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Report for CCDS94036.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94036.1 Public Homo sapiens 6 FRMD1 24 110 108 CCDS HistoryNCBI Gene:79981Re-query CCDS DB by CCDS ID:94036.1Re-query CCDS DB by GeneID:79981See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94036.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336070.11 ENSP00000495639.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000336070.11Link to Ensembl Protein Viewer:ENSP00000495639.1Re-query CCDS DB by Nucleotide ID:ENST00000336070Re-query CCDS DB by Protein ID:ENSP00000495639
Original member Current member NCBI NM_001394681.1 NP_001381610.1 Accepted alive Link to Nucleotide Sequence:NM_001394681.1Link to Protein Sequence:NP_001381610.1Re-query CCDS DB by Nucleotide ID:NM_001394681Re-query CCDS DB by Protein ID:NP_001381610Link to BLAST:NP_001381610.1

Chromosomal Locations for CCDS 94036.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 168057097 168057339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 168059124 168059188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 168060761 168061057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 168061807 168061981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 168062671 168062739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 168062894 168062959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 168063601 168063756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 168064871 168065057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 168066755 168066831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 168067367 168067486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1455 nt):
ATGGTGACTGCTCTGATGAAGCCTTTTGTTTTGCTTTCAGACAATGAGTATATATTTATGGATTTGGAGC
AAAAGCTCAGCAAGTACTTCTCAAAAGATTGGAAGAAAGAAAGAAATGAAGGAAATGAGAAACCCAGAGC
CCCCTTCGTGGCCTTCCTCCGAGTGCAGCACTACGTGGAAAACGGAAGGGTCATAAGCGACCACAGGGCA
CGGCACCTGTACTACTGCCACTTGAAGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGGGAGGAAGCCT
ACTTCCTGCTGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAG
GTACTTCGAGCCACACTCCTACTTCCCACAGTGGATCATCACCAAGAGGGGGATTGACTACATCCTCCGG
CACATGCCTACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAAGGAGGCCATGCTGTGCTTCATCCAGG
AGGCCTGCCGGCTGGAGGACGTGCCCGTGCACTTCTTCAGGCTGCACAAGGATAAGAAGGAAGGTCGTCC
CACCGTGATCCTGGGACTGGCCCTCAGGGGAGTGCACATCTACCAGGAGGTGGACCGTGCTCCGCAGCTG
CTGTACGACCTCCCCTGGCCCCACGTTGGGAAGCTGGCATTTCTGGGAAAGAAGCTGGAGATCCAGCTGG
ATGGGCTGCCCGCAGCACAGAAGCTGGTTTACTACACGGGGTGCACCTGGCGGTCCAGGCACCTGCTGCA
CCTGCTGCGCGCCAGCCACCAGCTCCACCTCCGCGTGCGGCCCACTCTGCAACAGCTGCGGCAGCGGGAG
GAGGCAGAAGAGAAGCAGCACTACCGGGAGTCCTATATCAGCGATGAGCTGGAGCTGGACCTGGCCAGCA
GGAGCTTCCCGGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCACTGCCTCTCACGCCACTCCGCCGACAG
CCACGGCAGTTCCTACACGTCAGGCATCAAGGCCAACTCCTGGCTCAGGGAATCCAGAGAGATGTCTGTG
GACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCCTCCAGCCCCAGGACCAGCCGCAGCC
ACCCCAGCACACGTGGTGACAGCCAAGCCACTCGTCAGGAGCCCTGCACCCAGGTCAGGACCAGAGGCCA
GAGCGCCGAGGCCGTGCACCAGATCCAGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACAGCCATGGC
CTGGACGACATGCAGCTGCACCAGCTGGCCCTGCACCCAGCGCCCACCTCACTCAGCCATACCTTCCACC
GCGCCCTGGACTGCAGGCTGGCAGGCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAA
CTGTCTCGCCCTGGACCTGTTCGGAGAGGCTCCACCACAGGAGTTTGTGGTGTAG

Translation (484 aa):
MVTALMKPFVLLSDNEYIFMDLEQKLSKYFSKDWKKERNEGNEKPRAPFVAFLRVQHYVENGRVISDHRA
RHLYYCHLKERVLRSQCAHREEAYFLLAACALQADLGEHRESAHAGRYFEPHSYFPQWIITKRGIDYILR
HMPTLHRERQGLSPKEAMLCFIQEACRLEDVPVHFFRLHKDKKEGRPTVILGLALRGVHIYQEVDRAPQL
LYDLPWPHVGKLAFLGKKLEIQLDGLPAAQKLVYYTGCTWRSRHLLHLLRASHQLHLRVRPTLQQLRQRE
EAEEKQHYRESYISDELELDLASRSFPGSGVSSQHCPHCLSRHSADSHGSSYTSGIKANSWLRESREMSV
DVPLEVHGLHEKEPSSSPRTSRSHPSTRGDSQATRQEPCTQVRTRGQSAEAVHQIQEMTAGVSEEQHSHG
LDDMQLHQLALHPAPTSLSHTFHRALDCRLAGPCETRATLPSKRSSNCLALDLFGEAPPQEFVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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