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Report for CCDS94307.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94307.1 Public Homo sapiens 8 CSPP1 24 110 108 CCDS HistoryNCBI Gene:79848Re-query CCDS DB by CCDS ID:94307.1Re-query CCDS DB by GeneID:79848See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 94307.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000678616.1 ENSP00000504733.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000678616.1Link to Ensembl Protein Viewer:ENSP00000504733.1Re-query CCDS DB by Nucleotide ID:ENST00000678616Re-query CCDS DB by Protein ID:ENSP00000504733
Original member Current member NCBI NM_001382391.1 NP_001369320.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001382391.1Link to Protein Sequence:NP_001369320.1Re-query CCDS DB by Nucleotide ID:NM_001382391Re-query CCDS DB by Protein ID:NP_001369320Link to BLAST:NP_001369320.1

Chromosomal Locations for CCDS 94307.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 67074253 67074351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67076482 67076581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67086007 67086110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67091803 67091883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67093543 67093641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67095293 67095732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67103037 67103135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67105905 67105975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67111972 67112065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67113805 67113862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67114329 67114370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67115914 67116122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67118248 67118369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67118743 67118821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67131951 67132080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67137456 67137603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67149783 67149935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67154024 67154136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67158447 67158596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67158991 67159137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67161811 67161915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67163732 67163798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67164391 67164508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67172416 67172555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67175296 67175436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67177680 67177726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67179863 67179926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67190650 67190759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67193464 67193602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 67195382 67195593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3681 nt):
ATGGCTGATAATTTGGATGAATTTATTGAAGAGCAAAAAGCCAGATTGGCCGAAGACAAAGCAGAGTTGG
AAAGTGATCCACCTTACATGGAAATGAAGGGAAAGTTGTCAGCGAAGCTTTCTGAAAACAGTAAGATACT
GATCTCTATGGCTAAGGAAAACATACCACCAAATAGTCAACAGACCAGGGGTTCCTTAGGAATTGATTAT
GGATTAAGTTTACCACTTGGAGAAGACTATGAACGGAAGAAACATAAATTAAAAGAAGAATTGCGGCAAG
ATTACAGACGTTATCTTACTCAGAAAAATTTTCTATCTACGAGTGAAACAGATCCATCTACTTTGGGAGT
TTCTCTTCCTATTGGTGAGAGGTTATCTGCTAAGGAAAGGTTGAAACTTGAACGTAACAAAGAATACAAT
CAGTTTCTCAGGGGTAAGGAAGAATCCAGTGAAAAGTTCAGGCAGGTGGAAAAGAGTACTGAGCCCAAGA
GTCAGAGAAATAAAAAACCTATTGGTCAAGTTAAGCCTGATCTAACTTCACAAATACAGACATCTTGTGA
AAATTCAGAGGGTCCTAGAAAAGATGTCTTAACTCCTTCAGAGGCATATGAAGAACTTCTGAACCAAAGA
CGACTAGAGGAGGACAGATACCGACAACTAGATGATGAAATCGAATTAAGGAATAGAAGAATTATTAAAA
AAGCAAATGAAGAAGTGGGCATTTCCAACCTAAAACATCAAAGGTTTGCAAGCAAGGCTGGCATTCCAGA
TAGAAGATTTCACAGATTTAATGAGGATCGTGTTTTTGATAGACGGTATCATAGACCAGACCAAGATCCT
GAAGTAAGTGAAGAAATGGATGAGAGGTTTAGATATGAAAGTGATTTTGATAGAAGACTTTCGAGAGTGT
ATACAAATGACAGGATGCACAGGAACAAACGAGGGAATATGCCTCCTATGGAACATGATGGGGATGTTAT
AGAACAGTCAAACATAAGAATTTCATCTGCTGAAAATAAAAGTGCTCCAGACAATGAAACATCCAAATCT
GCTAATCAAGATACCTGTAGTCCTTTTGCAGGGATGCTCTTTGGAGGTGAAGATCGAGAACTTATTCAGA
GAAGGAAAGAGAAATACAGACTAGAACTGTTGGAACAAATGGCTGAGCAACAGAGGAACAAGAGACGAGA
AAAAGATTTAGAACTCAGGGTTGCAGCGTCTGGAGCACAAGACCCTGAGAAATCGTGGAATGAATTACTC
ACATCATTGCAGTTAAGTAAGGAGGAGCCTGATAGACTAAAGCAGTTTAGTGTGGCACCAAGACACTTTG
AAGAGATGATACCACCTGAAAGACCCAGAATAGCTTTCCAGACACCTCTCCCTCCTTTATCTGCCCCATC
TGTCCCACCCATCCCATCAGTTCATCCTGTTCCTTCTCAAAATGAAGATTTGCGCAGTGGACTCAGCAGC
GCCCTTGGTGAAATGGTGTCTCCCAGGATTGCACCTCTGCCTCCACCTCCCCTACTACCACCTTTGGCTA
CTAACTATCGAACTCCTTATGATGATGCATACTATTTTTATGGGTCCAGGAATACTTTCGATCCCAGTCT
TGCTTATTATGGTTCAGGAATGATGGGCGTACAGCCTGCAGCTTATGTTAGTGCTCCTGTCACCCACCAA
CTAGCACAACCTGTTGTGAATACGGTTGGACAGAATGAACTGAAGATTACAAGTGATCAAGTGATAAATT
CAGGATTGATTTTTGAAGATAAACCGAAACCTTCCAAACAGTCACTTCAGTCTTACCAAGAGGCTTTGCA
GCAGCAGATTCGGGAAAGAGAAGAAAGAAGGAAGAAAGAACGTGAAGAAAAAGAAGAATATGAAGCTAAA
TTAGAAGCTGAAATGAGAACATATAATCCCTGGGGAAAAGGTGGAGGTGGTGCTCCTCTCAGGGATGCAA
AAGGAAATCTGATAACTGATTTGAATAGGATGCACAGACAAAATATAGATGCCTACCATAACCCAGATGC
AAGAACATATGAAGATAAAAGGGCTGTTGTATCTCTAGACCCAAATTTAGCCACTTCAAATGCTGAGAAC
CTAGAAGATGCTGCAAATAAAAGCTCAGGTCATATGCAAACACAGAGCTCTCCTTTTGCTCGGGGAAATG
TATTTGGTGAGCCTCCAACTGAACTTCAGATTAAACAGCAAGAATTATACAAGAATTTTCTTCGTTTCCA
GATTGAGGAAAAGAAACAAAGAGAGGAAGCAGAGCGAGAGAGACTGAGAATTGCAGAAGAAAAAGAAGAA
AGACGGCTTGCAGAACAGAGGGCACGAATTCAGCAGGAGTATGAAGAGGAACAGGAAAAGAAAAGAGAGA
AAGAGGAGGAGCAAAGGCTAAAAAATGAAGAGCATATTCGGTTAGCTGAAGAAAGACAAAAAGAAGCAGA
AAGAAAGAAGAAAGAAGAAGAAGAAAAATATAACCTGCAACTTCAGCACTACTGTGAAAGAGACAATTTG
ATTGGGGAAGAAACAAAGCACATGAGACAGCCTTCTCCTATAGTTCCTGCTCTTCAGAACAAAATTGCAA
GCAAACTCCAAAGACCTCCTTCAGTTGACAGCATCATACGTTCCTTTATTCATGAAAGTTCCATGTCCAG
GGCACAGTCACCCCCGGTACCTGCCAGGAAAAATCAGCTCCGTGCAGAAGAGGAGAAAAAAAATGTAATT
ATGGAATTATCAGAAATGAGAAAACAGCTTCGTAGTGAAGAGAGGCGTCTACAAGAGCGATTGCTACACA
TGGACAGTGATGATGAAATTCCTATCAGGAAAAAGGAAAGGAATCCCATGGATATATTTGATATGGCTAG
ACATCGGTTGCAAGCTCCTGTCAGAAGACAGTCCCCTAAGGGCTTAGACGCTGCCACTTTTCAGAATGTT
CATGATTTTAATGAGCTGAAAGATAGAGATTCAGAAACACGAGTTGATCTGAAATTTATGTACCTGGATC
CTCCAAGAGATCATCACACCTTAGAGATTCAGCAGCAAGCCCTGCTAAGAGAGCAGCAGAAGAGGCTGAA
CAGAATAAAAATGCAGGAAGGTGCCAAAGTTGACTTAGATGCCATCCCAAGTGCTAAAGTACGAGAGCAA
AGAATGCCCAGAGATGACACTAGTGATTTCTTGAAAAACTCATTATTGGAATCTGATAGTGCTTTTATTG
GGGCTTACGGTGAGACATATCCTGCCATTGAAGATGACGTCCTCCCTCCACCATCACAGTTGCCCTCTGC
ACGGGAGCGCAGGAGGAACAAATGGAAAGGACTAGACATTGATAGCAGTCGTCCTAATGTAGCACCAGAT
GGTCTCTCTCTAAAATCTATATCCAGTGTAAATGTTGATGAGCTTAGAGTGAGAAATGAGGAACGAATGC
GAAGACTGAATGAATTTCACAATAAACCTATTAATACAGATGATGAGAGTTCACTGGTTGACCCTGATGA
CATCATGAAACACATAGGGGATGACGGATCAAACTCTGTAGCAACTGAGCCCTGGCTCCGCCCTGGCACT
TCAGAAACGCTGAAACGTTTCATGGCAGAGCAGCTGAACCAGGAGCAGCAGCAGATTCCTGGAAAACCAG
GCACTTTCACTTGGCAGGGCCTGTCGACTGCACATGGTTAA

Translation (1226 aa):
MADNLDEFIEEQKARLAEDKAELESDPPYMEMKGKLSAKLSENSKILISMAKENIPPNSQQTRGSLGIDY
GLSLPLGEDYERKKHKLKEELRQDYRRYLTQKNFLSTSETDPSTLGVSLPIGERLSAKERLKLERNKEYN
QFLRGKEESSEKFRQVEKSTEPKSQRNKKPIGQVKPDLTSQIQTSCENSEGPRKDVLTPSEAYEELLNQR
RLEEDRYRQLDDEIELRNRRIIKKANEEVGISNLKHQRFASKAGIPDRRFHRFNEDRVFDRRYHRPDQDP
EVSEEMDERFRYESDFDRRLSRVYTNDRMHRNKRGNMPPMEHDGDVIEQSNIRISSAENKSAPDNETSKS
ANQDTCSPFAGMLFGGEDRELIQRRKEKYRLELLEQMAEQQRNKRREKDLELRVAASGAQDPEKSWNELL
TSLQLSKEEPDRLKQFSVAPRHFEEMIPPERPRIAFQTPLPPLSAPSVPPIPSVHPVPSQNEDLRSGLSS
ALGEMVSPRIAPLPPPPLLPPLATNYRTPYDDAYYFYGSRNTFDPSLAYYGSGMMGVQPAAYVSAPVTHQ
LAQPVVNTVGQNELKITSDQVINSGLIFEDKPKPSKQSLQSYQEALQQQIREREERRKKEREEKEEYEAK
LEAEMRTYNPWGKGGGGAPLRDAKGNLITDLNRMHRQNIDAYHNPDARTYEDKRAVVSLDPNLATSNAEN
LEDAANKSSGHMQTQSSPFARGNVFGEPPTELQIKQQELYKNFLRFQIEEKKQREEAERERLRIAEEKEE
RRLAEQRARIQQEYEEEQEKKREKEEEQRLKNEEHIRLAEERQKEAERKKKEEEEKYNLQLQHYCERDNL
IGEETKHMRQPSPIVPALQNKIASKLQRPPSVDSIIRSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVI
MELSEMRKQLRSEERRLQERLLHMDSDDEIPIRKKERNPMDIFDMARHRLQAPVRRQSPKGLDAATFQNV
HDFNELKDRDSETRVDLKFMYLDPPRDHHTLEIQQQALLREQQKRLNRIKMQEGAKVDLDAIPSAKVREQ
RMPRDDTSDFLKNSLLESDSAFIGAYGETYPAIEDDVLPPPSQLPSARERRRNKWKGLDIDSSRPNVAPD
GLSLKSISSVNVDELRVRNEERMRRLNEFHNKPINTDDESSLVDPDDIMKHIGDDGSNSVATEPWLRPGT
SETLKRFMAEQLNQEQQQIPGKPGTFTWQGLSTAHG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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