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Report for CCDS12035.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12035.1 Public Homo sapiens 19 HCN2 24 110 108 CCDS HistoryNCBI Gene:610Re-query CCDS DB by CCDS ID:12035.1Re-query CCDS DB by GeneID:610See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12035.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000251287.3 ENSP00000251287.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000251287.3Link to Ensembl Protein Viewer:ENSP00000251287.1Re-query CCDS DB by Nucleotide ID:ENST00000251287Re-query CCDS DB by Protein ID:ENSP00000251287
Original member Current member NCBI NM_001194.4 NP_001185.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001194.4Link to Protein Sequence:NP_001185.3Re-query CCDS DB by Nucleotide ID:NM_001194Re-query CCDS DB by Protein ID:NP_001185Link to BLAST:NP_001185.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001185.3 889 Q9UL51 889 100% 0 0

Chromosomal Locations for CCDS 12035.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 589946 590577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 603544 603967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 605061 605222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 607964 608182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 610259 610405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 613248 613488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 613852 614016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 615795 616474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2670 nt):
ATGGACGCGCGCGGGGGCGGCGGGCGGCCCGGGGAGAGCCCGGGCGCGACCCCCGCGCCGGGGCCGCCGC
CGCCGCCGCCGCCCGCGCCCCCCCAACAGCAGCCGCCGCCGCCGCCGCCGCCCGCGCCCCCCCCGGGCCC
CGGGCCCGCGCCCCCCCAGCACCCGCCCCGGGCCGAGGCGTTGCCCCCGGAGGCGGCGGATGAGGGCGGC
CCGCGGGGCCGGCTCCGCAGCCGCGACAGCTCGTGCGGCCGCCCCGGCACCCCGGGCGCGGCGAGCACGG
CCAAGGGCAGCCCGAACGGCGAGTGCGGGCGCGGCGAGCCGCAGTGCAGCCCCGCGGGGCCCGAGGGCCC
GGCGCGGGGGCCCAAGGTGTCGTTCTCGTGCCGCGGGGCGGCCTCGGGGCCCGCGCCGGGGCCGGGGCCG
GCGGAGGAGGCGGGCAGCGAGGAGGCGGGCCCGGCGGGGGAGCCGCGCGGCAGCCAGGCCAGCTTCATGC
AGCGCCAGTTCGGCGCGCTCCTGCAGCCGGGCGTCAACAAGTTCTCGCTGCGGATGTTCGGCAGCCAGAA
GGCCGTGGAGCGCGAGCAGGAGCGCGTCAAGTCGGCGGGGGCCTGGATCATCCACCCGTACAGCGACTTC
AGGTTCTACTGGGACTTCACCATGCTGCTGTTCATGGTGGGAAACCTCATCATCATCCCAGTGGGCATCA
CCTTCTTCAAGGATGAGACCACTGCCCCGTGGATCGTGTTCAACGTGGTCTCGGACACCTTCTTCCTCAT
GGACCTGGTGTTGAACTTCCGCACCGGCATTGTGATCGAGGACAACACGGAGATCATCCTGGACCCCGAG
AAGATCAAGAAGAAGTATCTGCGCACGTGGTTCGTGGTGGACTTCGTGTCCTCCATCCCCGTGGACTACA
TCTTCCTTATCGTGGAGAAGGGCATTGACTCCGAGGTCTACAAGACGGCACGCGCCCTGCGCATCGTGCG
CTTCACCAAGATCCTCAGCCTCCTGCGGCTGCTGCGCCTCTCACGCCTGATCCGCTACATCCATCAGTGG
GAGGAGATCTTCCACATGACCTATGACCTGGCCAGCGCGGTGATGAGGATCTGCAATCTCATCAGCATGA
TGCTGCTGCTCTGCCACTGGGACGGCTGCCTGCAGTTCCTGGTGCCTATGCTGCAGGACTTCCCGCGCAA
CTGCTGGGTGTCCATCAATGGCATGGTGAACCACTCGTGGAGTGAACTGTACTCCTTCGCACTCTTCAAG
GCCATGAGCCACATGCTGTGCATCGGGTACGGCCGGCAGGCGCCCGAGAGCATGACGGACATCTGGCTGA
CCATGCTCAGCATGATTGTGGGTGCCACCTGCTACGCCATGTTCATCGGCCACGCCACTGCCCTCATCCA
GTCGCTGGACTCCTCGCGGCGCCAGTACCAGGAGAAGTACAAGCAGGTGGAGCAGTACATGTCCTTCCAC
AAGCTGCCAGCTGACTTCCGCCAGAAGATCCACGACTACTATGAGCACCGTTACCAGGGCAAGATGTTTG
ACGAGGACAGCATCCTGGGCGAGCTCAACGGGCCCCTGCGGGAGGAGATCGTCAACTTCAACTGCCGGAA
GCTGGTGGCCTCCATGCCGCTGTTCGCCAACGCCGACCCCAACTTCGTCACGGCCATGCTGACCAAGCTC
AAGTTCGAGGTCTTCCAGCCGGGTGACTACATCATCCGCGAAGGCACCATCGGGAAGAAGATGTACTTCA
TCCAGCACGGCGTGGTCAGCGTGCTCACTAAGGGCAACAAGGAGATGAAGCTGTCCGATGGCTCCTACTT
CGGGGAGATCTGCCTGCTCACCCGGGGCCGCCGCACGGCGAGCGTGCGGGCTGACACCTACTGCCGCCTC
TATTCGCTGAGCGTGGACAACTTCAACGAGGTGCTGGAGGAGTACCCCATGATGCGGCGCGCCTTCGAGA
CGGTGGCCATCGACCGCCTGGACCGCATCGGCAAGAAGAATTCCATCCTCCTGCACAAGGTGCAGCATGA
CCTCAACTCGGGCGTATTCAACAACCAGGAGAACGCCATCATCCAGGAGATCGTCAAGTACGACCGCGAG
ATGGTGCAGCAGGCCGAGCTGGGTCAGCGCGTGGGCCTCTTCCCGCCGCCGCCGCCGCCGCCGCAGGTCA
CCTCGGCCATCGCCACGCTGCAGCAGGCGGCGGCCATGAGCTTCTGCCCGCAGGTGGCGCGGCCGCTCGT
GGGGCCGCTGGCGCTCGGCTCGCCGCGCCTCGTGCGCCGCCCGCCCCCGGGGCCCGCACCTGCCGCCGCC
TCACCCGGGCCCCCGCCCCCCGCCAGCCCCCCGGGCGCGCCCGCCAGCCCCCGGGCACCGCGGACCTCGC
CCTACGGCGGCCTGCCCGCCGCCCCCCTTGCTGGGCCCGCCCTGCCCGCGCGCCGCCTGAGCCGCGCGTC
GCGCCCACTGTCCGCCTCGCAGCCCTCGCTGCCTCACGGCGCCCCCGGCCCCGCGGCCTCCACACGCCCG
GCCAGCAGCTCCACACCGCGCTTGGGGCCCACGCCCGCTGCCCGGGCCGCCGCGCCCAGCCCGGACCGCA
GGGACTCGGCCTCACCCGGCGCCGCCGGCGGCCTGGACCCCCAGGACTCCGCGCGCTCGCGCCTCTCGTC
CAACTTGTGA

Translation (889 aa):
MDARGGGGRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADEGG
PRGRLRSRDSSCGRPGTPGAASTAKGSPNGECGRGEPQCSPAGPEGPARGPKVSFSCRGAASGPAPGPGP
AEEAGSEEAGPAGEPRGSQASFMQRQFGALLQPGVNKFSLRMFGSQKAVEREQERVKSAGAWIIHPYSDF
RFYWDFTMLLFMVGNLIIIPVGITFFKDETTAPWIVFNVVSDTFFLMDLVLNFRTGIVIEDNTEIILDPE
KIKKKYLRTWFVVDFVSSIPVDYIFLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQW
EEIFHMTYDLASAVMRICNLISMMLLLCHWDGCLQFLVPMLQDFPRNCWVSINGMVNHSWSELYSFALFK
AMSHMLCIGYGRQAPESMTDIWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFH
KLPADFRQKIHDYYEHRYQGKMFDEDSILGELNGPLREEIVNFNCRKLVASMPLFANADPNFVTAMLTKL
KFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKEMKLSDGSYFGEICLLTRGRRTASVRADTYCRL
YSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLHKVQHDLNSGVFNNQENAIIQEIVKYDRE
MVQQAELGQRVGLFPPPPPPPQVTSAIATLQQAAAMSFCPQVARPLVGPLALGSPRLVRRPPPGPAPAAA
SPGPPPPASPPGAPASPRAPRTSPYGGLPAAPLAGPALPARRLSRASRPLSASQPSLPHGAPGPAASTRP
ASSSTPRLGPTPAARAAAPSPDRRDSASPGAAGGLDPQDSARSRLSSNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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