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Report for CCDS93761.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93761.1 Public Homo sapiens 5 CCDC112 24 110 108 CCDS HistoryNCBI Gene:153733Re-query CCDS DB by CCDS ID:93761.1Re-query CCDS DB by GeneID:153733See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93761.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000506442.5 ENSP00000424876.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000506442.5Link to Ensembl Protein Viewer:ENSP00000424876.1Re-query CCDS DB by Nucleotide ID:ENST00000506442Re-query CCDS DB by Protein ID:ENSP00000424876
Original member Current member NCBI NM_001375897.1 NP_001362826.1 Accepted alive Link to Nucleotide Sequence:NM_001375897.1Link to Protein Sequence:NP_001362826.1Re-query CCDS DB by Nucleotide ID:NM_001375897Re-query CCDS DB by Protein ID:NP_001362826Link to BLAST:NP_001362826.1

Chromosomal Locations for CCDS 93761.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 115267876 115267918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 115268882 115269000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 115271213 115271626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 115275216 115275606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 115275994 115276069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 115276965 115277054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 115279647 115279758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1245 nt):
ATGGAAAAAGATAAACACAGTCATTTCTACAACCAAAAAAGTGACTTCAGAATTGAGCATAGTATGCTAG
AAGAATTGGAAAATAAATTGATTCACAGCAGGAAAACAGAAAGAGCAAAAATCCAGCAACAATTGGCCAA
AATACATAATAATGTAAAGAAACTTCAGCATCAATTAAAAGATGTGAAGCCTACACCTGATTTTGTTGAG
AAGCTCAGAGAAATGATGGAAGAAATTGAAAATGCAATTAACACTTTTAAAGAAGAGCAGAGGTTGATAT
ATGAAGAGCTAATTAAAGAAGAGAAGACAACTAATAATGAGTTGAGTGCCATATCAAGAAAAATTGACAC
ATGGGCTTTGGGTAATTCAGAAACAGAGAAAGCTTTCAGAGCAATCTCAAGCAAAGTTCCTGTAGACAAA
GTAACACCAAGTACTCTTCCAGAAGAGGTACTAGATTTTGAAAAATTCCTTCAGCAAACAGGAGGGCGAC
AAGGTGCCTGGGATGATTATGATCACCAGAACTTTGTAAAGGTGAGAAACAAACATAAAGGGAAGCCAAC
ATTTATGGAAGAAGTTCTAGAACACCTTCCTGGAAAAACACAAGATGAAGTTCAACAGCATGAAAAATGG
TATCAAAAGTTTCTGGCTCTAGAAGAAAGAAAAAAAGAGTCAATTCAGATTTGGAAAACTAAAAAGCAGC
AAAAAAGGGAGGAAATTTTCAAGTTAAAGGAAAAGGCAGACAACACACCTGTGCTTTTTCATAATAAACA
AGAGGATAATCAAAAGCAAAAAGAGGAACAAAGAAAGAAACAGAAATTGGCAGTTGAAGCTTGGAAGAAA
CAGAAAAGTATAGAAATGTCAATGAAATGTGCTTCCCAGTTAAAAGAAGAAGAAGAGAAAGAGAAAAAAC
ATCAGAAAGAACGCCAGCGCCAGTTTAAGTTAAAATTACTACTAGAAAGTTATACCCAGCAGAAGAAAGA
ACAGGAAGAATTTTTGAGGCTTGAAAAGGAGATAAGGGAAAAGGCAGAAAAGGCAGAAAAAAGGAAAAAT
GCTGCTGATGAAATTTCCAGATTTCAAGAAAGAGTTGAAAACAATGTTAGTAGAGATCCCTCTAGGCTTT
ACAAACCCACCAAAGGTTGGGAAGAACGAACCAAAAAGATAGGACCAACAGGCTCTGGGCCACTTCTACA
TATCCCACATAGGGCTATTCCAACCTGGAGACAAGGAATACAGAGAAGAGTATGA

Translation (414 aa):
MEKDKHSHFYNQKSDFRIEHSMLEELENKLIHSRKTERAKIQQQLAKIHNNVKKLQHQLKDVKPTPDFVE
KLREMMEEIENAINTFKEEQRLIYEELIKEEKTTNNELSAISRKIDTWALGNSETEKAFRAISSKVPVDK
VTPSTLPEEVLDFEKFLQQTGGRQGAWDDYDHQNFVKVRNKHKGKPTFMEEVLEHLPGKTQDEVQQHEKW
YQKFLALEERKKESIQIWKTKKQQKREEIFKLKEKADNTPVLFHNKQEDNQKQKEEQRKKQKLAVEAWKK
QKSIEMSMKCASQLKEEEEKEKKHQKERQRQFKLKLLLESYTQQKKEQEEFLRLEKEIREKAEKAEKRKN
AADEISRFQERVENNVSRDPSRLYKPTKGWEERTKKIGPTGSGPLLHIPHRAIPTWRQGIQRRV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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