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Report for CCDS94663.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94663.1 Public Homo sapiens X BCORL1 24 110 108 CCDS HistoryNCBI Gene:63035Re-query CCDS DB by CCDS ID:94663.1Re-query CCDS DB by GeneID:63035See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94663.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000540052.6 ENSP00000437775.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000540052.6Link to Ensembl Protein Viewer:ENSP00000437775.2Re-query CCDS DB by Nucleotide ID:ENST00000540052Re-query CCDS DB by Protein ID:ENSP00000437775
Original member Current member NCBI NM_001184772.3 NP_001171701.1 Accepted alive Link to Nucleotide Sequence:NM_001184772.3Link to Protein Sequence:NP_001171701.1Re-query CCDS DB by Nucleotide ID:NM_001184772Re-query CCDS DB by Protein ID:NP_001171701Link to BLAST:NP_001171701.1
Original member Current member NCBI NM_001379450.1 NP_001366379.1 Accepted alive Link to Nucleotide Sequence:NM_001379450.1Link to Protein Sequence:NP_001366379.1Re-query CCDS DB by Nucleotide ID:NM_001379450Re-query CCDS DB by Protein ID:NP_001366379Link to BLAST:NP_001366379.1
Original member Current member NCBI NM_001379451.1 NP_001366380.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001379451.1Link to Protein Sequence:NP_001366380.1Re-query CCDS DB by Nucleotide ID:NM_001379451Re-query CCDS DB by Protein ID:NP_001366380Link to BLAST:NP_001366380.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171701.1 1785 Q5H9F3-3 1785 100% 0 0
NP_001366379.1 1785 Q5H9F3-3 1785 100% 0 0
NP_001366380.1 1785 Q5H9F3-3 1785 100% 0 0

Chromosomal Locations for CCDS 94663.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 130005232 130005317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 130012578 130012668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 130012950 130016213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 130020985 130021150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 130022897 130022977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 130024990 130025379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 130028635 130028861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 130034455 130034676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 130037367 130037533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 130039137 130039282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 130050717 130050794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 130051860 130052016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 130055854 130056136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5358 nt):
ATGATCTCTACAGCACCGCTCTACAGCGGCGTGCACAACTGGACCAGTTCTGACCGGATTCGCATGTGTG
GCATCAACGAGGAGAGAAGAGCACCTCTTTCTGATGAGGAGTCAACGACAGGCGACTGCCAGCACTTTGG
ATCTCAGGAGTTTTGTGTCAGCAGCAGTTTTTCCAAGGTGGAGCTCACGGCAGTTGGAAGTGGCAGCAAT
GCCCGGGGGGCAGACCCAGATGGCAGTGCTACAGAAAAACTTGGGCACAAGTCAGAAGACAAGCCTGACG
ATCCCCAGCCAAAAATGGACTACGCTGGGAACGTGGCAGAGGCTGAGGGCCTCTTGGTGCCCCTGAGCAG
CCCAGGAGACGGGCTCAAGCTTCCCGCATCTGACAGCGCCGAGGCCAGCAACAGCAGGGCCGACTGCTCC
TGGACTCCACTCAACACCCAAATGAGCAAACAGGTTGACTGCTCACCCGCCGGAGTAAAGGCTTTGGACT
CTCGGCAAGGTGTTGGAGAGAAGAATACTTTCATTTTGGCAACTCTGGGAACTGGAGTCCCTGTGGAGGG
GACCCTGCCCCTGGTTACCACTAACTTCAGTCCTCTGCCAGCCCCTATCTGTCCCCCTGCTCCCGGTTCG
GCCTCTGTGCCCCACTCTGTTCCAGATGCATTCCAGGTTCCCCTCTCCGTCCCTGCCCCAGTCCCCCATT
CAGGGCTTGTTCCAGTCCAAGTTGCCACTTCGGTTCCAGCTCCTTCCCCTCCCTTAGCACCTGTCCCGGC
TCTGGCTCCAGCGCCACCGTCAGTGCCCACGCTCATCTCTGACTCGAACCCCCTTTCTGTTTCGGCCTCA
GTCTTGGTGCCTGTGCCAGCTTCTGCTCCCCCTTCAGGCCCGGTTCCCTTGTCGGCTCCAGCTCCTGCCC
CGCTTTCAGTCCCAGTTTCAGCTCCTCCCTTGGCTCTCATCCAGGCTCCTGTGCCCCCTTCAGCTCCGAC
CTTGGTTCTCGCTCCCGTCCCCACTCCGGTTCTGGCTCCCATGCCAGCATCCACGCCTCCAGCGGCCCCT
GCCCCTCCGTCTGTGCCCATGCCCACTCCAACCCCATCTTCCGGCCCACCTTCTACCCCCACCCTCATCC
CCGCCTTTGCTCCTACACCGGTGCCTGCACCCACCCCAGCCCCCATCTTTACTCCAGCCCCTACACCCAT
GCCTGCTGCCACGCCAGCTGCCATTCCCACCTCTGCACCCATCCCGGCCTCCTTCAGTTTGAGTAGAGTG
TGCTTTCCTGCAGCTCAGGCACCAGCTATGCAAAAAGTCCCCCTGTCCTTTCAGCCAGGGACAGTGCTGA
CCCCGAGCCAGCCGCTGGTATATATCCCGCCTCCAAGCTGTGGGCAGCCACTCAGTGTGGCCACACTGCC
AACCACTCTAGGGGTTTCCTCCACTCTTACGCTCCCTGTCCTGCCGTCCTACCTGCAGGACAGGTGTCTC
CCAGGCGTGCTAGCCTCCCCCGAGCTCCGTTCTTACCCGTATGCATTTTCTGTGGCCCGGCCTCTGACTT
CGGATTCCAAGCTGGTATCTCTGGAGGTGAACAGGCTCCCCTGCACTTCCCCATCCGGTAGCACCACCAC
CCAGCCTGCACCCGATGGGGTCCCTGGGCCTTTGGCAGATACCTCCCTTGTTACTGCTTCTGCCAAGGTG
CTTCCAACTCCACAGCCTCTGCTGCCAGCCCCCAGTGGGAGCTCAGCCCCACCGCACCCCGCCAAGATGC
CCAGTGGCACCGAGCAGCAAACAGAAGGGACTTCCGTTACCTTCTCTCCTCTTAAGTCACCGCCACAGCT
GGAACGAGAGATGGCCTCTCCACCTGAGTGCAGCGAGATGCCCCTTGATCTGTCCTCCAAGTCCAACCGC
CAGAAGCTTCCATTGCCGAACCAGCGCAAGACACCCCCCATGCCTGTGTTGACCCCCGTGCACACCAGCA
GCAAGGCCCTCCTCTCCACAGTCCTGTCTAGGTCTCAGCGCACAACCCAGGCTGCCGGTGGCAATGTCAC
CTCCTGCCTGGGCTCCACTTCCTCGCCCTTTGTCATCTTTCCCGAGATCGTGAGGAATGGGGACCCGAGC
ACCTGGGTGAAGAACTCAACTGCACTGATCAGCACCATTCCTGGCACCTACGTGGGAGTGGCCAACCCAG
TGCCTGCATCCCTGCTGCTGAACAAAGACCCCAACCTGGGCCTCAACCGTGACCCCCGCCATCTCCCCAA
GCAGGAGCCCATCTCCATCATTGATCAAGGAGAGCCTAAGGGCACTGGTGCCACGTGTGGCAAAAAGGGC
AGCCAGGCTGGTGCTGAGGGACAGCCAAGCACAGTGAAACGATATACTCCAGCCCGCATTGCCCCTGGGC
TGCCAGGGTGCCAAACCAAGGAACTCTCTTTGTGGAAACCCACGGGGCCGGCAAATATTTATCCCCGGTG
TTCAGTCAATGGGAAACCTACCAGCACCCAGGTCCTGCCTGTTGGCTGGTCCCCGTACCACCAGGCGTCT
CTGCTTTCCATTGGCATTTCCAGTGCCGGGCAGCTGACCCCCAGTCAGGGGGCGCCCATCAGGCCCACCA
GCGTTGTTTCGGAGTTTTCTGGTGTGCCATCTCTCAGCTCCAGCGAAGCCGTGCACGGACTTCCTGAGGG
GCAACCACGGCCTGGGGGCTCCTTCGTTCCAGAGCAGGACCCTGTTACAAAGAACAAAACTTGCCGGATT
GCTGCCAAGCCTTATGAAGAACAAGTCAATCCTGTCCTCTTGACCCTCAGCCCTCAGACTGGGACCCTGG
CACTGTCTGTTCAGCCTAGCGGTGGGGACATTCGAATGAATCAGGGGCCTGAGGAATCAGAGAGCCACCT
CTGCTCTGACAGCACTCCTAAGATGGAAGGCCCCCAGGGGGCTTGTGGCCTGAAGCTGGCAGGAGACACG
AAGCCTAAGAACCAAGTGCTGGCCACCTACATGTCCCATGAGCTGGTCCTGGCCACCCCCCAGAACCTGC
CTAAGATGCCTGAGCTGCCTTTGCTACCTCACGACAGCCACCCCAAGGAACTTATATTGGACGTGGTTCC
GAGCAGCAGGAGGGGCTCCAGCACAGAGCGCCCACAGCTTGGAAGCCAGGTGGATCTGGGGCGAGTGAAA
ATGGAGAAGGTGGATGGTGATGTGGTCTTCAATTTAGCCACCTGCTTCCGGGCTGATGGCCTCCCAGTGG
CTCCCCAGAGGGGCCAAGCTGAAGTTCGGGCTAAGGCCGGGCAGGCTCGAGTGAAACAGGAAAGCGTAGG
GGTCTTTGCTTGCAAGAACAAGTGGCAGCCAGATGATGTGACGGAATCTCTGCCGCCCAAGAAGATGAAG
TGCGGCAAAGAGAAGGACAGTGAAGAGCAGCAGCTCCAGCCACAAGCCAAGGCCGTGGTCCGGAGTTCCC
ACAGACCCAAGTGCCGGAAGCTGCCCAGTGACCCCCAGGAATCCACCAAGAAAAGCCCCAGGGGGGCTTC
AGATTCAGGAAAAGAGCACAATGGAGTCAGGGGAAAGCACAAGCACCGGAAGCCGACAAAGCCGGAGTCC
CAGTCTCCAGGAAAACGAGCCGACAGCCACGAGGAAGGTTCCTTGGAAAAGAAAGCAAAGAGCAGTTTCC
GTGACTTTATTCCTGTGGTTCTGAGCACCCGCACGCGCAGTCAGTCTGGAAGCATCTGTAGCTCCTTTGC
TGGCATGGCAGACAGTGACATGGGAAGCCAGGAAGTCTTCCCCACAGAAGAAGAAGAGGAGGTAACCCCC
ACCCCAGCTAAGCGTCGAAAGGTGAGAAAGACCCAACGGGACACCCAGTATCGCAGCCACCATGCCCAGG
ACAAGTCTCTGCTGAGCCAGGGCCGAAGGCACCTGTGGCGAGCCCGAGAAATGCCCTGGAGGACAGAGGC
TGCCCGGCAAATGTGGGACACCAATGAGGAGGAGGAGGAAGAAGAGGAGGAGGGCCTGCTGAAGAGGAAG
AAACGAAGACGGCAGAAGAGCCGAAAATATCAGACTGGGGAGTACCTGACAGAGCAAGAAGACGAGCAGC
GGCGGAAAGGGAGAGCAGATTTAAAGGCCCGTAAGCAGAAGACTTCCTCCTCCCAAAGTTTGGAGCACCG
CCTCAGGAACAGGAACCTTCTCTTGCCCAACAAAGTCCAGGGGATCTCGGATTCACCAAACGGTTTCCTC
CCAAATAACCTGGAAGAGCCAGCCTGCCTTGAAAATTCAGAAAAGCCATCAGGAAAACGAAAGTGCAAGA
CCAAGCACATGGCAACCGTCTCAGAAGAGGCAAAGGGCAAAGGTCGTTGGAGCCAGCAGAAGACACGATC
TCCCAAATCTCCCACCCCAGTGAAACCCACAGAACCATGTACACCCTCTAAGTCCCGAAGTGCCAGCTCA
GAGGAGGCCTCAGAGTCACCTACAGCCCGGCAGATCCCCCCAGAGGCACGTCGGCTCATAGTGAACAAAA
ATGCTGGTGAGACCCTCCTGCAGAGGGCGGCGCGTCTTGGCTATAAGGATGTTGTTCTCTACTGCCTCCA
GAAAGACAGTGAAGATGTGAATCACCGTGACAATGCTGGCTACACAGCCCTGCATGAGGCTTGTTCCCGG
GGCTGGACCGACATCCTGAACATCCTGCTGGAGCACGGGGCCAACGTGAACTGCAGTGCGCAGGACGGCA
CGAGGCCAGTTCATGATGCGGTGGTCAATGACAACCTGGAGACCATCTGGCTCCTGCTGTCCTATGGGGC
CGATCCCACACTGGCTACCTACTCGGGTCAGACAGCCATGAAGCTGGCCAGCAGCGACACCATGAAGCGC
TTTCTCAGTGATCACCTCTCGGATCTTCAGGGCCGGGCAGAGGGTGATCCCGGTGTATCCTGGGATTTTT
ACAGCAGTTCTGTGTTGGAGGAAAAAGACGGGTTTGCCTGTGACCTCCTACATAATCCTCCTGGGAGCTC
AGATCAAGAAGGAGACGATCCGATGGAGGAGGATGATTTCATGTTTGAACTCTCAGACAAGCCTCTTCTC
CCTTGCTACAACCTCCAAGTGTCAGTGTCCCGCGGGCCCTGCAACTGGTTCCTCTTTTCCGATGTCTTGA
AGAGGCTGAAGCTTTCCTCGAGGATCTTTCAGGCCCGGTTCCCGCACTTTGAAATCACCACCATGCCCAA
GGCCGAGTTCTACAGGCAGGTGGCCTCCAGTCAGCTGCTGACCCCTGCCGAGAGGCCTGGAGGCTTGGAC
GACAGATCCCCCCCAGGCTCCTCTGAGACTGTGGAGCTGGTGCGGTACGAGCCAGACCTACTTCGGCTCC
TAGGGTCCGAGGTGGAATTCCAGTCTTGCAACAGTTGA

Translation (1785 aa):
MISTAPLYSGVHNWTSSDRIRMCGINEERRAPLSDEESTTGDCQHFGSQEFCVSSSFSKVELTAVGSGSN
ARGADPDGSATEKLGHKSEDKPDDPQPKMDYAGNVAEAEGLLVPLSSPGDGLKLPASDSAEASNSRADCS
WTPLNTQMSKQVDCSPAGVKALDSRQGVGEKNTFILATLGTGVPVEGTLPLVTTNFSPLPAPICPPAPGS
ASVPHSVPDAFQVPLSVPAPVPHSGLVPVQVATSVPAPSPPLAPVPALAPAPPSVPTLISDSNPLSVSAS
VLVPVPASAPPSGPVPLSAPAPAPLSVPVSAPPLALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPAAP
APPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTPAPTPMPAATPAAIPTSAPIPASFSLSRV
CFPAAQAPAMQKVPLSFQPGTVLTPSQPLVYIPPPSCGQPLSVATLPTTLGVSSTLTLPVLPSYLQDRCL
PGVLASPELRSYPYAFSVARPLTSDSKLVSLEVNRLPCTSPSGSTTTQPAPDGVPGPLADTSLVTASAKV
LPTPQPLLPAPSGSSAPPHPAKMPSGTEQQTEGTSVTFSPLKSPPQLEREMASPPECSEMPLDLSSKSNR
QKLPLPNQRKTPPMPVLTPVHTSSKALLSTVLSRSQRTTQAAGGNVTSCLGSTSSPFVIFPEIVRNGDPS
TWVKNSTALISTIPGTYVGVANPVPASLLLNKDPNLGLNRDPRHLPKQEPISIIDQGEPKGTGATCGKKG
SQAGAEGQPSTVKRYTPARIAPGLPGCQTKELSLWKPTGPANIYPRCSVNGKPTSTQVLPVGWSPYHQAS
LLSIGISSAGQLTPSQGAPIRPTSVVSEFSGVPSLSSSEAVHGLPEGQPRPGGSFVPEQDPVTKNKTCRI
AAKPYEEQVNPVLLTLSPQTGTLALSVQPSGGDIRMNQGPEESESHLCSDSTPKMEGPQGACGLKLAGDT
KPKNQVLATYMSHELVLATPQNLPKMPELPLLPHDSHPKELILDVVPSSRRGSSTERPQLGSQVDLGRVK
MEKVDGDVVFNLATCFRADGLPVAPQRGQAEVRAKAGQARVKQESVGVFACKNKWQPDDVTESLPPKKMK
CGKEKDSEEQQLQPQAKAVVRSSHRPKCRKLPSDPQESTKKSPRGASDSGKEHNGVRGKHKHRKPTKPES
QSPGKRADSHEEGSLEKKAKSSFRDFIPVVLSTRTRSQSGSICSSFAGMADSDMGSQEVFPTEEEEEVTP
TPAKRRKVRKTQRDTQYRSHHAQDKSLLSQGRRHLWRAREMPWRTEAARQMWDTNEEEEEEEEEGLLKRK
KRRRQKSRKYQTGEYLTEQEDEQRRKGRADLKARKQKTSSSQSLEHRLRNRNLLLPNKVQGISDSPNGFL
PNNLEEPACLENSEKPSGKRKCKTKHMATVSEEAKGKGRWSQQKTRSPKSPTPVKPTEPCTPSKSRSASS
EEASESPTARQIPPEARRLIVNKNAGETLLQRAARLGYKDVVLYCLQKDSEDVNHRDNAGYTALHEACSR
GWTDILNILLEHGANVNCSAQDGTRPVHDAVVNDNLETIWLLLSYGADPTLATYSGQTAMKLASSDTMKR
FLSDHLSDLQGRAEGDPGVSWDFYSSSVLEEKDGFACDLLHNPPGSSDQEGDDPMEEDDFMFELSDKPLL
PCYNLQVSVSRGPCNWFLFSDVLKRLKLSSRIFQARFPHFEITTMPKAEFYRQVASSQLLTPAERPGGLD
DRSPPGSSETVELVRYEPDLLRLLGSEVEFQSCNS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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