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Report for CCDS10215.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10215.1 Public Homo sapiens 15 TIPIN 24 110 108 CCDS HistoryNCBI Gene:54962Re-query CCDS DB by CCDS ID:10215.1Re-query CCDS DB by GeneID:54962See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10215.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261881.9 ENSP00000261881.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261881.9Link to Ensembl Protein Viewer:ENSP00000261881.4Re-query CCDS DB by Nucleotide ID:ENST00000261881Re-query CCDS DB by Protein ID:ENSP00000261881
Original member Current member NCBI NM_001398281.1 NP_001385210.1 Accepted alive Link to Nucleotide Sequence:NM_001398281.1Link to Protein Sequence:NP_001385210.1Re-query CCDS DB by Nucleotide ID:NM_001398281Re-query CCDS DB by Protein ID:NP_001385210Link to BLAST:NP_001385210.1
Original member Current member NCBI NM_001398282.1 NP_001385211.1 Accepted alive Link to Nucleotide Sequence:NM_001398282.1Link to Protein Sequence:NP_001385211.1Re-query CCDS DB by Nucleotide ID:NM_001398282Re-query CCDS DB by Protein ID:NP_001385211Link to BLAST:NP_001385211.1
Original member Current member NCBI NM_001398283.1 NP_001385212.1 Accepted alive Link to Nucleotide Sequence:NM_001398283.1Link to Protein Sequence:NP_001385212.1Re-query CCDS DB by Nucleotide ID:NM_001398283Re-query CCDS DB by Protein ID:NP_001385212Link to BLAST:NP_001385212.1
Original member Current member NCBI NM_001398284.1 NP_001385213.1 Accepted alive Link to Nucleotide Sequence:NM_001398284.1Link to Protein Sequence:NP_001385213.1Re-query CCDS DB by Nucleotide ID:NM_001398284Re-query CCDS DB by Protein ID:NP_001385213Link to BLAST:NP_001385213.1
Original member Current member NCBI NM_017858.3 NP_060328.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017858.3Link to Protein Sequence:NP_060328.3Re-query CCDS DB by Nucleotide ID:NM_017858Re-query CCDS DB by Protein ID:NP_060328Link to BLAST:NP_060328.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001385210.1 301 Q9BVW5 301 100% 0 0
NP_001385211.1 301 Q9BVW5 301 100% 0 0
NP_001385212.1 301 Q9BVW5 301 100% 0 0
NP_001385213.1 301 Q9BVW5 301 100% 0 0
NP_060328.3 301 Q9BVW5 301 100% 0 0

Chromosomal Locations for CCDS 10215.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 66336958 66337181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66341150 66341356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66349060 66349123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66349315 66349437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66351525 66351600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66352129 66352207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66352815 66352947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (906 nt):
ATGCTAGAACCACAGGAGAATGGCGTGATTGACCTACCAGATTATGAGCATGTAGAAGATGAAACTTTTC
CTCCTTTCCCACCTCCAGCCTCTCCAGAGAGACAAGATGGTGAAGGAACTGAGCCTGATGAAGAGTCAGG
AAATGGAGCACCTGTTCGTGTACCTCCAAAGAGAACAGTTAAAAGAAATATACCCAAGCTGGATGCTCAG
AGATTAATTTCAGAGAGAGGACTTCCAGCCTTAAGGCATGTATTTGATAAGGCAAAATTCAAAGGTAAAG
GTCATGAGGCTGAAGACTTGAAGATGCTAATCAGACACATGGAGCACTGGGCACATAGGCTATTCCCTAA
ACTGCAGTTTGAGGATTTTATTGACAGAGTTGAATACCTGGGAAGTAAAAAGGAAGTTCAGACCTGTTTA
AAACGAATTCGACTTGATCTCCCTATTTTACATGAAGATTTTGTTAGCAATAATGATGAAGTTGCGGAGA
ATAATGAACATGATGTCACTTCTACTGAATTAGATCCCTTTCTGACAAACTTATCTGAAAGTGAGATGTT
TGCTTCTGAGTTAAGTAGAAGCCTAACAGAAGAGCAACAACAAAGAATTGAGAGAAATAAACAACTGGCC
TTGGAAAGAAGGCAGGCAAAGCTGCTGAGTAATAGTCAGACCCTAGGAAATGATATGTTAATGAATACAC
CCAGGGCACACACGGTTGAAGAGGTTAATACTGATGAGGATCAAAAGGAGGAGTCAAATGGATTAAACGA
AGACATTCTGGACAATCCATGTAATGATGCTATTGCCAATACTTTAAATGAAGAGGAAACACTGCTGGAC
CAGTCTTTTAAAAATGTGCAACAGCAACTTGATGCTACATCCAGAAATATTACTGAAGCTAGATAA

Translation (301 aa):
MLEPQENGVIDLPDYEHVEDETFPPFPPPASPERQDGEGTEPDEESGNGAPVRVPPKRTVKRNIPKLDAQ
RLISERGLPALRHVFDKAKFKGKGHEAEDLKMLIRHMEHWAHRLFPKLQFEDFIDRVEYLGSKKEVQTCL
KRIRLDLPILHEDFVSNNDEVAENNEHDVTSTELDPFLTNLSESEMFASELSRSLTEEQQQRIERNKQLA
LERRQAKLLSNSQTLGNDMLMNTPRAHTVEEVNTDEDQKEESNGLNEDILDNPCNDAIANTLNEEETLLD
QSFKNVQQQLDATSRNITEAR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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