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Report for CCDS998.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
998.1 Public Homo sapiens 1 POGZ 24 110 108 CCDS HistoryNCBI Gene:23126Re-query CCDS DB by CCDS ID:998.1Re-query CCDS DB by GeneID:23126See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 998.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000392723.6 ENSP00000376484.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392723.6Link to Ensembl Protein Viewer:ENSP00000376484.1Re-query CCDS DB by Nucleotide ID:ENST00000392723Re-query CCDS DB by Protein ID:ENSP00000376484
Original member Current member NCBI NM_207171.2 NP_997054.1 Accepted alive Link to Nucleotide Sequence:NM_207171.2Link to Protein Sequence:NP_997054.1Re-query CCDS DB by Nucleotide ID:NM_207171Re-query CCDS DB by Protein ID:NP_997054Link to BLAST:NP_997054.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997054.1 1357 Q7Z3K3-2 1357 100% 0 0

Chromosomal Locations for CCDS 998.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 151404802 151406464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151406607 151406631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151406911 151407023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151407235 151407291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151408100 151408240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151408409 151408581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151408694 151408828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151411625 151411771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151412296 151412396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151423397 151423551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151423949 151424286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151424955 151425061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151427823 151428041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151428123 151428413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151429603 151429711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151430666 151430841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151442081 151442204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4074 nt):
ATGGCGGACACCGACCTGTTCATGGAATGTGAGGAGGAGGAGTTGGAGCCATGGCAGAAAATCAGTGATG
TCATTGAGGACTCTGTAGTTGAAGATTATAATTCAGTGGATAAAACTACCACAGCTGGCAATCCTTTGGT
CCAGCAAGGTGGACAGCCACTCATCCTGACCCAGAATCCAGCCCCAGGTCTGGGCACAATGGTTACTCAA
CCAGTATTGAGGCCTGTTCAGGTCATGCAGAATGCCAATCATGTGACTAGTTCCCCTGTGGCCTCACAAC
CAATATTTATCACTACGCAGGGATTTCCTGTAAGGAATGTCCGGCCTGTACAAAATGCAATGAATCAGGT
TGGGATTGTGCTGAACGTACAGCAAGGCCAAACGGTTAGACCAATTACACTAGTTCCAGCCCCAGGTACC
CAGTTTGTTAAGCCGACAGTTGGAGTTCCACAAGTGTTCTCCCAGATGACCCCTGTGAGGCCAGGCTCCA
CAATGCCTGTGAGGCCCACCACCAACACCTTCACCACCGTCATCCCGGCCACTCTTACCATTCGAAGCAC
CGTCCCACAGTCCCAGTCCCAGCAGACCAAGTCCACTCCCAGCACTTCTACCACTCCCACTGCCACACAG
CCAACCTCACTGGGGCAACTAGCTGTTCAGTCTCCAGGCCAGTCAAACCAGACCACGAATCCCAAGCTAG
CTCCCTCCTTCCCCTCTCCACCTGCAGTGAGCATTGCCAGCTTTGTCACTGTGAAGCGACCTGGTGTTAC
AGGCGAAAATAGCAATGAAGTGGCCAAATTGGTGAATACCCTTAACACCATCCCTTCCCTGGGCCAGAGT
CCTGGGCCAGTGGTGGTGTCCAACAACAGCTCTGCTCATGGCTCTCAAAGAACCAGCGGACCTGAGTCTT
CAATGAAAGTGACCTCTTCCATCCCAGTATTTGACCTCCAGGATGGTGGACGGAAAATATGTCCACGATG
TAATGCTCAATTTCGTGTTACTGAAGCTTTGAGAGGTCACATGTGTTACTGTTGCCCAGAAATGGTTGAA
TACCAGAAGAAAGGAAAGTCCCTGGATTCAGAACCCAGTGTCCCATCAGCAGCAAAGCCCCCATCCCCTG
AGAAAACAGCTCCTGTTGCTTCCACACCCTCTTCTACACCTATTCCTGCTCTGTCACCGCCTACCAAAGT
ACCAGAACCAAATGAGAACGTGGGCGATGCCGTCCAGACCAAACTCATTATGCTTGTAGATGACTTCTAC
TATGGACGGGATGGTGGCAAAGTAGCCCAGCTCACAAATTTCCCTAAGGTCGCCACATCTTTCCGATGCC
CACATTGTACCAAAAGGCTAAAAAACAATATTCGATTCATGAACCATATGAAACACCACGTAGAACTCGA
TCAGCAGAACGGTGAGGTAGATGGTCACACTATCTGCCAGCACTGTTACCGCCAGTTTTCCACTCCCTTC
CAGCTTCAGTGCCACTTGGAAAATGTTCATAGTCCCTATGAATCTACTACCAAGTGCAAGATCTGTGAAT
GGGCGTTTGAAAGTGAGCCACTATTTCTCCAGCATATGAAGGATACTCATAAGCCTGGAGAGATGCCTTA
TGTTTGCCAGGTGTGTCAATATCGCTCCTCACTCTACTCTGAGGTAGATGTCCATTTTCGGATGATCCAT
GAGGATACCCGGCATCTGCTCTGCCCTTATTGCCTGAAGGTCTTCAAAAATGGCAATGCATTCCAACAGC
ATTACATGAGGCACCAGAAGAGAAATGTTTATCACTGCAACAAATGCCGGCTGCAGTTTCTCTTTGCCAA
GGACAAAATTGAACACAAGCTTCAACACCATAAAACCTTCCGTAAACCCAAGCAGCTGGAGGGCTTGAAA
CCAGGCACCAAGGTGACAATCCGGGCTTCCCGAGGGCAGCCACGAACTGTTCCTGTATCCTCTAATGATA
CACCTCCCAGCGCCTTGCAGGAGGCAGCACCGCTGACCTCCTCAATGGACCCTCTGCCTGTCTTCCTTTA
TCCCCCTGTCCAGCGCAGCATCCAGAAGAGAGCTGTTAGGAAAATGAGTGTCATGGGCCGGCAGACATGC
CTGGAGTGCAGCTTCGAGATCCCAGACTTCCCTAATCATTTCCCTACTTACGTACACTGCTCTCTGTGTC
GCTATAGCACCTGCTGTTCTCGAGCTTATGCCAACCACATGATCAACAATCATGTTCCACGGAAGAGCCC
CAAGTATTTGGCTTTGTTTAAAAATTCTGTGAGTGGAATCAAGCTGGCCTGCACTTCATGTACCTTTGTT
ACCTCTGTGGGCGATGCTATGGCCAAGCATTTGGTATTCAACCCCTCTCACAGATCCAGCAGCATCCTGC
CACGGGGACTCACTTGGATAGCTCACTCAAGGCATGGCCAGACTCGTGACCGAGTGCATGACCGGAACGT
GAAGAATATGTACCCTCCTCCTTCCTTCCCCACTAACAAAGCTGCCACTGTGAAATCTGCGGGGGCCACC
CCAGCTGAGCCTGAAGAGCTACTAACTCCCTTAGCCCCAGCACTCCCATCACCAGCCTCAACTGCAACCC
CACCACCAACCCCCACTCACCCGCAGGCTTTAGCCCTTCCACCGCTGGCTACAGAGGGAGCCGAATGTCT
GAATGTTGATGATCAGGATGAAGGGAGCCCAGTCACCCAAGAACCTGAGCTAGCATCAGGTGGTGGTGGT
AGTGGTGGAGTTGGCAAAAAGGAGCAGCTGTCTGTGAAGAAGCTTCGAGTAGTACTGTTTGCTCTATGCT
GCAATACAGAACAGGCAGCTGAACACTTCCGAAATCCCCAGCGACGTATTCGCCGTTGGCTTCGACGTTT
CCAGGCCTCCCAGGGGGAGAATCTAGAGGGCAAATATCTGAGCTTTGAGGCAGAAGAGAAACTGGCTGAG
TGGGTGCTAACCCAGCGCGAACAACAGCTACCTGTAAATGAGGAGACCTTGTTCCAGAAGGCCACCAAAA
TAGGACGTTCTTTGGAAGGGGGGTTTAAGATCTCCTATGAGTGGGCTGTGCGTTTCATGCTGCGGCACCA
CCTGACTCCCCATGCCCGGCGAGCTGTGGCCCACACCCTACCTAAGGATGTAGCAGAGAATGCAGGACTC
TTCATTGATTTTGTACAACGGCAGATTCACAACCAGGACTTACCCTTGTCTATGATTGTGGCTATTGATG
AGATCTCTTTGTTCCTGGATACAGAGGTGCTGAGCAGTGATGATCGAAAGGAGAATGCCCTGCAGACAGT
GGGCACAGGGGAACCTTGGTGTGATGTAGTCCTAGCCATTCTGGCAGATGGCACTGTCCTTCCCACCCTG
GTTTTCTACAGAGGGCAGATGGATCAGCCTGCTAACATGCCAGACTCCATATTGCTAGAGGCAAAGGAGA
GTGGCTACAGTGATGACGAGATCATGGAGCTGTGGTCAACTCGAGTGTGGCAGAAGCACACAGCTTGCCA
GCGCAGCAAAGGCATGCTTGTGATGGACTGTCATCGCACTCACTTGTCAGAAGAGGTACTGGCTATGCTT
AGTGCCTCTAGCACTTTGCCTGCAGTGGTCCCAGCAGGCTGTAGCTCCAAAATTCAGCCATTAGATGTAT
GCATCAAAAGAACTGTCAAGAACTTCCTGCATAAAAAATGGAAGGAACAGGCTCGGGAAATGGCAGATAC
TGCATGTGATTCTGATGTCCTGCTTCAGCTGGTGCTTGTCTGGCTGGGTGAAGTGCTAGGTGTCATTGGG
GACTGTCCAGAGCTAGTTCAGCGCTCCTTCCTGGTGGCTAGTGTTCTGCCTGGCCCCGATGGCAACATTA
ACTCACCTACAAGAAATGCTGACATGCAGGAGGAGCTAATTGCCTCCCTAGAGGAGCAACTGAAGCTGAG
TGGGGAACATTCTGAGTCTTCCACTCCACGACCCAGATCATCTCCTGAAGAGACAATTGAGCCTGAAAGT
CTTCACCAGCTCTTTGAGGGTGAAAGTGAGACCGAGTCTTTCTATGGCTTTGAAGAAGCTGACCTAGATC
TGATGGAGATTTGA

Translation (1357 aa):
MADTDLFMECEEEELEPWQKISDVIEDSVVEDYNSVDKTTTAGNPLVQQGGQPLILTQNPAPGLGTMVTQ
PVLRPVQVMQNANHVTSSPVASQPIFITTQGFPVRNVRPVQNAMNQVGIVLNVQQGQTVRPITLVPAPGT
QFVKPTVGVPQVFSQMTPVRPGSTMPVRPTTNTFTTVIPATLTIRSTVPQSQSQQTKSTPSTSTTPTATQ
PTSLGQLAVQSPGQSNQTTNPKLAPSFPSPPAVSIASFVTVKRPGVTGENSNEVAKLVNTLNTIPSLGQS
PGPVVVSNNSSAHGSQRTSGPESSMKVTSSIPVFDLQDGGRKICPRCNAQFRVTEALRGHMCYCCPEMVE
YQKKGKSLDSEPSVPSAAKPPSPEKTAPVASTPSSTPIPALSPPTKVPEPNENVGDAVQTKLIMLVDDFY
YGRDGGKVAQLTNFPKVATSFRCPHCTKRLKNNIRFMNHMKHHVELDQQNGEVDGHTICQHCYRQFSTPF
QLQCHLENVHSPYESTTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQYRSSLYSEVDVHFRMIH
EDTRHLLCPYCLKVFKNGNAFQQHYMRHQKRNVYHCNKCRLQFLFAKDKIEHKLQHHKTFRKPKQLEGLK
PGTKVTIRASRGQPRTVPVSSNDTPPSALQEAAPLTSSMDPLPVFLYPPVQRSIQKRAVRKMSVMGRQTC
LECSFEIPDFPNHFPTYVHCSLCRYSTCCSRAYANHMINNHVPRKSPKYLALFKNSVSGIKLACTSCTFV
TSVGDAMAKHLVFNPSHRSSSILPRGLTWIAHSRHGQTRDRVHDRNVKNMYPPPSFPTNKAATVKSAGAT
PAEPEELLTPLAPALPSPASTATPPPTPTHPQALALPPLATEGAECLNVDDQDEGSPVTQEPELASGGGG
SGGVGKKEQLSVKKLRVVLFALCCNTEQAAEHFRNPQRRIRRWLRRFQASQGENLEGKYLSFEAEEKLAE
WVLTQREQQLPVNEETLFQKATKIGRSLEGGFKISYEWAVRFMLRHHLTPHARRAVAHTLPKDVAENAGL
FIDFVQRQIHNQDLPLSMIVAIDEISLFLDTEVLSSDDRKENALQTVGTGEPWCDVVLAILADGTVLPTL
VFYRGQMDQPANMPDSILLEAKESGYSDDEIMELWSTRVWQKHTACQRSKGMLVMDCHRTHLSEEVLAML
SASSTLPAVVPAGCSSKIQPLDVCIKRTVKNFLHKKWKEQAREMADTACDSDVLLQLVLVWLGEVLGVIG
DCPELVQRSFLVASVLPGPDGNINSPTRNADMQEELIASLEEQLKLSGEHSESSTPRPRSSPEETIEPES
LHQLFEGESETESFYGFEEADLDLMEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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