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Report for CCDS93644.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93644.1 Public Homo sapiens 4 OTUD4 24 110 108 CCDS HistoryNCBI Gene:54726Re-query CCDS DB by CCDS ID:93644.1Re-query CCDS DB by GeneID:54726See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93644.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000447906.8 ENSP00000395487.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000447906.8Link to Ensembl Protein Viewer:ENSP00000395487.2Re-query CCDS DB by Nucleotide ID:ENST00000447906Re-query CCDS DB by Protein ID:ENSP00000395487
Original member Current member NCBI NM_001366057.1 NP_001352986.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001366057.1Link to Protein Sequence:NP_001352986.1Re-query CCDS DB by Nucleotide ID:NM_001366057Re-query CCDS DB by Protein ID:NP_001352986Link to BLAST:NP_001352986.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001352986.1 1114 Q01804-1 1114 100% 0 0

Chromosomal Locations for CCDS 93644.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 145137430 145138650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145139951 145139991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145141379 145141639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145142196 145142334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145143365 145143445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145143946 145144001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145144311 145144434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145146267 145146429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145150513 145150699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145150802 145150905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145152541 145152635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145155411 145155475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145155569 145155686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145155936 145155996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145159503 145159635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145162640 145162721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145164154 145164226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145165151 145165197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145171670 145171720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145174661 145174744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 145179815 145179973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3345 nt):
ATGGAGGCTGCCGTCGGCGTCCCCGACGGCGGGGACCAGGGCGGCGCGGGGCCCCGCGAGGACGCGACGC
CCATGGACGCCTATCTGCGGAAACTGGGCTTGTATCGGAAACTGGTCGCCAAGGACGGGTCGTGCCTGTT
CCGGGCCGTGGCGGAGCAGGTATTGCACTCTCAGTCTCGCCATGTTGAAGTCAGAATGGCCTGTATTCAC
TATCTTCGAGAGAACAGAGAGAAATTTGAAGCGTTTATAGAAGGATCATTTGAAGAATATTTAAAGCGTT
TGGAAAATCCACAGGAATGGGTAGGACAAGTGGAAATAAGTGCCCTTTCTCTTATGTACAGGAAAGATTT
TATAATTTATCGGGAACCAAATGTTTCTCCTTCACAAGTAACAGAAAATAATTTTCCTGAAAAGGTGTTA
CTGTGTTTTTCAAATGGAAATCATTATGATATTGTGTATCCCATAAAGTATAAAGAAAGCTCTGCTATGT
GTCAGTCTCTCCTTTATGAATTGCTGTATGAGAAGGTATTTAAAACTGATGTTAGTAAAATTGTGATGGA
ACTAGACACGTTGGAAGTAGCTGATGAAGATAACAGTGAAATATCAGATTCAGAGGATGACAGTTGCAAG
AGTAAGACTGCTGCTGCTGCTGCTGATGTGAATGGATTTAAACCTTTGTCAGGCAATGAGCAGCTGAAGA
ACAATGGGAACTCTACTAGCCTGCCTTTGTCTAGAAAGGTTCTTAAGTCACTCAATCCTGCAGTCTATAG
AAATGTGGAATATGAAATTTGGCTGAAGTCTAAACAAGCTCAGCAAAAACGTGATTATTCCATTGCTGCT
GGCTTACAATATGAAGTTGGAGACAAATGTCAAGTTAGGTTGGATCACAATGGAAAATTTTTGAATGCAG
ATGTTCAAGGAATTCATTCTGAGAATGGACCAGTTTTGGTTGAAGAACTGGGAAAGAAGCACACATCAAA
GAACCTCAAGGCACCTCCCCCAGAAAGCTGGAACACAGTGTCAGGGAAGAAGATGAAAAAACCTTCCACT
TCTGGACAAAATTTCCATTCTGATGTGGATTACAGAGGGCCAAAGAATCCAAGCAAGCCAATAAAAGCCC
CATCAGCACTACCTCCTCGACTGCAGCATCCTTCAGGAGTAAGACAACATGCGTTCTCTAGTCATTCTTC
AGGGTCACAGTCTCAGAAATTCTCCAGTGAGCACAAAAATCTTAGCCGGACACCTTCACAGATCATAAGA
AAACCTGATCGTGAAAGAGTTGAGGATTTTGATCACACAAGTCGAGAATCTAACTATTTCGGCCTTTCCC
CAGAAGAGCGCAGAGAGAAGCAAGCTATAGAAGAATCCCGTTTACTCTATGAGATTCAGAACAGAGATGA
ACAGGCTTTCCCAGCCCTTTCCAGCTCATCAGTCAATCAGTCAGCTTCTCAGAGTAGCAATCCATGTGTC
CAGAGAAAATCATCACATGTAGGTGATAGAAAAGGAAGCAGGCGGAGAATGGATACAGAAGAACGAAAAG
ACAAAGACTCTATTCATGGACATAGTCAGTTGGATAAAAGACCCGAACCAAGCACATTGGAGAATATTAC
TGATGATAAATATGCAACAGTTTCATCACCATCAAAGTCAAAGAAGTTAGAGTGCCCTTCTCCTGCGGAA
CAAAAGCCAGCAGAACATGTGTCTTTGTCAAATCCAGCTCCCCTTCTAGTTTCTCCAGAGGTACATCTAA
CTCCTGCGGTGCCTTCTTTACCAGCCACTGTGCCAGCCTGGCCAAGTGAACCTACAACTTTTGGACCAAC
AGGTGTCCCTGCTCCAATTCCCGTTTTGTCAGTGACACAGACTTTGACCACTGGACCTGATTCAGCTGTA
TCCCAAGCTCATTTAACACCCTCTCCAGTTCCTGTGTCAATACAGGCAGTTAACCAGCCCTTGATGCCTT
TGCCTCAGACATTGAGCCTTTATCAAGACCCACTCTATCCTGGGTTTCCTTGTAATGAAAAGGGAGATCG
AGCCATTGTACCACCTTATTCACTGTGTCAGACTGGGGAGGACCTACCTAAAGATAAGAATATTCTTCGA
TTCTTCTTCAATCTTGGTGTGAAGGCATACAGTTGTCCTATGTGGGCCCCACATTCTTACCTGTACCCTC
TGCACCAGGCCTACCTGGCAGCCTGCAGGATGTACCCAAAGGTCCCTGTCCCTGTTTATCCTCATAATCC
CTGGTTCCAAGAGGCTCCTGCTGCTCAGAATGAAAGTGATTGTACCTGTACTGATGCCCACTTTCCTATG
CAGACTGAGGCCAGTGTTAATGGTCAAATGCCACAGCCAGAGATTGGACCGCCGACATTTTCTTCACCTC
TGGTTATCCCTCCATCTCAGGTGTCTGAAAGTCATGGACAATTGTCTTACCAGGCTGATCTTGAATCTGA
GACCCCTGGGCAGCTTCTGCATGCTGATTATGAAGAGTCACTAAGTGGCAAGAATATGTTCCCCCAGCCA
TCTTTTGGACCCAATCCATTCTTAGGCCCAGTTCCTATTGCACCTCCTTTCTTTCCTCATGTTTGGTATG
GGTACCCTTTTCAGGGATTCATAGAAAATCCAGTAATGAGGCAGAATATTGTCCTGCCCTCTGATGAAAA
AGGAGAATTGGATCTGTCTCTGGAAAATCTGGATCTGTCTAAAGATTGTGGTTCAGTTTCAACAGTAGAT
GAGTTTCCAGAAGCCAGGGGTGAACATGTACATTCTCTCCCTGAAGCAAGTGTGAGCAGTAAGCCGGACG
AAGGCCGGACAGAGCAATCTTCCCAGACACGAAAGGCAGATACGGCATTGGCTTCCATCCCTCCTGTAGC
AGAGGGAAAGGCTCATCCTCCCACTCAGATTCTAAACAGAGAGAGAGAAACTGTGCCTGTTGAACTTGAA
CCTAAAAGGACCATTCAAAGCCTGAAAGAAAAAACAGAAAAAGTAAAAGATCCTAAGACTGCTGCTGATG
TGGTCAGCCCTGGGGCCAACTCTGTTGATAGCAGAGTGCAAAGACCAAAAGAAGAGAGTTCAGAAGATGA
AAATGAAGTGTCTAATATTTTGAGAAGTGGTAGATCCAAGCAGTTCTATAATCAAACTTATGGAAGCAGG
AAGTACAAAAGTGATTGGGGCTATTCTGGTAGGGGTGGATATCAACATGTGAGAAGTGAGGAGTCCTGGA
AAGGACAGCCAAGCAGAAGTCGGGATGAAGGTTATCAGTACCATCGAAATGTCAGAGGGCGACCATTTAG
GGGAGATAGGAGGAGATCAGGGATGGGAGATGGCCATAGGGGACAGCACACTTGA

Translation (1114 aa):
MEAAVGVPDGGDQGGAGPREDATPMDAYLRKLGLYRKLVAKDGSCLFRAVAEQVLHSQSRHVEVRMACIH
YLRENREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMYRKDFIIYREPNVSPSQVTENNFPEKVL
LCFSNGNHYDIVYPIKYKESSAMCQSLLYELLYEKVFKTDVSKIVMELDTLEVADEDNSEISDSEDDSCK
SKTAAAAADVNGFKPLSGNEQLKNNGNSTSLPLSRKVLKSLNPAVYRNVEYEIWLKSKQAQQKRDYSIAA
GLQYEVGDKCQVRLDHNGKFLNADVQGIHSENGPVLVEELGKKHTSKNLKAPPPESWNTVSGKKMKKPST
SGQNFHSDVDYRGPKNPSKPIKAPSALPPRLQHPSGVRQHAFSSHSSGSQSQKFSSEHKNLSRTPSQIIR
KPDRERVEDFDHTSRESNYFGLSPEERREKQAIEESRLLYEIQNRDEQAFPALSSSSVNQSASQSSNPCV
QRKSSHVGDRKGSRRRMDTEERKDKDSIHGHSQLDKRPEPSTLENITDDKYATVSSPSKSKKLECPSPAE
QKPAEHVSLSNPAPLLVSPEVHLTPAVPSLPATVPAWPSEPTTFGPTGVPAPIPVLSVTQTLTTGPDSAV
SQAHLTPSPVPVSIQAVNQPLMPLPQTLSLYQDPLYPGFPCNEKGDRAIVPPYSLCQTGEDLPKDKNILR
FFFNLGVKAYSCPMWAPHSYLYPLHQAYLAACRMYPKVPVPVYPHNPWFQEAPAAQNESDCTCTDAHFPM
QTEASVNGQMPQPEIGPPTFSSPLVIPPSQVSESHGQLSYQADLESETPGQLLHADYEESLSGKNMFPQP
SFGPNPFLGPVPIAPPFFPHVWYGYPFQGFIENPVMRQNIVLPSDEKGELDLSLENLDLSKDCGSVSTVD
EFPEARGEHVHSLPEASVSSKPDEGRTEQSSQTRKADTALASIPPVAEGKAHPPTQILNRERETVPVELE
PKRTIQSLKEKTEKVKDPKTAADVVSPGANSVDSRVQRPKEESSEDENEVSNILRSGRSKQFYNQTYGSR
KYKSDWGYSGRGGYQHVRSEESWKGQPSRSRDEGYQYHRNVRGRPFRGDRRRSGMGDGHRGQHT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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