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Report for CCDS94531.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94531.1 Public Homo sapiens 9 CAMSAP1 24 110 108 CCDS HistoryNCBI Gene:157922Re-query CCDS DB by CCDS ID:94531.1Re-query CCDS DB by GeneID:157922See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94531.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000312405.10 ENSP00000312463.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000312405.10Link to Ensembl Protein Viewer:ENSP00000312463.6Re-query CCDS DB by Nucleotide ID:ENST00000312405Re-query CCDS DB by Protein ID:ENSP00000312463
Current member NCBI NM_001411031.1 NP_001397960.1 Accepted alive Link to Nucleotide Sequence:NM_001411031.1Link to Protein Sequence:NP_001397960.1Re-query CCDS DB by Nucleotide ID:NM_001411031Re-query CCDS DB by Protein ID:NP_001397960Link to BLAST:NP_001397960.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001397960.1 1324 Q5T5Y3-2 1324 100% 0 0

Chromosomal Locations for CCDS 94531.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 135811309 135811611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135815097 135815215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135815890 135816005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135817977 135818079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135818408 135818616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135819010 135819146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135820839 135823260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135823950 135824034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135824789 135824880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135827407 135827584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135850137 135850233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135850322 135850435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3975 nt):
ATGGCCGACAGTCTGTATAATATTCGGCTTCTGAGAGAATTCTCCAATGAATATCTTAATAAATGTTTTT
ATCTCACCTTGGAAGATATGCTGTATGCGCCATTAGTGTTGAAGCCGAATGTTATGGTTTTTATTGCGGA
GCTTTTTTGGTGGTTCGAGAATGTCAAGCCAGATTTTGTTCAGCCCAGGGATGTTCAGGAGCTGAAAGAC
GCGAAAACAGTGTTACACCAGAAGAGCAGCCGGCCTCCTGTACCGATCTCCAACGCGACCAAACGCAGTT
TCCTAGGCAGCCCTGCTGCAGGGACCCTGGCTGAGCTGCAGCCCCCCGTGCAGCTGCCGGCGGAAGGCTG
TCACAGGCACTACCTGCACCCGGAAGAACCTGAATACCTCGGGAAAGGAACTGCTGCCTTCAGCCCATCC
CATCCTTTATTGCCACTGAGACAGAAACAGCAGAAATCCATACAGGGAGAGGACATCCCTGATCAGCGAC
ATCGATCGAATTCTTTGACCCGAGTTGATGGTCAGCCTCGAGGAGCAGCAATAGCCTGGCCAGAAAAAAA
AACCAGGCCTGCGTCCCAGCCAACACCTTTTGCTCTACATCACGCTGCGAGTTGTGAAGTGGATCCCAGC
TCTGGCGACAGCATCAGCTTGGCCCGCTCCATCAGCAAAGACAGTTTGGCATCCAACATTGTTAATCTGA
CCCCACAGAACCAGCCACACCCCACGGCCACGAAGAGCCACGGGAAGAGCCTCCTGAGCAATGTCAGTAT
TGAGGATGAGGAAGAGGAGCTTGTGGCTATTGTTAGAGCAGACGTGGTTCCCCAGCAGGCTGACCCGGAG
TTCCCCAGGGCCTCACCCCGGGCCTTAGGCCTTACAGCAAATGCCCGGTCTCCCCAAGGACAGCTGGACA
CCTCGGAAAGTAAGCCTGACAGTTTTTTCTTGGAGCCTTTGATGCCAGCAGTTCTTAAGCCAGCGAAAGA
GAAGCAGGTGATCACCAAGGAGGATGAACGGGGGGAAGGGAGACCGAGGAGCATCGTGTCTAGGAGGCCC
AGCGAGGGCCCCCAGCCTTTGGTACGAAGGAAAATGACTGGCAGTCGCGACTTGAATAGGACTTTTACCC
CGATTCCATGCTCAGAATTCCCCATGGGCATCGACCCCACCGAGACAGGACCACTGTCAGTGGAAACCGC
AGGAGAGGTCTGTGGTGGGCCTCTGGCCCTTGGCGGATTCGATCCGTTCCCCCAGGGACCATCCACGGAT
GGCTTCTTCCTTCATGTAGGCAGGGCCGATGAAGACACCGAGGGAAGGTTATATGTTAGTTGTTCAAAAA
GCCCCAACTCCCACGATTCAGAGCCGTGGACTCTCCTCAGGCAGGATTCTGACTCGGATGTGGTGGACAT
AGAGGAAGCCGAGCACGATTTCATGGGTGAGGCCCATCCTGTGGTTTTCAGCAGATACATTGGGGAGGAA
GAGTCGGCCAAACTGCAGGAGGACATGAAGGTGAAGGAACATGAAGACAAAGATGACGCCAGCGGCCGCT
CGAGCCCCTGCCTGAGCACAGCCTCTCAGATGAGCAGTGTCTCCATGGCGAGTGGGAGCGTGAAGATGAC
CAGCTTTGCGGAGAGGAAGCTCCAGAGACTCAACAGCTGTGAGACCAAGTCCAGCACCAGCAGCTCCCAG
AAGACCACGCCAGATGCGTCTGAGAGCTGCCCAGCCCCTCTGACGACGTGGAGGCAGAAGAGGGAGCAGA
GTCCGAGCCAGCATGGCAAGGATCCCGCCAGCCTCCTGGCATCTGAGCTGGTACAGCTGCACATGCAGCT
GGAGGAGAAGCGCAGGGCCATCGAGGCCCAGAAGAAGAAGATGGAGGCGCTGTCGGCAAGGCAGCGCCTG
AAGCTCGGCAAGGCTGCATTCCTGCATGTGGTGAAGAAGGGCAAGGCCGAGGCTGCCCCACCCCTCAGGC
CGGAGCACTTTGCAAAGGAGTACTCTCAGCACAACGGGGAGGACTGTGGGGACGCTGTTTCCAAAACCGA
AGACTTTCTCGTGAAGGAGGAGCAGAGAGAGGAGCTCCTTCACGAGCCACAGGATGTGGACAAAGAGAGC
CTGGCCTTTGCTCAGCAACATAAAGCAAAAGACCCTGTGGCTCTGCACGAGCTGGAGAGAAATAAGGTGA
TCTCCGCTGCCCTCCTGGAGGACACTGTTGGGGAGGTTGTCGACGTGAATGAATGTGACCTTTCCATCGA
GAAGCTTAACGAAACCATCAGTACGCTGCAGCAGGCCATCCTGAAAATCTCTCAGCAGCAAGAGCAGCTT
CTGATGAAGTCCCCCACAGTCCCAGTGCCAGGCTCTAAGAATAACTCGCAGGACCACAAAGTGAAGGCAC
CAGTCCACTTCGTGGAGCCACTCTCTCCCACGGGCGTGGCTGGCCACCGCAAAGCCCCCCGGCTGGGTCA
AGGCCGGAATTCCCGTTCCGGAAGGCCGGCGGAGCTGAAGGTCCCAAAAGACAGGCCACAGGGCTCCTCC
CGAAGTAAAACCCCAACGCCCAGTGTAGAGACGCTCCCGCACTTGAGACCCTTCCCTGCCAGCAGCCACC
CTCGGACGCCCACGGACCCTGGCCTGGACAGTGCCCTGGAGCCCAGTGGTGACCCACATGGGAAGTGTCT
CTTCGACAGTTACAGGCTCCATGATGAAAGCAATCAGCGGACACTTACTCTGTCCTCTTCCAAAGATGCC
AACATTCTTTCGGAGCAGATGAGCCTCAAAGAAGTTCTGGATGCGAGTGTGAAGGAGGTGGGGTCCAGCT
CCTCAGATGTCTCGGGAAAAGAGAGCGTCCCCGTGGAGGAGCCTCTGAGGAGCAGGGCCAGCCTCATTGA
AGTGGACCTCTCCGACCTGAAGGCCCCCGACGAGGATGGGGAGCTGGTAAGCCTCGATGGCTCGGCGGAC
CTTGTCAGCGAAGGCGACCAGAAGCCGGGGGTCGGCTTCTTCTTCAAGGATGAACAGAAAGCGGAAGATG
AGCTCGCCAAGAAGCGGGCGGCCTTCCTCCTGAAGCAGCAGCGCAAGGCCGAGGAGGCCCGCGTGCGCAA
GCAGCAGCTGGAAGCGGAGGTGGAGCTCAAGCGTGACGAAGCCCGGCGCAAAGCTGAGGAAGACCGGGTG
CGGAAGGAGGAGGAGAAGGCGCGGCGCGAGCTCATCAAGCAGGAGTACCTGCGGAGGAAGCAGCAGCAGA
TCCTAGAGGAGCAGGGGCTCGGCAAGCCCAAGTCAAAGCCGAAGAAGCCGCGGCCGAAGTCGGTGCACCG
GGAAGAGTCGTGCAGCGACTCCGGCACCAAGTGCTCCTCCACCCCTGATAACTTGAGCCGGACTCAGTCA
GGCTCCAGCCTGTCCTTGGCCTCTGCGGCGACGACAGAACCCGAGAGCGTTCATTCCGGGGGCACACCCT
CTCAGCGAGTGGAATCGATGGAAGCCCTGCCCATACTGAGCCGTAACCCAAGCAGGAGCACAGACCGAGA
CTGGGAGACCGCGTCGGCGGCATCTTCCCTGGCCTCAGTGGCCGAGTACACAGGTCCCAAGCTCTTTAAG
GAGCCCAGTAGTAAATCAAACAAGCCGATTATTCACAATGCCATATCCCATTGCTGCCTGGCTGGAAAAG
TGAACGAACCCCACAAGAATTCCATATTGGAGGAGCTGGAGAAGTGTGATGCCAATCACTACATCATACT
GTTTCGTGATGCTGGCTGCCAGTTCAGGGCGCTTTACTGCTACTATCCTGATACTGAGGAAATCTACAAA
CTCACTGGCACGGGGCCAAAGAACATCACCAAGAAAATGATCGACAAACTGTATAAATACAGCTCAGACC
GAAAACAGTTTAACTTGATCCCAGCCAAAACCATGTCTGTCAGTGTGGACGCACTCACAATCCACAACCA
CCTGTGGCAGCCCAAGCGGCCTGCAGTGCCAAAGAAGGCCCAGACTCGTAAATGA

Translation (1324 aa):
MADSLYNIRLLREFSNEYLNKCFYLTLEDMLYAPLVLKPNVMVFIAELFWWFENVKPDFVQPRDVQELKD
AKTVLHQKSSRPPVPISNATKRSFLGSPAAGTLAELQPPVQLPAEGCHRHYLHPEEPEYLGKGTAAFSPS
HPLLPLRQKQQKSIQGEDIPDQRHRSNSLTRVDGQPRGAAIAWPEKKTRPASQPTPFALHHAASCEVDPS
SGDSISLARSISKDSLASNIVNLTPQNQPHPTATKSHGKSLLSNVSIEDEEEELVAIVRADVVPQQADPE
FPRASPRALGLTANARSPQGQLDTSESKPDSFFLEPLMPAVLKPAKEKQVITKEDERGEGRPRSIVSRRP
SEGPQPLVRRKMTGSRDLNRTFTPIPCSEFPMGIDPTETGPLSVETAGEVCGGPLALGGFDPFPQGPSTD
GFFLHVGRADEDTEGRLYVSCSKSPNSHDSEPWTLLRQDSDSDVVDIEEAEHDFMGEAHPVVFSRYIGEE
ESAKLQEDMKVKEHEDKDDASGRSSPCLSTASQMSSVSMASGSVKMTSFAERKLQRLNSCETKSSTSSSQ
KTTPDASESCPAPLTTWRQKREQSPSQHGKDPASLLASELVQLHMQLEEKRRAIEAQKKKMEALSARQRL
KLGKAAFLHVVKKGKAEAAPPLRPEHFAKEYSQHNGEDCGDAVSKTEDFLVKEEQREELLHEPQDVDKES
LAFAQQHKAKDPVALHELERNKVISAALLEDTVGEVVDVNECDLSIEKLNETISTLQQAILKISQQQEQL
LMKSPTVPVPGSKNNSQDHKVKAPVHFVEPLSPTGVAGHRKAPRLGQGRNSRSGRPAELKVPKDRPQGSS
RSKTPTPSVETLPHLRPFPASSHPRTPTDPGLDSALEPSGDPHGKCLFDSYRLHDESNQRTLTLSSSKDA
NILSEQMSLKEVLDASVKEVGSSSSDVSGKESVPVEEPLRSRASLIEVDLSDLKAPDEDGELVSLDGSAD
LVSEGDQKPGVGFFFKDEQKAEDELAKKRAAFLLKQQRKAEEARVRKQQLEAEVELKRDEARRKAEEDRV
RKEEEKARRELIKQEYLRRKQQQILEEQGLGKPKSKPKKPRPKSVHREESCSDSGTKCSSTPDNLSRTQS
GSSLSLASAATTEPESVHSGGTPSQRVESMEALPILSRNPSRSTDRDWETASAASSLASVAEYTGPKLFK
EPSSKSNKPIIHNAISHCCLAGKVNEPHKNSILEELEKCDANHYIILFRDAGCQFRALYCYYPDTEEIYK
LTGTGPKNITKKMIDKLYKYSSDRKQFNLIPAKTMSVSVDALTIHNHLWQPKRPAVPKKAQTRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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