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Report for CCDS94471.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94471.1 Public Homo sapiens 9 FBXW2 24 110 108 CCDS HistoryNCBI Gene:26190Re-query CCDS DB by CCDS ID:94471.1Re-query CCDS DB by GeneID:26190See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94471.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000684405.1 ENSP00000508243.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000684405.1Link to Ensembl Protein Viewer:ENSP00000508243.1Re-query CCDS DB by Nucleotide ID:ENST00000684405Re-query CCDS DB by Protein ID:ENSP00000508243
Original member Current member NCBI NM_001375889.1 NP_001362818.1 Accepted alive Link to Nucleotide Sequence:NM_001375889.1Link to Protein Sequence:NP_001362818.1Re-query CCDS DB by Nucleotide ID:NM_001375889Re-query CCDS DB by Protein ID:NP_001362818Link to BLAST:NP_001362818.1

Chromosomal Locations for CCDS 94471.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 120764559 120764847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 120771348 120771517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 120772754 120772840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 120776093 120776226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 120778351 120778545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 120787769 120787871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (978 nt):
ATGAAGCAACTGGAGGACCATGAAGCCTTTGAAACCTCGTCATTAATTGGACACAGTGCCAGAGTGTATG
CACTTTACTACAAAGATGGACTTCTCTGTACAGGGTCAGATGACTTGTCTGCAAAGCTGTGGGATGTGAG
CACAGGGCAGTGCGTTTATGGCATCCAGACCCACACTTGTGCAGCGGTGAAGTTTGATGAACAGAAGCTT
GTGACAGGCTCCTTTGACAACACTGTGGCTTGCTGGGAATGGAGTTCCGGAGCCAGGACCCAGCACTTTC
GGGGGCACACGGGGGCGGTATTTAGCGTGGACTACAATGATGAACTGGATATCTTGGTGAGCGGCTCTGC
AGACTTCACTGTGAAAGTATGGGCTTTATCTGCTGGGACATGCCTGAACACACTCACCGGGCACACGGAA
TGGGTCACCAAGGTAGTTTTGCAGAAGTGCAAAGTCAAGTCTCTCTTGCACAGTCCTGGAGACTACATCC
TCTTAAGTGCAGACAAATATGAGATTAAGATTTGGCCAATTGGGAGAGAAATCAACTGTAAGTGCTTAAA
GACATTGTCTGTCTCTGAGGATAGAAGTATCTGCCTGCAGCCAAGACTTCATTTTGATGGCAAATACATT
GTCTGTAGTTCAGCACTTGGTCTCTACCAGTGGGACTTTGCCAGTTATGATATTCTCAGGGTCATCAAGA
CTCCTGAGATAGCAAACTTGGCCTTGCTTGGCTTTGGAGATATCTTTGCCCTGCTGTTTGACAACCGCTA
CCTGTACATCATGGACTTGCGGACAGAGAGCCTGATTAGTCGCTGGCCTCTGCCAGAGTACAGGAAATCA
AAGAGAGGCTCAAGCTTCCTGGCAGGCGAAGCATCCTGGCTGAATGGACTGGATGGGCACAATGACACGG
GCTTGGTCTTTGCCACCAGCATGCCTGACCACAGTATTCACCTGGTGTTGTGGAAGGAGCACGGCTGA

Translation (325 aa):
MKQLEDHEAFETSSLIGHSARVYALYYKDGLLCTGSDDLSAKLWDVSTGQCVYGIQTHTCAAVKFDEQKL
VTGSFDNTVACWEWSSGARTQHFRGHTGAVFSVDYNDELDILVSGSADFTVKVWALSAGTCLNTLTGHTE
WVTKVVLQKCKVKSLLHSPGDYILLSADKYEIKIWPIGREINCKCLKTLSVSEDRSICLQPRLHFDGKYI
VCSSALGLYQWDFASYDILRVIKTPEIANLALLGFGDIFALLFDNRYLYIMDLRTESLISRWPLPEYRKS
KRGSSFLAGEASWLNGLDGHNDTGLVFATSMPDHSIHLVLWKEHG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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