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Report for CCDS9819.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9819.1 Public Homo sapiens 14 MIDEAS 24 110 108 CCDS HistoryNCBI Gene:91748Re-query CCDS DB by CCDS ID:9819.1Re-query CCDS DB by GeneID:91748See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9819.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000286523.9 ENSP00000286523.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000286523.9Link to Ensembl Protein Viewer:ENSP00000286523.5Re-query CCDS DB by Nucleotide ID:ENST00000286523Re-query CCDS DB by Protein ID:ENSP00000286523
Original member Current member EBI ENST00000394071.6 ENSP00000377634.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394071.6Link to Ensembl Protein Viewer:ENSP00000377634.2Re-query CCDS DB by Nucleotide ID:ENST00000394071Re-query CCDS DB by Protein ID:ENSP00000377634
Original member Current member NCBI NM_001043318.3 NP_001036783.1 Accepted alive Link to Nucleotide Sequence:NM_001043318.3Link to Protein Sequence:NP_001036783.1Re-query CCDS DB by Nucleotide ID:NM_001043318Re-query CCDS DB by Protein ID:NP_001036783Link to BLAST:NP_001036783.1
Original member Current member NCBI NM_194278.4 NP_919254.2 Accepted alive Link to Nucleotide Sequence:NM_194278.4Link to Protein Sequence:NP_919254.2Re-query CCDS DB by Nucleotide ID:NM_194278Re-query CCDS DB by Protein ID:NP_919254Link to BLAST:NP_919254.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001036783.1 1045 Q6PJG2 1045 100% 0 0
NP_919254.2 1045 Q6PJG2 1045 100% 0 0

Chromosomal Locations for CCDS 9819.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 73719301 73719501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73721297 73721509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73722698 73722847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73725272 73725360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73726033 73726108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73726604 73726707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73726830 73726972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73727458 73727524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73729640 73729985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73736998 73737297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 73738560 73740008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3138 nt):
ATGAACCTCCAGGCCCAGCCCAAGGCTCAGAACAAGCGGAAGCGTTGCCTCTTCGGGGGCCAGGAACCAG
CTCCCAAGGAGCAGCCCCCTCCCCTGCAGCCCCCCCAGCAGTCCATCAGAGTGAAGGAGGAGCAGTACCT
CGGGCACGAGGGTCCAGGAGGGGCAGTCTCCACCTCTCAGCCTGTGGAACTGCCCCCTCCTAGCAGCCTG
GCCCTGCTGAACTCTGTGGTATATGGGCCTGAGCGGACCTCAGCAGCCATGCTGTCCCAGCAGGTGGCCT
CAGTAAAGTGGCCCAACTCTGTGATGGCTCCAGGGCGGGGCCCGGAGCGTGGAGGAGGTGGGGGTGTCAG
TGACAGCAGCTGGCAGCAGCAGCCAGGCCAGCCTCCACCCCATTCAACATGGAACTGCCACAGTCTGTCC
CTCTACAGTGCAACCAAGGGGAGCCCGCATCCTGGAGTGGGAGTCCCGACTTACTATAACCACCCTGAGG
CACTGAAGCGGGAGAAAGCGGGGGGCCCACAGCTGGACCGCTATGTGCGACCAATGATGCCACAGAAGGT
GCAGCTGGAGGTAGGGCGGCCCCAGGCACCCCTGAATTCTTTCCACGCAGCCAAGAAACCCCCAAACCAG
TCACTGCCCCTGCAACCCTTCCAGCTGGCATTCGGCCACCAGGTGAACCGGCAGGTCTTCCGGCAGGGCC
CACCGCCCCCAAACCCGGTGGCTGCCTTCCCTCCACAGAAGCAGCAGCAGCAGCAGCAACCACAGCAGCA
GCAGCAGCAGCAGCAGGCAGCCCTACCCCAGATGCCGCTCTTTGAGAACTTCTATTCCATGCCGCAGCAA
CCCTCGCAGCAACCCCAGGACTTTGGCCTGCAGCCAGCTGGGCCACTGGGACAGTCCCACCTGGCTCACC
ACAGCATGGCACCCTACCCCTTCCCCCCCAACCCAGATATGAACCCAGAACTGCGCAAGGCCCTTCTGCA
GGACTCAGCCCCGCAGCCAGCGCTACCTCAGGTCCAGATCCCCTTCCCCCGCCGCTCCCGCCGCCTCTCT
AAGGAGGGTATCCTGCCTCCCAGCGCCCTGGATGGGGCTGGCACCCAGCCTGGGCAGGAGGCCACTGGCA
ACCTGTTCCTACATCACTGGCCCCTGCAGCAGCCGCCACCTGGCTCCCTGGGGCAGCCCCATCCTGAAGC
TCTGGGATTCCCGCTGGAGCTGAGGGAGTCGCAGCTACTGCCTGATGGGGAGAGACTAGCACCCAATGGC
CGGGAGCGAGAGGCTCCTGCCATGGGCAGCGAGGAGGGCATGAGGGCAGTGAGCACAGGGGACTGTGGGC
AGGTGCTACGGGGCGGAGTGATCCAGAGCACGCGACGGAGGCGCCGGGCATCCCAGGAGGCCAATTTGCT
GACCCTGGCCCAGAAGGCTGTGGAGCTGGCCTCACTGCAGAATGCAAAGGATGGCAGTGGTTCTGAAGAG
AAGCGGAAAAGTGTATTGGCCTCAACTACCAAGTGTGGGGTGGAGTTTTCTGAGCCTTCCTTAGCCACCA
AGCGAGCACGAGAAGACAGTGGGATGGTACCCCTCATCATCCCAGTGTCTGTGCCTGTGCGAACTGTGGA
CCCAACTGAGGCAGCCCAGGCTGGAGGTCTTGATGAGGACGGGAAGGGTCCTGAACAGAACCCTGCTGAG
CACAAGCCATCAGTCATCGTCACCCGCAGGCGGTCCACCCGAATCCCCGGGACAGATGCTCAAGCTCAGG
CAGAGGACATGAATGTCAAGTTGGAGGGGGAGCCTTCCGTGCGGAAACCAAAGCAGCGGCCCAGGCCCGA
GCCCCTCATCATCCCCACCAAGGCGGGCACTTTCATCGCCCCTCCCGTCTACTCCAACATCACCCCATAC
CAGAGCCACCTGCGCTCTCCCGTGCGCCTAGCTGACCACCCCTCTGAGCGGAGCTTTGAGCTACCTCCCT
ACACGCCGCCCCCCATCCTCAGCCCTGTGCGGGAAGGCTCTGGCCTCTACTTCAATGCCATCATATCAAC
CAGCACCATCCCTGCCCCTCCTCCCATCACGCCTAAGAGTGCCCATCGCACGCTGCTCCGGACTAACAGT
GCTGAAGTAACCCCGCCTGTCCTCTCTGTGATGGGGGAGGCCACCCCAGTGAGCATCGAGCCACGGATCA
ACGTGGGCTCCCGGTTCCAGGCAGAAATCCCCTTGATGAGGGACCGTGCCCTGGCAGCTGCAGATCCCCA
CAAGGCTGACTTGGTGTGGCAGCCATGGGAGGACCTAGAGAGCAGCCGGGAGAAGCAGAGGCAAGTGGAA
GACCTGCTGACAGCCGCCTGCTCCAGCATTTTCCCTGGTGCTGGCACCAACCAGGAGCTGGCCCTGCACT
GTCTGCACGAATCCAGAGGAGACATCCTGGAAACGCTGAATAAGCTGCTGCTGAAGAAGCCCCTGCGGCC
CCACAACCATCCGCTGGCAACTTATCACTACACAGGCTCTGACCAGTGGAAGATGGCCGAGAGGAAGCTG
TTCAACAAAGGCATTGCCATCTACAAGAAGGATTTCTTCCTGGTGCAGAAGCTGATCCAGACCAAGACCG
TGGCCCAGTGCGTGGAGTTCTACTACACCTACAAGAAGCAGGTGAAAATCGGCCGCAATGGGACTCTAAC
CTTTGGGGATGTGGATACGAGCGATGAGAAGTCGGCCCAGGAAGAGGTTGAAGTGGATATTAAGACTTCC
CAAAAGTTCCCAAGGGTGCCTCTTCCCAGAAGAGAGTCCCCAAGTGAAGAGAGGCTGGAGCCCAAGAGGG
AGGTGAAGGAGCCCAGGAAGGAGGGGGAGGAGGAGGTGCCAGAGATCCAAGAGAAGGAGGAGCAGGAAGA
GGGGCGAGAGCGCAGCAGGCGGGCAGCGGCAGTCAAAGCCACGCAGACACTACAGGCCAATGAGTCGGCC
AGTGACATCCTCATCCTCCGGAGCCACGAGTCCAACGCCCCTGGGTCTGCCGGTGGCCAGGCCTCGGAGA
AGCCAAGGGAAGGGACAGGGAAGTCACGAAGGGCACTACCTTTTTCAGAGAAGAAGAAAAAAACAGAGAC
ATTCAGTAAGACCCAGAATCAGGAGAACACTTTCCCCTGTAAAAAATGTGGCAGGTAA

Translation (1045 aa):
MNLQAQPKAQNKRKRCLFGGQEPAPKEQPPPLQPPQQSIRVKEEQYLGHEGPGGAVSTSQPVELPPPSSL
ALLNSVVYGPERTSAAMLSQQVASVKWPNSVMAPGRGPERGGGGGVSDSSWQQQPGQPPPHSTWNCHSLS
LYSATKGSPHPGVGVPTYYNHPEALKREKAGGPQLDRYVRPMMPQKVQLEVGRPQAPLNSFHAAKKPPNQ
SLPLQPFQLAFGHQVNRQVFRQGPPPPNPVAAFPPQKQQQQQQPQQQQQQQQAALPQMPLFENFYSMPQQ
PSQQPQDFGLQPAGPLGQSHLAHHSMAPYPFPPNPDMNPELRKALLQDSAPQPALPQVQIPFPRRSRRLS
KEGILPPSALDGAGTQPGQEATGNLFLHHWPLQQPPPGSLGQPHPEALGFPLELRESQLLPDGERLAPNG
REREAPAMGSEEGMRAVSTGDCGQVLRGGVIQSTRRRRRASQEANLLTLAQKAVELASLQNAKDGSGSEE
KRKSVLASTTKCGVEFSEPSLATKRAREDSGMVPLIIPVSVPVRTVDPTEAAQAGGLDEDGKGPEQNPAE
HKPSVIVTRRRSTRIPGTDAQAQAEDMNVKLEGEPSVRKPKQRPRPEPLIIPTKAGTFIAPPVYSNITPY
QSHLRSPVRLADHPSERSFELPPYTPPPILSPVREGSGLYFNAIISTSTIPAPPPITPKSAHRTLLRTNS
AEVTPPVLSVMGEATPVSIEPRINVGSRFQAEIPLMRDRALAAADPHKADLVWQPWEDLESSREKQRQVE
DLLTAACSSIFPGAGTNQELALHCLHESRGDILETLNKLLLKKPLRPHNHPLATYHYTGSDQWKMAERKL
FNKGIAIYKKDFFLVQKLIQTKTVAQCVEFYYTYKKQVKIGRNGTLTFGDVDTSDEKSAQEEVEVDIKTS
QKFPRVPLPRRESPSEERLEPKREVKEPRKEGEEEVPEIQEKEEQEEGRERSRRAAAVKATQTLQANESA
SDILILRSHESNAPGSAGGQASEKPREGTGKSRRALPFSEKKKKTETFSKTQNQENTFPCKKCGR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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