NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS94014.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94014.1 Public Homo sapiens 6 AIG1 24 110 108 CCDS HistoryNCBI Gene:51390Re-query CCDS DB by CCDS ID:94014.1Re-query CCDS DB by GeneID:51390See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94014.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000275235.8 ENSP00000275235.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000275235.8Link to Ensembl Protein Viewer:ENSP00000275235.4Re-query CCDS DB by Nucleotide ID:ENST00000275235Re-query CCDS DB by Protein ID:ENSP00000275235
Original member Current member NCBI NM_001366347.1 NP_001353276.1 Accepted alive Link to Nucleotide Sequence:NM_001366347.1Link to Protein Sequence:NP_001353276.1Re-query CCDS DB by Nucleotide ID:NM_001366347Re-query CCDS DB by Protein ID:NP_001353276Link to BLAST:NP_001353276.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001353276.1 245 Q9NVV5-1 245 100% 0 0

Chromosomal Locations for CCDS 94014.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 143060926 143061066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 143136835 143136990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 143165082 143165183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 143284110 143284225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 143333282 143333445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 143334078 143334095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 143335051 143335091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (738 nt):
ATGGCGCTTGTCCCCTGCCAGGTGCTGCGGATGGCAATCCTGCTGTCTTACTGCTCTATCCTGTGTAACT
ACAAGGCCATCGAAATGCCCTCACACCAGACCTACGGAGGGAGCTGGAAATTCCTGACGTTCATTGATCT
GGTTATCCAGGCTGTCTTTTTTGGCATCTGTGTGCTGACTGATCTTTCCAGTCTTCTGACTCGAGGAAGT
GGGAACCAGGAGCAAGAGAGGCAGCTCAAGAAGCTCATCTCTCTCCGGGACTGGATGTTAGCTGTGTTGG
CCTTTCCTGTTGGGGTTTTTGTTGTAGCAGTGTTCTGGATCATTTATGCCTATGACAGAGAGATGATATA
CCCGAAGCTGCTGGATAATTTTATCCCAGGGTGGCTGAATCACGGAATGCACACGACGGTTCTGCCCTTT
ATATTAATCGAGATGAGGACATCGCACCATCAGTATCCCAGCAGGAGCAGCGGACTTACCGCCATATGTA
CCTTCTCTGTTGGCTATATATTATGGGTGTGCTGGGTGCATCATGTAACTGGCATGTGGGTGTACCCTTT
CCTGGAACACATTGGCCCAGGAGCCAGAATCATCTTCTTTGGGTCTACAACCATCTTAATGAACTTCCTG
TACCTGCTGGGAGAAGTTCTGAACAACTATATCTGGGATACACAGAAAAAGCCTCCATCTTGGCAAGATA
TGAAAATTAAGTTTATGTACCTAGGACCATCTAGTTAG

Translation (245 aa):
MALVPCQVLRMAILLSYCSILCNYKAIEMPSHQTYGGSWKFLTFIDLVIQAVFFGICVLTDLSSLLTRGS
GNQEQERQLKKLISLRDWMLAVLAFPVGVFVVAVFWIIYAYDREMIYPKLLDNFIPGWLNHGMHTTVLPF
ILIEMRTSHHQYPSRSSGLTAICTFSVGYILWVCWVHHVTGMWVYPFLEHIGPGARIIFFGSTTILMNFL
YLLGEVLNNYIWDTQKKPPSWQDMKIKFMYLGPSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH