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Report for CCDS9886.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9886.1 Public Homo sapiens 14 TTC8 24 110 108 CCDS HistoryNCBI Gene:123016Re-query CCDS DB by CCDS ID:9886.1Re-query CCDS DB by GeneID:123016See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9886.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000346301.8 ENSP00000298324.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000346301.8Link to Ensembl Protein Viewer:ENSP00000298324.6Re-query CCDS DB by Nucleotide ID:ENST00000346301Re-query CCDS DB by Protein ID:ENSP00000298324
Original member Current member NCBI NM_198310.3 NP_938052.1 Accepted alive Link to Nucleotide Sequence:NM_198310.3Link to Protein Sequence:NP_938052.1Re-query CCDS DB by Nucleotide ID:NM_198310Re-query CCDS DB by Protein ID:NP_938052Link to BLAST:NP_938052.1

Chromosomal Locations for CCDS 9886.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 88824708 88824821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88839452 88839572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88840865 88840928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88841037 88841196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88843806 88843850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88852971 88853056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88857190 88857277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88861222 88861332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88870059 88870198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88871549 88871723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88872330 88872452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88875026 88875109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 88877294 88877410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1428 nt):
ATGAGCTCGGAGATGGAGCCGCTGCTCCTGGCCTGGAGCTATTTTAGGCGCAGGAAGTTCCAGCTCTGCG
CCGATCTATGCACGCAGATGCTGGAGAAGTCCCCTTATGACCAGGCAGCTTGGATCTTAAAAGCAAGAGC
GCTAACAGAAATGGTATACATAGATGAAATTGATGTAGATCAGGAAGGAATTGCAGAAATGATGCTGGAT
GAAAATGCTATAGCTCAAGTTCCACGCCCTGGAACGTCTTTGAAACTCCCTGGAACTAATCAGACAGGAG
GGCCTAGCCAGGCCGTTAGGCCAATCACACAAGCTGGAAGACCCATTACAGGTTTCCTCAGGCCCAGCAC
GCAGAGTGGAAGGCCAGGCACTATGGAACAGGCTATCAGAACACCCAGAACCGCCTACACAGCCCGCCCT
ATCACCAGCTCCTCCGGAAGATTTGTCAGGCTGGGAACGGCTTTGTTTGAGTATATCTTTCATCATGAAA
ATGATGTTAAGACTGCTTTGGATCTGGCTGCCCTCTCCACAGAACATTCTCAGTACAAGGACTGGTGGTG
GAAAGTACAGATTGGAAAATGTTACTACAGGTTGGGAATGTATCGTGAAGCAGAAAAACAGTTTAAATCA
GCCCTGAAGCAGCAGGAAATGGTAGATACATTTCTGTACTTGGCAAAAGTTTATGTCTCATTGGATCAAC
CTGTGACTGCTTTAAATCTTTTCAAACAAGGCTTAGATAAGTTTCCAGGAGAAGTAACCCTGCTCTGTGG
AATTGCAAGAATCTATGAGGAAATGAACAATATGTCATCAGCAGCAGAATATTACAAAGAAGTTTTGAAA
CAAGACAATACTCATGTGGAAGCCATCGCATGCATTGGAAGCAACCACTTCTATTCTGATCAGCCAGAAA
TAGCTCTCCGGTTTTACAGGCGGCTGCTGCAGATGGGCATTTATAACGGCCAGCTTTTTAACAATCTGGG
GCTGTGTTGCTTCTATGCCCAGCAGTATGATATGACTCTGACCTCATTTGAACGTGCCCTTTCTTTGGCT
GAAAATGAAGAAGAGGCAGCTGATGTCTGGTACAACTTGGGACATGTAGCTGTGGGAATAGGAGATACAA
ATTTGGCCCATCAGTGCTTCAGGCTGGCTCTGGTCAACAACAACAACCACGCCGAGGCCTACAACAACCT
GGCTGTGCTGGAGATGCGGAAGGGCCACGTTGAACAGGCAAGGGCACTATTACAAACTGCATCATCATTA
GCACCCCATATGTATGAACCGCATTTTAATTTTGCAACAATCTCTGATAAGATTGGAGATCTGCAGAGAA
GCTATGTTGCTGCGCAGAAGTCTGAAGCAGCATTTCCAGACCATGTGGACACACAACATTTAATTAAACA
ATTAAGGCAGCATTTTGCTATGCTCTGA

Translation (475 aa):
MSSEMEPLLLAWSYFRRRKFQLCADLCTQMLEKSPYDQAAWILKARALTEMVYIDEIDVDQEGIAEMMLD
ENAIAQVPRPGTSLKLPGTNQTGGPSQAVRPITQAGRPITGFLRPSTQSGRPGTMEQAIRTPRTAYTARP
ITSSSGRFVRLGTALFEYIFHHENDVKTALDLAALSTEHSQYKDWWWKVQIGKCYYRLGMYREAEKQFKS
ALKQQEMVDTFLYLAKVYVSLDQPVTALNLFKQGLDKFPGEVTLLCGIARIYEEMNNMSSAAEYYKEVLK
QDNTHVEAIACIGSNHFYSDQPEIALRFYRRLLQMGIYNGQLFNNLGLCCFYAQQYDMTLTSFERALSLA
ENEEEAADVWYNLGHVAVGIGDTNLAHQCFRLALVNNNNHAEAYNNLAVLEMRKGHVEQARALLQTASSL
APHMYEPHFNFATISDKIGDLQRSYVAAQKSEAAFPDHVDTQHLIKQLRQHFAML


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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