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Report for CCDS94136.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94136.1 Public Homo sapiens 7 TMEM243 24 110 108 CCDS HistoryNCBI Gene:79161Re-query CCDS DB by CCDS ID:94136.1Re-query CCDS DB by GeneID:79161See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94136.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000423734.1 ENSP00000407976.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000423734.1Link to Ensembl Protein Viewer:ENSP00000407976.1Re-query CCDS DB by Nucleotide ID:ENST00000423734Re-query CCDS DB by Protein ID:ENSP00000407976
Current member NCBI NM_001410901.1 NP_001397830.1 Accepted alive Link to Nucleotide Sequence:NM_001410901.1Link to Protein Sequence:NP_001397830.1Re-query CCDS DB by Nucleotide ID:NM_001410901Re-query CCDS DB by Protein ID:NP_001397830Link to BLAST:NP_001397830.1

Chromosomal Locations for CCDS 94136.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 87197815 87198045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87199007 87199057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 87219426 87219503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (360 nt):
ATGGAGGACTTTGCTACCAGGACCTACGGCACCAGTGGCCTGGACAACAGACCTCTGTTTGGGGAGACGT
CCGCCAAGGATCGAATCATCAATTTAGTTGTTGGCAGCTTAACATCCTTATTGATTCTAGTAACGCTGAT
AAGTGCTTTTGTTTTCCCTCAACTACCTCCAAAACCGTTGAATATATTCTTTGCTGTCTGCATCTCTTTG
AGTAGTATTACTGCCTGCATACTTGTAAGTACTGTTGAGAATTTAAACAGTGTTCTTGAGGGTTTAAGTT
GCAATGCACAGGACAAAAATTTTCAGCCTTGGGTCTATACAAAAGGGTATCTCTTAATTATATCCTCATC
CTCCCCCTAA

Translation (119 aa):
MEDFATRTYGTSGLDNRPLFGETSAKDRIINLVVGSLTSLLILVTLISAFVFPQLPPKPLNIFFAVCISL
SSITACILVSTVENLNSVLEGLSCNAQDKNFQPWVYTKGYLLIISSSSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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