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Report for CCDS9739.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9739.1 Public Homo sapiens 14 L3HYPDH 24 110 108 CCDS HistoryNCBI Gene:112849Re-query CCDS DB by CCDS ID:9739.1Re-query CCDS DB by GeneID:112849See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9739.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000247194.9 ENSP00000247194.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000247194.9Link to Ensembl Protein Viewer:ENSP00000247194.4Re-query CCDS DB by Nucleotide ID:ENST00000247194Re-query CCDS DB by Protein ID:ENSP00000247194
Original member Current member NCBI NM_144581.2 NP_653182.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144581.2Link to Protein Sequence:NP_653182.1Re-query CCDS DB by Nucleotide ID:NM_144581Re-query CCDS DB by Protein ID:NP_653182Link to BLAST:NP_653182.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653182.1 354 Q96EM0 354 100% 0 0

Chromosomal Locations for CCDS 9739.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 59472965 59473090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 59475869 59476006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 59476092 59476214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 59479182 59479351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 59483809 59484316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1065 nt):
ATGGAGAGCGCGCTGGCGGTGCCCCGGCTGCCCCCGCATGATCCAGGGACGCCGGTGCTGTCGGTGGTGG
ACATGCACACGGGCGGCGAGCCCTTGCGTATCGTGCTGGCGGGGTGTCCGGAGGTGTCTGGGCCCACCCT
GCTGGCCAAGCGGCGCTACATGCGCCAGCACCTTGACCACGTGCGGCGACGGCTCATGTTCGAGCCCCGA
GGGCACCGGGACATGTACGGGGCGGTCCTAGTCCCGAGCGAGCTGCCGGACGCGCATCTGGGCGTCCTGT
TCCTGCACAACGAGGGCTACAGCTCCATGTGCGGCCACGCAGTGCTGGCGCTGGGCCGCTTCGCTTTGGA
CTTCGGGCTTGTGCCGGCGCCCCCTGCGGGCACCCGCGAGGCCCGCGTCAATATCCACTGCCCCTGCGGG
CTGGTGACCGCCTTCGTGGCATGCGAGGACGGCCGCAGCCACGGACCGGTGCGCTTCCACAGCGTCCCGG
CCTTCGTGCTGGCCACAGATCTCATGGTGGATGTTCCTGGACATGGAAAGGTGATGGTGGACATTGCATA
TGGCGGTGCATTTTATGCATTTGTTACTGCTGAAAAGTTAGGACTAGACATTTGTTCTGCAAAGACCAGG
GACCTTGTGGATGCAGCGAGTGCAGTGACAGAGGCAGTGAAAGCTCAGTTTAAAATTAATCATCCTGATA
GTGAAGACCTTGCCTTTTTATATGGAACTATATTAACAGATGGAAAAGATGCTTATACCAAGGAACCAAC
CACCAACATTTGTGTTTTTGCAGATGAACAGGTTGACAGAAGTCCCACTGGCTCAGGAGTGACAGCCCGA
ATTGCCTTACAGTATCACAAAGGGCTTCTGGAACTGAACCAGATGAGAGCCTTCAAAAGCAGTGCAACTG
GCTCAGTATTCACAGGGAAAGCTGTGAGGGAAGCGAAATGTGGTGATTTTAAAGCTGTTATAGTGGAAGT
ATCAGGACAAGCCCATTACACGGGTACAGCAAGCTTTATAATAGAAGATGACGACCCATTGAGGGATGGA
TTTCTTCTCAAGTGA

Translation (354 aa):
MESALAVPRLPPHDPGTPVLSVVDMHTGGEPLRIVLAGCPEVSGPTLLAKRRYMRQHLDHVRRRLMFEPR
GHRDMYGAVLVPSELPDAHLGVLFLHNEGYSSMCGHAVLALGRFALDFGLVPAPPAGTREARVNIHCPCG
LVTAFVACEDGRSHGPVRFHSVPAFVLATDLMVDVPGHGKVMVDIAYGGAFYAFVTAEKLGLDICSAKTR
DLVDAASAVTEAVKAQFKINHPDSEDLAFLYGTILTDGKDAYTKEPTTNICVFADEQVDRSPTGSGVTAR
IALQYHKGLLELNQMRAFKSSATGSVFTGKAVREAKCGDFKAVIVEVSGQAHYTGTASFIIEDDDPLRDG
FLLK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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