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Report for CCDS9658.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9658.1 Public Homo sapiens 14 MBIP 24 110 108 CCDS HistoryNCBI Gene:51562Re-query CCDS DB by CCDS ID:9658.1Re-query CCDS DB by GeneID:51562See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9658.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000416007.9 ENSP00000399718.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000416007.9Link to Ensembl Protein Viewer:ENSP00000399718.2Re-query CCDS DB by Nucleotide ID:ENST00000416007Re-query CCDS DB by Protein ID:ENSP00000399718
Original member Current member NCBI NM_016586.3 NP_057670.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016586.3Link to Protein Sequence:NP_057670.2Re-query CCDS DB by Nucleotide ID:NM_016586Re-query CCDS DB by Protein ID:NP_057670Link to BLAST:NP_057670.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057670.2 344 Q9NS73-1 344 100% 0 0

Chromosomal Locations for CCDS 9658.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 36299083 36299190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 36300785 36300823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 36308092 36308189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 36311573 36311725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 36311959 36312024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 36314512 36314608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 36314691 36314915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 36316693 36316812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 36320460 36320588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1035 nt):
ATGGCTGCTGCCACGGAGCTTAATCGCCCGAGCAGCGGTGACAGGAACCTGGAGCGAAGATGCAGACCCA
ACCTCTCCCGAGAGGTGCTCTACGAAATCTTTCGCTCCCTACACACCCTGGTTGGACAGCTTGACCTCAG
AGATGATGTGGTGAAAATTACAATCGATTGGAACAAGCTCCAGAGCCTCTCGGCATTCCAGCCTGCATTG
CTCTTTAGTGCACTTGAACAACACATTTTATATTTACAGCCTTTTTTAGCAAAACTTCAGTCTCCGATTA
AAGAGGAGAATACAACTGCTGTTGAAGAGATAGGAAGAACAGAAATGGGGAACAAAAATGAAGTAAATGA
CAAATTTTCCATTGGCGACCTACAAGAGGAAGAAAAGCACAAAGAAAGTGATTTAAGAGATGTGAAAAAG
ACACAGATCCATTTTGATCCAGAAGTAGTTCAGATAAAGGCTGGAAAAGCAGAAATTGACAGACGAATAT
CTGCATTTATTGAAAGAAAGCAAGCTGAAATCAATGAAAACAACGTCAGGGAATTTTGCAATGTTATTGA
TTGTAATCAAGAAAATAGTTGTGCAAGAACTGATGCGATTTTTACCCCTTACCCCGGATTTAAAAGTCAC
GTAAAAGTTTCTAGAGTTGTGAATACATACGGACCACAGACTAGACCTGAAGGAATTCCAGGGTCAGGTC
ATAAACCTAACAGCATGCTTCGAGACTGTGGTAATCAGGCTGTAGAAGAACGACTACAAAATATTGAGGC
CCACTTGCGGTTACAGACAGGTGGTCCAGTGCCAAGAGACATTTATCAGAGAATTAAAAAACTTGAGGAT
AAAATCCTTGAATTGGAAGGCATCTCTCCTGAATATTTTCAGTCTGTAAGCTTTTCTGGAAAAAGAAGAA
AAGTTCAACCACCTCAACAGAACTATTCACTGGCTGAACTTGATGAGAAAATTAGTGCCCTCAAACAAGC
CCTCCTCAGAAAATCAAGAGAAGCAGAATCCATGGCAACCCACCACCTTCCATGA

Translation (344 aa):
MAAATELNRPSSGDRNLERRCRPNLSREVLYEIFRSLHTLVGQLDLRDDVVKITIDWNKLQSLSAFQPAL
LFSALEQHILYLQPFLAKLQSPIKEENTTAVEEIGRTEMGNKNEVNDKFSIGDLQEEEKHKESDLRDVKK
TQIHFDPEVVQIKAGKAEIDRRISAFIERKQAEINENNVREFCNVIDCNQENSCARTDAIFTPYPGFKSH
VKVSRVVNTYGPQTRPEGIPGSGHKPNSMLRDCGNQAVEERLQNIEAHLRLQTGGPVPRDIYQRIKKLED
KILELEGISPEYFQSVSFSGKRRKVQPPQQNYSLAELDEKISALKQALLRKSREAESMATHHLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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