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Report for CCDS94074.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94074.1 Public Homo sapiens 7 WIPF3 24 110 108 CCDS HistoryNCBI Gene:644150Re-query CCDS DB by CCDS ID:94074.1Re-query CCDS DB by GeneID:644150See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94074.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409123.5 ENSP00000386790.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409123.5Link to Ensembl Protein Viewer:ENSP00000386790.1Re-query CCDS DB by Nucleotide ID:ENST00000409123Re-query CCDS DB by Protein ID:ENSP00000386790
Original member Current member NCBI NM_001391973.1 NP_001378902.1 Accepted alive Link to Nucleotide Sequence:NM_001391973.1Link to Protein Sequence:NP_001378902.1Re-query CCDS DB by Nucleotide ID:NM_001391973Re-query CCDS DB by Protein ID:NP_001378902Link to BLAST:NP_001378902.1

Chromosomal Locations for CCDS 94074.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 29834725 29834814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29875830 29875962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29879009 29879140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29883850 29884593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29888068 29888217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29889306 29889407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 29904286 29904386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1452 nt):
ATGCCAGTGCCACCGCCACCCCCACCTCCTCTGCCTCCACCTCCCCCGCCTCTGGGGGCTCCTCCCCCTC
CCCCACCATCAGCACCCCCGGTAAGCACAGACACCTCCAGCTTGCGAAGGGCAGATCCGAAAGGCCGGAG
TGCGCTGTTGGCTGATATCCAGCAAGGAACTCGCCTGCGCAAAGTCACGCAGATCAACGACCGCAGTGCC
CCGCAGATCGAGAGTTCTAAAGGAACCAACAAAGAAGGAGGAGGTTCTGCAAACACACGAGGCGCGAGCA
CACCTCCCACCCTGGGAGATCTGTTTGCTGGTGGCTTTCCTGTATTGCGACCAGCAGGCCAGCGGGATGT
AGCAGGTGGCAAGACAGGGCAGGGCCCTGGCTCCCGCGCGCCCTCTCCCAGGCTTCCCAACAAAACCATC
AGCGGCCCGCTTATCCCGCCTGCCTCTCCCAGGCTAGGCAATACCTCCGAGGCGCATGGCGCTGCCAGGA
CAGCCCCGCCTCGCCCCAACGTGCCTGCCCCGCCCCCTCCCACCCCACCCCCTCCGCCTCCACCCTTACC
CCCGCCCCTTCCCTCTTCCTCCCCCATCAAAACTCCGCTTGTGTCCCCACCCGGCCCACTGACCAAAGGG
AACCTCCCGGTGGTTGCACCCCCCGTCCCCTGTGCGCCACCACCTCCACCTCCGCCACCTCCCCCAACGC
CACCCCCGCTGCCCCCGGCCTCGGTTCTTAGTGACAAGGCAGTGAAGCCTCAGCTGGCTCCCTTGCACCT
CCCGCCCATCCCGCCCCCGCTCCCTCTGCTCCCACCTTGTGGGTATCCGGGGCTCAAAGCGGAGCCCGCC
AGCCCTGCGCAAGATGCGCAGGAGCCTCCCGCCCCGCCGCCCCCGCTCCCCCCTTATGCTTCTTGCTCCC
CGAGGGCTTCTTTGCCCGCGCCCCCTTTGCCAGGAGTTAATAGCAGCAGTGAAACTCCACCCCCGCTACC
CCCTAAATCCCCCAGCTTCCAGGCCCCACCGCAGAAGGCCGGTGCGCAGGCCTTGCCCGCCCCGCCTGCC
CCTCCGGGCTCCCAGCCGTTCCTGCAGAAGAAGAGGCATGGCCGACCAGGGGCCGGTGGGGGAAAGCTAA
ATCCACCTCCAGCACCCCCTGCGAGATCACCTACCACAGAGCTTTCAAGCAAGAGCCAGCAGGCCACAGC
CTGGACCCCGACGCAGCAGCCTGGAGGTCAACTGCGAAATGGAAGCCTGCACATCATTGATGACTTCGAG
TCTAAATTCACGTTCCATTCTGTGGAAGACTTTCCCCCTCCGGATGAATATAAACCATGCCAGAAGATTT
ACCCCAGCAAGATCCCCAGAAGCCGTACACCTGGTCCCTGGCTCCAAGCGGAAGCAGTCGGGCAGAGCTC
TGATGACATCAAAGGCAGAAATTCTCAGGTAACACAAGCCTCATGTCTCTGA

Translation (483 aa):
MPVPPPPPPPLPPPPPPLGAPPPPPPSAPPVSTDTSSLRRADPKGRSALLADIQQGTRLRKVTQINDRSA
PQIESSKGTNKEGGGSANTRGASTPPTLGDLFAGGFPVLRPAGQRDVAGGKTGQGPGSRAPSPRLPNKTI
SGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAPPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKG
NLPVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLKAEPA
SPAQDAQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQALPAPPA
PPGSQPFLQKKRHGRPGAGGGKLNPPPAPPARSPTTELSSKSQQATAWTPTQQPGGQLRNGSLHIIDDFE
SKFTFHSVEDFPPPDEYKPCQKIYPSKIPRSRTPGPWLQAEAVGQSSDDIKGRNSQVTQASCL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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