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Report for CCDS93661.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93661.1 Public Homo sapiens 4 ETFDH 24 110 108 CCDS HistoryNCBI Gene:2110Re-query CCDS DB by CCDS ID:93661.1Re-query CCDS DB by GeneID:2110See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93661.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000684036.1 ENSP00000507276.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000684036.1Link to Ensembl Protein Viewer:ENSP00000507276.1Re-query CCDS DB by Nucleotide ID:ENST00000684036Re-query CCDS DB by Protein ID:ENSP00000507276
Original member Current member EBI ENST00000684627.1 ENSP00000507471.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000684627.1Link to Ensembl Protein Viewer:ENSP00000507471.1Re-query CCDS DB by Nucleotide ID:ENST00000684627Re-query CCDS DB by Protein ID:ENSP00000507471
Original member Current member EBI ENST00000683305.1 ENSP00000508043.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000683305.1Link to Ensembl Protein Viewer:ENSP00000508043.1Re-query CCDS DB by Nucleotide ID:ENST00000683305Re-query CCDS DB by Protein ID:ENSP00000508043
Original member Current member NCBI NM_001281738.1 NP_001268667.1 Accepted alive Link to Nucleotide Sequence:NM_001281738.1Link to Protein Sequence:NP_001268667.1Re-query CCDS DB by Nucleotide ID:NM_001281738Re-query CCDS DB by Protein ID:NP_001268667Link to BLAST:NP_001268667.1

Chromosomal Locations for CCDS 93661.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 158682203 158682424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158684592 158684673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158685101 158685219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158690348 158690425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158695497 158695643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158697559 158697699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158698987 158699130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158703423 158703591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158706189 158706371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158706629 158706850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 158708364 158708527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1671 nt):
ATGGAAAGGTTTGCAGAAGAAGCAGATGTTGTAATAGTTGGTGCAGGCCCTGCAGGGCTCTCTGCAGCTG
TTCGTCTAAAACAGTTGGCTGTGGCACATGAAAAGGACATCCGTGTGTGTCTAGTGGAGAAAGCTGCCCA
GATAGGAGCTCATACTCTCTCAGGGGCTTGCCTTGATCCAGGTGCTTTTAAAGAACTCTTCCCAGACTGG
AAAGAGAAGGGGGCTCCACTTAACACTCCTGTAACAGAAGACAGATTTGGAATTTTAACAGAGAAATACA
GAATTCCTGTGCCAATTCTTCCAGGGCTTCCAATGAATAATCATGGCAATTACATTGTACGCTTGGGACA
TTTAGTGAGCTGGATGGGCGAACAAGCAGAAGCCCTTGGTGTTGAAGTATACCCTGGTTATGCAGCTGCT
GAGGTCCTTTTTCATGATGATGGTAGTGTAAAAGGAATTGCCACTAACGATGTAGGGATACAAAAGGATG
GTGCACCAAAGGCAACATTTGAGAGAGGACTGGAACTACATGCTAAAGTCACAATTTTTGCAGAAGGTTG
CCATGGACATCTAGCCAAGCAACTATATAAGAAGTTTGATTTGAGAGCAAATTGTGAACCTCAAACCTAC
GGGATTGGACTGAAGGAGTTATGGGTTATTGATGAAAAGAACTGGAAACCTGGGAGAGTAGATCACACTG
TTGGTTGGCCCTTGGACAGACATACCTATGGAGGATCTTTCCTCTATCATTTGAATGAAGGTGAACCCCT
AGTAGCTCTTGGTCTTGTGGTTGGTCTAGACTATCAGAATCCATACCTGAGTCCATTTAGAGAGTTCCAA
AGGTGGAAACACCATCCTAGCATTCGGCCAACCTTGGAAGGTGGAAAAAGGATTGCATACGGAGCCAGAG
CTCTCAATGAAGGTGGCTTTCAGTCTATACCAAAACTCACCTTTCCTGGTGGTTTACTAATTGGTTGTAG
TCCTGGTTTTATGAATGTTCCCAAGATCAAAGGTACTCACACAGCAATGAAAAGTGGAATTTTAGCAGCA
GAATCTATTTTTAATCAACTAACTAGTGAAAATCTCCAATCAAAGACAATAGGACTCCATGTAACTGAAT
ATGAGGACAATTTGAAGAACTCATGGGTATGGAAAGAGCTATATTCTGTTAGAAATATAAGACCGTCCTG
CCACGGAGTACTGGGTGTATATGGAGGGATGATTTACACTGGAATCTTTTACTGGATATTGAGAGGAATG
GAGCCGTGGACTCTGAAACATAAAGGTTCTGACTTTGAACGGCTCAAGCCAGCCAAGGATTGCACACCTA
TTGAGTATCCAAAACCCGATGGACAGATCAGTTTTGACCTCTTGTCATCTGTGGCTCTGAGTGGTACTAA
TCATGAACATGACCAGCCGGCACACTTAACCTTAAGGGATGACAGTATACCTGTAAATAGAAATCTGTCG
ATATATGATGGGCCCGAGCAGCGATTCTGTCCTGCAGGAGTTTATGAATTTGTACCTGTGGAACAAGGTG
ATGGATTTCGGTTACAGATAAATGCTCAGAACTGTGTACATTGTAAAACATGTGATATTAAAGATCCAAG
TCAGAATATTAACTGGGTGGTACCTGAAGGTGGAGGAGGACCTGCTTACAATGGAATGTAA

Translation (556 aa):
MERFAEEADVVIVGAGPAGLSAAVRLKQLAVAHEKDIRVCLVEKAAQIGAHTLSGACLDPGAFKELFPDW
KEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYIVRLGHLVSWMGEQAEALGVEVYPGYAAA
EVLFHDDGSVKGIATNDVGIQKDGAPKATFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTY
GIGLKELWVIDEKNWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLVALGLVVGLDYQNPYLSPFREFQ
RWKHHPSIRPTLEGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGILAA
ESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHGVLGVYGGMIYTGIFYWILRGM
EPWTLKHKGSDFERLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLTLRDDSIPVNRNLS
IYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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