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Report for CCDS9638.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9638.1 Public Homo sapiens 14 G2E3 24 110 108 CCDS HistoryNCBI Gene:55632Re-query CCDS DB by CCDS ID:9638.1Re-query CCDS DB by GeneID:55632See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9638.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000206595.11 ENSP00000206595.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000206595.11Link to Ensembl Protein Viewer:ENSP00000206595.6Re-query CCDS DB by Nucleotide ID:ENST00000206595Re-query CCDS DB by Protein ID:ENSP00000206595
Original member Current member NCBI NM_017769.5 NP_060239.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017769.5Link to Protein Sequence:NP_060239.2Re-query CCDS DB by Nucleotide ID:NM_017769Re-query CCDS DB by Protein ID:NP_060239Link to BLAST:NP_060239.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060239.2 706 Q7L622 706 100% 0 0

Chromosomal Locations for CCDS 9638.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 30581080 30581116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30586718 30586815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30589383 30589484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30592323 30592447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30593474 30593639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30597420 30597526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30598483 30598599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30601770 30601894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30601999 30602131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30605505 30605812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30607888 30608069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30612207 30612379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30615349 30615539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30616278 30616534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2121 nt):
ATGAATGAAAGTAAACCTGGTGACTCACAGAACCTTGCTTGTGTTTTCTGTCGAAAACATGATGACTGTC
CTAATAAATACGGAGAAAAGAAAACTAAGGAGAAATGGAATCTCACTGTACATTACTACTGTTTGTTGAT
GTCAAGTGGAATTTGGCAGAGAGGCAAAGAAGAAGAAGGAGTTTATGGTTTTCTAATAGAAGATATCAGG
AAGGAAGTGAATAGAGCTTCTAAACTGAAATGCTGTGTTTGCAAGAAAAATGGTGCTTCAATTGGATGTG
TTGCACCCCGATGTAAACGAAGTTATCATTTCCCATGTGGACTTCAGAGAGAATGTATTTTCCAGTTTAC
TGGCAATTTTGCGTCATTTTGTTGGGACCATCGACCTGTTCAAATAATTACATCTAATAATTATAGAGAG
TCCTTACCATGCACCATTTGCTTGGAATTTATTGAGCCTATTCCAAGTTATAACATATTACGAAGTCCTT
GTTGTAAGAACGCTTGGTTTCATAGAGACTGTTTACAGGTTCAAGCAATAAATGCGGGAGTGTTTTTCTT
TAGGTGTACAATATGCAATAATAGTGACATCTTTCAGAAAGAGATGTTGAGAATGGGAATTCATATTCCT
GAAAAAGATGCTTCCTGGGAATTAGAGGAAAACGCTTATCAAGAGCTTCTGCAGCACTATGAGCGTTGTG
ATGTTCGAAGATGTCGTTGCAAAGAAGGGCGAGACTATAATGCACCTGATAGCAAATGGGAAATAAAGCG
CTGTCAGTGTTGTGGTTCCAGTGGCACACATTTAGCCTGCTCCTCATTACGGTCATGGGAGCAAAATTGG
GAGTGTTTGGAATGTAGGGGTATTATCTACAATTCAGGAGAGTTCCAAAAAGCCAAAAAACATGTATTAC
CCAATTCTAATAATGTGGGGATTACAGATTGTTTGTTGGAAGAGTCATCACCTAAATTACCCAGACAGTC
ACCTGGATCCCAGAGTAAAGATCTACTGAGGCAAGGCAGCAAATTTAGAAGAAATGTATCAACACTATTA
ATAGAGTTAGGATTCCAAATTAAAAAAAAAACTAAAAGATTGTATATCAACAAAGCCAATATCTGGAATA
GTGCCTTAGATGCATTCAGAAATCGAAACTTTAATCCTTCATATGCAATTGAAGTAGCATATGTTATTGA
AAATGATAATTTTGGAAGTGAGCATCCTGGATCAAAGCAAGAATTTCTGAGTCTCTTAATGCAACATCTT
GAGAACTCATCATTGTTTGAAGGGTCCTTGTCAAAGAACTTGTCTCTAAATTCTCAAGCTCTGAAAGAGA
ATCTTTACTATGAAGCTGGCAAAATGCTTGCCATTTCTTTAGTTCACGGTGGTCCTTCACCTGGTTTCTT
TTCTAAAACCTTGTTTAACTGCCTTGTTTATGGACCAGAAAATACCCAGCCAATTTTAGATGATGTTTCA
GACTTTGATGTGGCACAGATTATAATCAGGATAAATACTGCAACAACTGTAGCTGACTTAAAGTCAATAA
TAAATGAATGCTATAACTACCTTGAGTTAATTGGATGTCTCAGACTTATAACGACATTAAGTGATAAATA
TATGTTAGTAAAAGACATACTTGGCTACCATGTAATTCAGAGAGTCCACACACCCTTTGAAAGTTTTAAG
CAGGGTCTGAAAACCCTTGGTGTTTTGGAGAAAATTCAGGCTTATCCAGAAGCATTTTGTAGCATCCTGT
GTCATAAACCTGAGAGTCTTTCTGCAAAAATCCTTAGTGAGCTTTTTACAGTACACACATTACCTGATGT
GAAAGCTTTGGGGTTTTGGAACAGTTACTTACAGGCTGTTGAAGATGGTAAATCTACAACAACAATGGAA
GACATTCTTATTTTTGCAACTGGTTGCAGTTCCATTCCTCCAGCTGGATTTAAACCCACTCCTTCAATTG
AGTGTCTGCATGTGGATTTTCCTGTTGGAAACAAGTGTAATAACTGTTTAGCAATTCCCATCACCAATAC
ATATAAAGAGTTTCAAGAAAATATGGACTTCACCATAAGAAACACTCTAAGACTAGAAAAGGAAGAAAGT
TCTCATTACATTGGACATTAA

Translation (706 aa):
MNESKPGDSQNLACVFCRKHDDCPNKYGEKKTKEKWNLTVHYYCLLMSSGIWQRGKEEEGVYGFLIEDIR
KEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQRECIFQFTGNFASFCWDHRPVQIITSNNYRE
SLPCTICLEFIEPIPSYNILRSPCCKNAWFHRDCLQVQAINAGVFFFRCTICNNSDIFQKEMLRMGIHIP
EKDASWELEENAYQELLQHYERCDVRRCRCKEGRDYNAPDSKWEIKRCQCCGSSGTHLACSSLRSWEQNW
ECLECRGIIYNSGEFQKAKKHVLPNSNNVGITDCLLEESSPKLPRQSPGSQSKDLLRQGSKFRRNVSTLL
IELGFQIKKKTKRLYINKANIWNSALDAFRNRNFNPSYAIEVAYVIENDNFGSEHPGSKQEFLSLLMQHL
ENSSLFEGSLSKNLSLNSQALKENLYYEAGKMLAISLVHGGPSPGFFSKTLFNCLVYGPENTQPILDDVS
DFDVAQIIIRINTATTVADLKSIINECYNYLELIGCLRLITTLSDKYMLVKDILGYHVIQRVHTPFESFK
QGLKTLGVLEKIQAYPEAFCSILCHKPESLSAKILSELFTVHTLPDVKALGFWNSYLQAVEDGKSTTTME
DILIFATGCSSIPPAGFKPTPSIECLHVDFPVGNKCNNCLAIPITNTYKEFQENMDFTIRNTLRLEKEES
SHYIGH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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