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Report for CCDS10372.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10372.1 Public Homo sapiens 15 ST8SIA2 24 110 108 CCDS HistoryNCBI Gene:8128Re-query CCDS DB by CCDS ID:10372.1Re-query CCDS DB by GeneID:8128See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10372.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000268164.8 ENSP00000268164.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000268164.8Link to Ensembl Protein Viewer:ENSP00000268164.3Re-query CCDS DB by Nucleotide ID:ENST00000268164Re-query CCDS DB by Protein ID:ENSP00000268164
Original member Current member NCBI NM_006011.4 NP_006002.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006011.4Link to Protein Sequence:NP_006002.1Re-query CCDS DB by Nucleotide ID:NM_006011Re-query CCDS DB by Protein ID:NP_006002Link to BLAST:NP_006002.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006002.1 375 Q92186 375 100% 0 0

Chromosomal Locations for CCDS 10372.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 92394065 92394162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 92430049 92430111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 92434247 92434375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 92438353 92438610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 92444636 92444929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 92464100 92464385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1128 nt):
ATGCAGCTGCAGTTCCGGAGCTGGATGCTGGCCGCGCTCACGCTGCTCGTGGTCTTCCTCATCTTCGCAG
ACATCTCAGAGATCGAAGAAGAAATCGGGAATTCGGGAGGCAGAGGTACAATCAGATCAGCTGTGAACAG
CTTACATAGCAAATCTAATAGAGCTGAAGTTGTAATAAACGGCTCCTCATCACCAGCTGTTGTTGACAGA
AGTAATGAAAGCATCAAGCACAACATCCAGCCAGCCTCGTCCAAATGGAGACATAACCAGACGCTCTCTC
TGAGGATCAGGAAGCAGATTTTAAAGTTCTTGGATGCTGAAAAGGACATTTCTGTCCTAAAGGGAACCCT
GAAGCCTGGAGATATTATTCATTACATCTTCGATCGAGACAGCACCATGAATGTGTCCCAGAACCTCTAC
GAGCTCCTCCCCAGGACTTCGCCACTGAAGAATAAGCACTTTGGGACTTGTGCCATCGTGGGCAACTCGG
GGGTCTTGCTGAACAGCGGCTGTGGGCAGGAGATTGACGCCCACAGCTTCGTCATCAGGTGCAACCTGGC
CCCAGTACAGGAGTATGCCCGGGATGTGGGGCTCAAGACAGACCTGGTAACCATGAACCCCTCGGTCATC
CAGCGGGCCTTTGAGGACTTGGTCAATGCCACGTGGCGGGAGAAGCTGCTGCAACGGCTGCACAGCCTCA
ATGGCAGCATCCTGTGGATCCCTGCCTTCATGGCCCGGGGCGGCAAGGAGCGTGTTGAGTGGGTCAACGA
GCTTATCCTGAAGCACCACGTCAACGTGCGCACTGCATACCCCTCGCTGCGCCTGCTGCACGCCGTTCGC
GGATACTGGCTGACCAACAAAGTCCACATCAAAAGACCCACCACCGGCCTCTTGATGTATACCCTGGCCA
CACGTTTCTGCAAACAAATCTACCTCTACGGCTTCTGGCCCTTTCCGCTGGATCAGAACCAGAACCCAGT
CAAGTACCACTATTATGACAGCCTCAAGTATGGCTACACCTCCCAGGCCAGCCCGCATACCATGCCCTTG
GAGTTTAAGGCCCTCAAGAGCCTACATGAGCAGGGGGCTTTGAAACTGACTGTCGGCCAGTGCGATGGGG
CCACGTAG

Translation (375 aa):
MQLQFRSWMLAALTLLVVFLIFADISEIEEEIGNSGGRGTIRSAVNSLHSKSNRAEVVINGSSSPAVVDR
SNESIKHNIQPASSKWRHNQTLSLRIRKQILKFLDAEKDISVLKGTLKPGDIIHYIFDRDSTMNVSQNLY
ELLPRTSPLKNKHFGTCAIVGNSGVLLNSGCGQEIDAHSFVIRCNLAPVQEYARDVGLKTDLVTMNPSVI
QRAFEDLVNATWREKLLQRLHSLNGSILWIPAFMARGGKERVEWVNELILKHHVNVRTAYPSLRLLHAVR
GYWLTNKVHIKRPTTGLLMYTLATRFCKQIYLYGFWPFPLDQNQNPVKYHYYDSLKYGYTSQASPHTMPL
EFKALKSLHEQGALKLTVGQCDGAT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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