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Report for CCDS9723.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9723.1 Public Homo sapiens 14 DLGAP5 24 110 108 CCDS HistoryNCBI Gene:9787Re-query CCDS DB by CCDS ID:9723.1Re-query CCDS DB by GeneID:9787See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9723.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000247191.7 ENSP00000247191.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000247191.7Link to Ensembl Protein Viewer:ENSP00000247191.2Re-query CCDS DB by Nucleotide ID:ENST00000247191Re-query CCDS DB by Protein ID:ENSP00000247191
Original member Current member NCBI NM_014750.5 NP_055565.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014750.5Link to Protein Sequence:NP_055565.3Re-query CCDS DB by Nucleotide ID:NM_014750Re-query CCDS DB by Protein ID:NP_055565Link to BLAST:NP_055565.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055565.3 846 Q15398-2 846 100% 0 0

Chromosomal Locations for CCDS 9723.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 55148351 55148473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55150799 55150848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55151695 55151941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55152590 55152647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55154617 55154806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55158522 55158741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55162971 55163075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55169399 55169559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55170702 55170787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55175346 55175472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55175894 55176018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55177062 55177336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55179629 55179699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55180656 55180778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55181213 55181297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55182370 55182432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55183560 55183753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55188942 55189179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2541 nt):
ATGTCTTCATCACATTTTGCCAGTCGACACAGGAAGGATATAAGTACTGAAATGATTAGAACTAAAATTG
CTCATAGGAAATCACTGTCTCAGAAAGAAAATAGACATAAGGAATACGAACGAAATAGACACTTTGGTTT
GAAAGATGTAAACATTCCAACCTTGGAAGGTAGAATTCTTGTTGAATTAGATGAGACATCTCAAGGGCTT
GTTCCAGAAAAGACCAATGTTAAGCCAAGGGCAATGAAAACTATTCTAGGTGATCAACGAAAACAGATGC
TCCAAAAATACAAAGAAGAAAAGCAACTTCAAAAATTGAAAGAGCAGAGAGAGAAAGCTAAACGAGGAAT
ATTTAAAGTGGGTCGTTATAGACCTGATATGCCTTGTTTTCTTTTATCAAACCAGAATGCTGTGAAAGCT
GAGCCAAAAAAGGCTATTCCATCTTCTGTACGGATTACAAGGTCAAAGGCCAAAGACCAAATGGAGCAGA
CTAAGATTGATAACGAGAGTGATGTTCGAGCAATCCGACCTGGTCCAAGACAAACTTCTGAAAAGAAAGT
GTCAGACAAAGAGAAAAAAGTTGTGCAGCCTGTAATGCCCACGTCGTTGAGAATGACTCGATCAGCTACT
CAAGCAGCAAAGCAGGTTCCCAGAACAGTCTCATCTACCACAGCAAGAAAGCCAGTCACAAGAGCTGCTA
ATGAAAACGAACCAGAAGGAAAGGTGCCAAGTAAAGGAAGACCTGCCAAAAATGTAGAAACAAAACCCGA
CAAGGGTATTTCTTGTAAAGTCGATAGTGAAGAAAATACTTTGAATTCACAAACTAATGCAACAAGTGGA
ATGAATCCAGATGGAGTCTTATCAAAAATGGAAAACTTACCTGAGATAAATACTGCAAAAATAAAAGGGA
AGAATTCCTTTGCACCTAAGGATTTTATGTTTCAGCCACTGGATGGTCTGAAGACCTATCAAGTAACACC
TATGACTCCCAGAAGTGCCAATGCTTTTTTGACACCCAGTTACACCTGGACTCCTTTAAAAACAGAAGTT
GATGAGTCTCAAGCAACAAAAGAAATTTTGGCACAAAAATGTAAAACTTACTCTACCAAGACAATACAGC
AAGATTCAAATAAATTGCCATGTCCTTTGGGTCCTCTAACTGTTTGGCATGAAGAACATGTTTTAAATAA
AAATGAAGCTACTACTAAAAATTTAAATGGCCTTCCAATAAAAGAAGTCCCATCACTTGAAAGAAATGAA
GGTCGAATTGCTCAGCCCCACCATGGTGTGCCATATTTCAGAAATATCCTCCAGTCAGAAACTGAGAAAT
TAACTTCACATTGCTTCGAGTGGGACAGGAAACTTGAATTGGACATTCCAGATGATGCTAAAGATCTTAT
TCGCACAGCAGTTGGTCAAACAAGACTCCTTATGAAGGAAAGGTTTAAACAGTTTGAAGGACTGGTTGAT
GATTGTGAATATAAACGAGGTATAAAGGAGACTACCTGTACAGATCTGGATGGATTTTGGGATATGGTTA
GTTTTCAGATAGAAGATGTAATCCACAAATTCAACAATCTGATCAAACTTGAGGAATCTGGGTGGCAAGT
CAATAATAATATGAATCATAATATGAACAAAAATGTCTTTAGGAAAAAAGTTGTCTCAGGTATAGCAAGT
AAACCAAAACAGGATGATGCTGGAAGAATTGCAGCGAGAAATCGCCTAGCTGCCATAAAAAATGCAATGA
GAGAGAGAATTAGGCAGGAAGAATGTGCTGAAACAGCAGTTTCTGTGATACCAAAGGAAGTTGATAAAAT
AGTGTTCGATGCTGGATTTTTCAGAGTTGAAAGTCCTGTTAAATTATTCTCAGGACTTTCTGTCTCTTCT
GAAGGCCCTTCTCAAAGACTTGGAACACCTAAGTCTGTCAACAAAGCTGTATCTCAGAGTAGAAATGAGA
TGGGCATTCCACAACAAACTACATCACCAGAAAATGCCGGTCCTCAGAATACGAAAAGTGAACATGTGAA
GAAGACTTTGTTTTTGAGTATTCCTGAAAGCAGGAGCAGCATAGAAGATGCTCAGTGTCCTGGATTACCA
GATTTAATTGAAGAAAATCATGTTGTAAATAAGACAGACTTGAAGGTGGATTGTTTATCCAGTGAGAGAA
TGAGTTTGCCTCTTCTTGCTGGTGGAGTAGCAGATGATATTAATACTAACAAAAAAGAAGGAATTTCAGA
TGTTGTGGAAGGAATGGAACTGAATTCTTCAATTACATCACAGGATGTTTTGATGAGTAGCCCTGAAAAA
AATACAGCTTCACAAAATAGCATCTTAGAAGAAGGGGAAACTAAAATTTCTCAGTCAGAACTATTTGATA
ATAAAAGTCTCACTACTGAATGCCACCTTCTTGATTCACCAGGTCTAAACTGCAGTAATCCATTTACTCA
GCTGGAGAGGAGACATCAAGAACATGCCAGACACATTTCTTTTGGTGGTAACCTGATTACTTTTTCACCT
CTACAACCAGGAGAATTTTGA

Translation (846 aa):
MSSSHFASRHRKDISTEMIRTKIAHRKSLSQKENRHKEYERNRHFGLKDVNIPTLEGRILVELDETSQGL
VPEKTNVKPRAMKTILGDQRKQMLQKYKEEKQLQKLKEQREKAKRGIFKVGRYRPDMPCFLLSNQNAVKA
EPKKAIPSSVRITRSKAKDQMEQTKIDNESDVRAIRPGPRQTSEKKVSDKEKKVVQPVMPTSLRMTRSAT
QAAKQVPRTVSSTTARKPVTRAANENEPEGKVPSKGRPAKNVETKPDKGISCKVDSEENTLNSQTNATSG
MNPDGVLSKMENLPEINTAKIKGKNSFAPKDFMFQPLDGLKTYQVTPMTPRSANAFLTPSYTWTPLKTEV
DESQATKEILAQKCKTYSTKTIQQDSNKLPCPLGPLTVWHEEHVLNKNEATTKNLNGLPIKEVPSLERNE
GRIAQPHHGVPYFRNILQSETEKLTSHCFEWDRKLELDIPDDAKDLIRTAVGQTRLLMKERFKQFEGLVD
DCEYKRGIKETTCTDLDGFWDMVSFQIEDVIHKFNNLIKLEESGWQVNNNMNHNMNKNVFRKKVVSGIAS
KPKQDDAGRIAARNRLAAIKNAMRERIRQEECAETAVSVIPKEVDKIVFDAGFFRVESPVKLFSGLSVSS
EGPSQRLGTPKSVNKAVSQSRNEMGIPQQTTSPENAGPQNTKSEHVKKTLFLSIPESRSSIEDAQCPGLP
DLIEENHVVNKTDLKVDCLSSERMSLPLLAGGVADDINTNKKEGISDVVEGMELNSSITSQDVLMSSPEK
NTASQNSILEEGETKISQSELFDNKSLTTECHLLDSPGLNCSNPFTQLERRHQEHARHISFGGNLITFSP
LQPGEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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