAGGACAAAGAGTTCCTGTCACTGCTGAGCATGATGCTAGGAATCTTCCAG
TTC
ACGTCAACCTCCACGGGGCAGCTCTATGAGATGTTCTCTTCGGTGATGAAACACCTGCCAGGACCAC
AG
CAACAGGCCTTTAAGTTGCTGCAAGGGCTGGAGGACTTCATAGCCAAGAAGGTGGAGCACAACCAGCG
C
ACGCTGGATCCCAATTCCCCACAGGACTTCATCGACTCCTTTCTCATCCACATGCAGGAGGAGGAGAAG
AAC
CCCAACACGGAGTTCTACTTGAAGAACCTGATGATGAGCACGTTGAACCTCTTCATTGCAGGCACCG
AG
ACGGTCAGCACCACCCTGCGCTATGGCTTCTTGCTGCTCATGAAGCACCCAGAGGTGGAGGCCAAGGT
C
CATGAGGAGATTGACAGAGTGATCGGCAAGAACCGGCAGCCCAAGTTTGAGGACCGGACCAAGATGCCC
TAC
ATGGAGGCAGTGATCCACGAGATCCAAAGATTTGGAGACGTGATCCCCATGAGTTTGGCCCGCAGGG
TT
AAAAAGGACACCAAGTTTCGGGATTTTTTCCTCCCTAAGGGCACCGAAGTGTTCCCTATGCTGGGCTC
C
GTGCTGAGAGACCCCAGCTTCTTCTCCAACCCTCAGGACTTCAATCCCCAGCATTTCCTGGATGACAAG
GGG
CAGTTTAAGAAGAGTGATGCTTTTGTGCCCTTTTCCATCGGAAAGCGGAACTGTTTCGGAGAAGGCC
TG
GCCAGAATGGAGCTCTTTCTCTTCTTCACCACCGTCATGCAGAACTTCCGCCTCAAGTCCTCCCAGTC
A
CCTAAGGACATTGACGTGTCCCCCAAACACGTGGTCTTTGCCACGATCCCACGAAACTACACCATGAGC
TTC
CTGCCCCGCTGA


Translation (494 aa):
MLASGLLLVALLACLTVMVLMSVWQQRKSRGKLPPGPTPLPFIGNYLQLNTEHICDSIMKFSECYGPVFT
I
HLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGY
GVAFSNGERAKQLLRFAIATLRDFGV
G
KRGIEERIQEESGFLIEAIRSTH
GANIDPTFFLSRTVSNVISSIVFGDRFDYEDKEFLSLLSMMLGIFQ
F
TSTSTGQ
LYEMFSSVMKHLPGPQQQAFKLLQGLEDFIAKKVEHNQRTLDPNSPQDFIDSFLIHMQEEEK
N
PNTEFYLKNLMMSTLNLFIAGTETVSTTLRYGFLLLMKHPEVE
AKVHEEIDRVIGKNRQPKFEDRTKMP
Y
MEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPK
GTEVFPMLGSVLRDPSFFSNPQDFNPQHFLDDK
G
QFKKSDAFVPFSI
GKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVVFATIPRNYTMS
F
LPR




Links Key
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 Genome Browser Links:   Ensembl Genome Browser
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