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Report for CCDS94296.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94296.1 Public Homo sapiens 8 NKAIN3 24 110 108 CCDS HistoryNCBI Gene:286183Re-query CCDS DB by CCDS ID:94296.1Re-query CCDS DB by GeneID:286183See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94296.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000623646.3 ENSP00000501908.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000623646.3Link to Ensembl Protein Viewer:ENSP00000501908.1Re-query CCDS DB by Nucleotide ID:ENST00000623646Re-query CCDS DB by Protein ID:ENSP00000501908
Original member Current member NCBI NM_001304533.3 NP_001291462.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001304533.3Link to Protein Sequence:NP_001291462.1Re-query CCDS DB by Nucleotide ID:NM_001304533Re-query CCDS DB by Protein ID:NP_001291462Link to BLAST:NP_001291462.1

Chromosomal Locations for CCDS 94296.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 62249074 62249127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 62579539 62579676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 62589714 62589794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 62746932 62747129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 62918453 62918513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 62953902 62953972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 62965354 62965407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (657 nt):
ATGGGCTGCTGCACCGGACGCTGCTCGCTCATCTGCCTCTGCGCGCTGCAGTTGGTCTCAGCATTAGAGA
GGCAGATCTTTGACTTCCTTGGTTTCCAGTGGGCGCCTATTCTTGGAAATTTTCTACACATAATAGTTGT
CATATTGGGTTTGTTTGGGACCATTCAGTACAGACCTCGATACATAATGGTGTATACAGTGTGGACTGCC
CTCTGGGTCACCTGGAATGTGTTCATTATCTGCTTTTATTTGGAAGTAGGTGGACTCTCAAAGGACACCG
ATCTAATGACATTCAATATCTCTGTACATCGGTCATGGTGGAGAGAACATGGGCCTGGTTGTGTCAGAAG
AGTGCTGCCTCCCTCAGCCCATGGCATGATGGACGATTACACGTACGTCTCTGTCACAGGCTGCATCGTT
GACTTCCAGTACCTGGAGGTCATCCACAGTGCTGTCCAAATACTACTCTCTTTGGTGGGTTTTGTGTATG
CCTGTTATGTGATCAGTATTTCCATGGAAGAAGAAGACACATTTGATTTCATAGGTGGACTTGATACACA
CTCCTACTACCAGGATCATGTTGAGTTAAAGCCTGTTAAACCAGTCGAAATAAGTAATGACATTGAACCA
GAAATGCGGCTGCTGAACTTGACTTAG

Translation (218 aa):
MGCCTGRCSLICLCALQLVSALERQIFDFLGFQWAPILGNFLHIIVVILGLFGTIQYRPRYIMVYTVWTA
LWVTWNVFIICFYLEVGGLSKDTDLMTFNISVHRSWWREHGPGCVRRVLPPSAHGMMDDYTYVSVTGCIV
DFQYLEVIHSAVQILLSLVGFVYACYVISISMEEEDTFDFIGGLDTHSYYQDHVELKPVKPVEISNDIEP
EMRLLNLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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