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Report for CCDS9414.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9414.1 Public Homo sapiens 13 MLNR 24 110 108 CCDS HistoryNCBI Gene:2862Re-query CCDS DB by CCDS ID:9414.1Re-query CCDS DB by GeneID:2862See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9414.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000218721.1 ENSP00000218721.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000218721.1Link to Ensembl Protein Viewer:ENSP00000218721.1Re-query CCDS DB by Nucleotide ID:ENST00000218721Re-query CCDS DB by Protein ID:ENSP00000218721
Original member Current member NCBI NM_001507.1 NP_001498.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001507.1Link to Protein Sequence:NP_001498.1Re-query CCDS DB by Nucleotide ID:NM_001507Re-query CCDS DB by Protein ID:NP_001498Link to BLAST:NP_001498.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001498.1 412 O43193-1 412 100% 0 0

Chromosomal Locations for CCDS 9414.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 49220338 49221238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 49222040 49222377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1239 nt):
ATGGGCAGCCCCTGGAACGGCAGCGACGGCCCCGAGGGGGCGCGGGAGCCGCCGTGGCCCGCGCTGCCGC
CTTGCGACGAGCGCCGCTGCTCGCCCTTTCCCCTGGGGGCGCTGGTGCCGGTGACCGCTGTGTGCCTGTG
CCTGTTCGTCGTCGGGGTGAGCGGCAACGTGGTGACCGTGATGCTGATCGGGCGCTACCGGGACATGCGG
ACCACCACCAACTTGTACCTGGGCAGCATGGCCGTGTCCGACCTACTCATCCTGCTCGGGCTGCCGTTCG
ACCTGTACCGCCTCTGGCGCTCGCGGCCCTGGGTGTTCGGGCCGCTGCTCTGCCGCCTGTCCCTCTACGT
GGGCGAGGGCTGCACCTACGCCACGCTGCTGCACATGACCGCGCTCAGCGTCGAGCGCTACCTGGCCATC
TGCCGCCCGCTCCGCGCCCGCGTCTTGGTCACCCGGCGCCGCGTCCGCGCGCTCATCGCTGTGCTCTGGG
CCGTGGCGCTGCTCTCTGCCGGTCCCTTCTTGTTCCTGGTGGGCGTCGAGCAGGACCCCGGCATCTCCGT
AGTCCCGGGCCTCAATGGCACCGCGCGGATCGCCTCCTCGCCTCTCGCCTCGTCGCCGCCTCTCTGGCTC
TCGCGGGCGCCACCGCCGTCCCCGCCGTCGGGGCCCGAGACCGCGGAGGCCGCGGCGCTGTTCAGCCGCG
AATGCCGGCCGAGCCCCGCGCAGCTGGGCGCGCTGCGTGTCATGCTGTGGGTCACCACCGCCTACTTCTT
CCTGCCCTTTCTGTGCCTCAGCATCCTCTACGGGCTCATCGGGCGGGAGCTGTGGAGCAGCCGGCGGCCG
CTGCGAGGCCCGGCCGCCTCGGGGCGGGAGAGAGGCCACCGGCAGACCGTCCGCGTCCTGCTGGTGGTGG
TTCTGGCATTTATAATTTGCTGGTTGCCCTTCCACGTTGGCAGAATCATTTACATAAACACGGAAGATTC
GCGGATGATGTACTTCTCTCAGTACTTTAACATCGTCGCTCTGCAACTTTTCTATCTGAGCGCATCTATC
AACCCAATCCTCTACAACCTCATTTCAAAGAAGTACAGAGCGGCGGCCTTTAAACTGCTGCTCGCAAGGA
AGTCCAGGCCGAGAGGCTTCCACAGAAGCAGGGACACTGCGGGGGAAGTTGCAGGGGACACTGGAGGAGA
CACGGTGGGCTACACCGAGACAAGCGCTAACGTGAAGACGATGGGATAA

Translation (412 aa):
MGSPWNGSDGPEGAREPPWPALPPCDERRCSPFPLGALVPVTAVCLCLFVVGVSGNVVTVMLIGRYRDMR
TTTNLYLGSMAVSDLLILLGLPFDLYRLWRSRPWVFGPLLCRLSLYVGEGCTYATLLHMTALSVERYLAI
CRPLRARVLVTRRRVRALIAVLWAVALLSAGPFLFLVGVEQDPGISVVPGLNGTARIASSPLASSPPLWL
SRAPPPSPPSGPETAEAAALFSRECRPSPAQLGALRVMLWVTTAYFFLPFLCLSILYGLIGRELWSSRRP
LRGPAASGRERGHRQTVRVLLVVVLAFIICWLPFHVGRIIYINTEDSRMMYFSQYFNIVALQLFYLSASI
NPILYNLISKKYRAAAFKLLLARKSRPRGFHRSRDTAGEVAGDTGGDTVGYTETSANVKTMG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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