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Report for CCDS9350.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9350.1 Public Homo sapiens 13 STARD13 24 110 108 CCDS HistoryNCBI Gene:90627Re-query CCDS DB by CCDS ID:9350.1Re-query CCDS DB by GeneID:90627See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 9350.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000399365.7 ENSP00000382300.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399365.7Link to Ensembl Protein Viewer:ENSP00000382300.3Re-query CCDS DB by Nucleotide ID:ENST00000399365Re-query CCDS DB by Protein ID:ENSP00000382300
Original member Current member NCBI NM_052851.3 NP_443083.1 Accepted alive Link to Nucleotide Sequence:NM_052851.3Link to Protein Sequence:NP_443083.1Re-query CCDS DB by Nucleotide ID:NM_052851Re-query CCDS DB by Protein ID:NP_443083Link to BLAST:NP_443083.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443083.1 995 Q9Y3M8-3 995 100% 0 0

Chromosomal Locations for CCDS 9350.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 33105593 33105710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33106758 33106934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33109873 33110090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33110686 33110907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33111778 33111892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33112721 33112931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33118065 33118263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33126081 33126240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33127373 33127546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33128929 33130289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33142310 33142342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2988 nt):
ATGAAACTTGATGTGAACTTCCAAAGGAAAAAGGGTGACGACTCCGATGAGGAAGATCTTTGTATCAGCA
ACAAATGGACTTTCCAAAGAACCAGTCGCAGGTGGTCTCGTGTGGACGACCTCTACACGCTGCTCCCTCG
AGGAGACAGAAATGGGTCACCGGGAGGCACGGGGATGAGGAACACGACCAGCAGTGAGAGCGTCCTCACA
GACCTGAGCGAGCCTGAGGTCTGCTCCATTCACAGCGAAAGCAGTGGAGGCAGCGACAGTCGCAGCCAGC
CGGGCCAGTGCTGTACAGACAACCCGGTCATGCTGGATGCCCCACTCGTCAGCAGCAGCCTCCCACAGCC
CCCCAGAGATGTCCTCAACCACCCCTTCCACCCCAAGAATGAGAAGCCCACGAGGGCTAGGGCCAAATCA
TTTTTGAAACGCATGGAAACACTCCGAGGGAAGGGAGCCCACGGGAGGCATAAGGGGTCTGGGCGGACAG
GTGGCCTGGTGATCAGTGGGCCCATGTTGCAGCAGGAGCCAGAGTCCTTTAAGGCTATGCAGTGCATCCA
AATACCAAATGGAGATCTCCAGAATTCGCCGCCACCTGCCTGCAGAAAAGGGCTCCCATGCTCTGGCAAG
TCGAGTGGCGAGAGCAGCCCGTCGGAGCACAGCAGCAGCGGGGTGAGCACGCCCTGCCTGAAGGAACGCA
AGTGCCACGAGGCCAACAAGCGCGGGGGCATGTACTTGGAGGACCTAGATGTGCTGGCGGGGACAGCACT
GCCGGATGCAGGGGACCAAAGCCGTATGCATGAATTTCACTCCCAAGAGAATTTGGTGGTGCATATTCCC
AAGGATCACAAACCAGGAACATTCCCCAAGGCACTTTCTATTGAAAGCCTCTCTCCCACAGATAGTAGCA
ATGGGGTTAATTGGAGGACCGGTAGCATCTCCCTGGGCAGAGAGCAGGTCCCTGGTGCCAGGGAGCCCCG
GCTCATGGCGTCCTGCCACAGAGCCAGCCGAGTCAGTATCTATGACAATGTCCCTGGCTCCCATCTGTAT
GCCAGCACAGGAGATCTTTTGGACTTGGAGAAAGATGACCTTTTCCCTCACTTGGATGACATTCTGCAGC
ATGTCAATGGGCTCCAAGAGGTAGTCGATGACTGGTCCAAAGATGTCTTGCCTGAACTGCAAACTCATGA
TACATTGGTTGGGGAACCTGGCTTATCCACCTTTCCATCTCCTAATCAGATCACCTTAGATTTTGAAGGT
AACTCTGTCTCAGAAGGTCGGACGACACCCAGTGATGTGGAAAGAGATGTAACATCTCTTAATGAATCTG
AGCCTCCTGGGGTCAGAGACAGGAGGGATTCTGGTGTAGGGGCCTCTCTGACCAGGCCAAACAGGCGACT
CCGATGGAACAGTTTCCAGCTGTCGCACCAGCCCCGGCCGGCCCCAGCATCGCCCCACATCAGCAGCCAG
ACGGCCAGCCAGCTGAGCCTGCTCCAGCGCTTCTCACTGCTCCGCCTCACGGCCATCATGGAGAAGCACT
CCATGTCCAACAAGCACGGCTGGACATGGTCAGTTCCAAAGTTCATGAAGAGGATGAAAGTTCCCGACTA
CAAAGACAAGGCTGTCTTTGGCGTTCCTCTCATAGTCCACGTCCAAAGAACGGGACAGCCCCTGCCTCAA
AGTATTCAGCAAGCACTGAGATATCTACGCAGCAACTGCCTCGATCAGGTGGGTCTTTTTCGCAAATCAG
GAGTGAAGTCTCGAATCCATGCCCTTCGCCAAATGAATGAAAACTTCCCTGAGAACGTCAACTATGAAGA
CCAGTCTGCTTATGATGTGGCGGATATGGTGAAACAGTTCTTCCGGGACCTCCCTGAGCCTCTTTTCACC
AACAAGCTCAGTGAGACCTTTCTCCATATCTATCAGTATGTCTCCAAAGAGCAGCGGCTGCAGGCCGTGC
AGGCTGCCATCCTGCTACTGGCCGATGAGAACAGGGAGGTCCTGCAGACGCTCTTGTGTTTCCTGAACGA
CGTCGTCAACTTGGTGGAAGAGAATCAGATGACGCCCATGAACCTGGCAGTGTGTCTGGCCCCCTCCCTC
TTTCATCTTAATTTATTGAAGAAAGAAAGCTCTCCACGAGTCATACAGAAGAAATATGCCACTGGGAAGC
CAGATCAAAAGGACCTCAACGAGAATCTGGCAGCAGCTCAGGGGCTAGCGCACATGATCATGGAATGCGA
CAGACTTTTTGAGGTTCCACACGAGTTGGTGGCCCAGTCTCGTAACTCGTATGTGGAGGCTGAGATCCAC
GTGCCAACCCTGGAAGAATTGGGGACACAGCTGGAGGAGAGTGGGGCAACTTTCCACACTTACCTGAACC
ATCTCATCCAGGGCCTCCAGAAAGAAGCCAAGGAGAAGTTCAAAGGATGGGTCACGTGCTCCAGCACGGA
CAATACAGATCTTGCTTTCAAAAAGGTGGGCGACGGGAACCCGCTGAAGCTGTGGAAGGCTTCTGTGGAG
GTGGAAGCACCCCCCTCAGTGGTCCTGAACCGCGTGCTGAGAGAGCGCCACCTGTGGGACGAGGACTTTG
TGCAGTGGAAGGTTGTGGAAACTCTAGACAGGCAAACAGAGATCTACCAGTATGTGCTGAACAGCATGGC
TCCCCATCCTTCCAGAGACTTTGTGGTTCTCAGGACCTGGAAAACTGATTTGCCCAAAGGAATGTGTACC
CTGGTGTCCCTCTCCGTGGAGCATGAGGAAGCCCAGCTCCTGGGTGGTGTGCGAGCAGTGGTGATGGACT
CGCAGTACTTGATAGAACCGTGTGGCTCTGGCAAGTCAAGACTGACTCACATCTGCAGGATAGACCTGAA
AGGTCACTCCCCAGAATGGTACAGCAAAGGCTTTGGACATCTGTGTGCAGCAGAAGTTGCCAGGATTAGA
AACTCTTTCCAGCCCCTCATTGCTGAGGGCCCAGAAACTAAAATCTGA

Translation (995 aa):
MKLDVNFQRKKGDDSDEEDLCISNKWTFQRTSRRWSRVDDLYTLLPRGDRNGSPGGTGMRNTTSSESVLT
DLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVMLDAPLVSSSLPQPPRDVLNHPFHPKNEKPTRARAKS
FLKRMETLRGKGAHGRHKGSGRTGGLVISGPMLQQEPESFKAMQCIQIPNGDLQNSPPPACRKGLPCSGK
SSGESSPSEHSSSGVSTPCLKERKCHEANKRGGMYLEDLDVLAGTALPDAGDQSRMHEFHSQENLVVHIP
KDHKPGTFPKALSIESLSPTDSSNGVNWRTGSISLGREQVPGAREPRLMASCHRASRVSIYDNVPGSHLY
ASTGDLLDLEKDDLFPHLDDILQHVNGLQEVVDDWSKDVLPELQTHDTLVGEPGLSTFPSPNQITLDFEG
NSVSEGRTTPSDVERDVTSLNESEPPGVRDRRDSGVGASLTRPNRRLRWNSFQLSHQPRPAPASPHISSQ
TASQLSLLQRFSLLRLTAIMEKHSMSNKHGWTWSVPKFMKRMKVPDYKDKAVFGVPLIVHVQRTGQPLPQ
SIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNENFPENVNYEDQSAYDVADMVKQFFRDLPEPLFT
NKLSETFLHIYQYVSKEQRLQAVQAAILLLADENREVLQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSL
FHLNLLKKESSPRVIQKKYATGKPDQKDLNENLAAAQGLAHMIMECDRLFEVPHELVAQSRNSYVEAEIH
VPTLEELGTQLEESGATFHTYLNHLIQGLQKEAKEKFKGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVE
VEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDRQTEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCT
LVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSRLTHICRIDLKGHSPEWYSKGFGHLCAAEVARIR
NSFQPLIAEGPETKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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