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Report for CCDS93481.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93481.1 Public Homo sapiens 4 CC2D2A 24 110 108 CCDS HistoryNCBI Gene:57545Re-query CCDS DB by CCDS ID:93481.1Re-query CCDS DB by GeneID:57545See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93481.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000506643.5 ENSP00000422931.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000506643.5Link to Ensembl Protein Viewer:ENSP00000422931.2Re-query CCDS DB by Nucleotide ID:ENST00000506643Re-query CCDS DB by Protein ID:ENSP00000422931
Original member Current member NCBI NM_001378617.1 NP_001365546.1 Accepted alive Link to Nucleotide Sequence:NM_001378617.1Link to Protein Sequence:NP_001365546.1Re-query CCDS DB by Nucleotide ID:NM_001378617Re-query CCDS DB by Protein ID:NP_001365546Link to BLAST:NP_001365546.1

Chromosomal Locations for CCDS 93481.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 15480728 15480827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15502429 15502517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15502822 15502923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15510139 15510240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15511247 15511423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15514707 15514869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15515868 15516004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15516625 15516756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15527447 15527656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15528620 15528726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15533193 15533333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15536920 15537076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15537899 15538137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15540837 15541014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15550824 15550980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15553158 15553305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15555072 15555210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15557304 15557507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15559165 15559257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15560531 15560622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15563355 15563522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15567377 15567482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15567677 15567786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15569293 15569389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15570398 15570496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15574150 15574326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15579968 15580171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15586157 15586246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15587816 15587929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15589545 15589679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15596085 15596207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15597407 15597465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15599529 15599706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15601237 15601425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4716 nt):
ATGGTGTCCGAAAAATCCCACCTTGGCAACCCCCAGGAGCCTGTGCAGGAGGAGCCCAAGACCCGCCTCC
TG
AGTATGACAGTCCGGAGAGGCCCACGGAGCTTACCTCCAATTCCTTCAACTTCCAGAACAGGCTTTGC
A
GAATTTTCCATGAGGGGACGCATGAGGGAGAAATTGCAAGCAGCGAGGTCCAAAGCAGAAAGTGCATTG
CTG
CAGGAAATCCCCACTCCTCGGCCCAGACGCTTACGAAGTCCCAGTAAGAAAGAATTGGAGACTGAAT
TT
GGCACAGAGCCAGGGAAAGAGGTAGAAAGGACTCAACAAGAAGTTGACTCCCAAAGTTACTCAAGAGT
C
AAGTTCCATGATTCTGCACGAAAAATCAAGCCTAAACCCCAGGTTCCACCTGGCTTCCCTTCTGCAGAA
GAG
GCCTATAACTTCTTTACTTTCAACTTTGATCCCGAACCAGAAGGATCAGAGGAAAAACCAAAAGCAA
GA
CATAGAGCGGGAACTAATCAAGAGGAGGAGGAAGGGGAAGAAGAAGAACCACCTGCACAAGGAGGAGG
A
AAGGAAATGGATGAGGAAGAACTGCTTAATGGTGATGATGCCGAGGACTTCCTATTGGGCTTAGATCAC
GTG
GCTGACGATTTTGTAGCAGTCAGACCTGCAGATTATGAAAGCATCCATGATCGGCTGCAGATGGAAA
GA
GAAATGCTCTTCATACCCAGTAGGCAGACAGTCCCTACATATAAAAAGCTTCCTGAGAATGTACAGCC
C
AGGTTCCTGGAAGATGAAGGCCTTTACACCGGGGTAAGACCAGAGGTGGCACGCACCAATCAGAACATC
ATG
GAGAACAGATTGCTGATGCAGGACCCCGAAAGAAGATGGTTTGGAGATGACGGCAGGATCCTAGCTC
TG
CCAAACCCCATCAAGCCATTTCCTTCAAGGCCGCCAGTACTAACACAGGAGCAGAGCATTAAGGCAGA
G
CTTGAAACACTGTATAAAAAGGCTGTAAAATACGTTCACAGTAGTCAGCATGTGATCAGATCTGGAGAC
CCT
CCTGGAAATTTCCAACTGGACATTGATATTTCAGGGTTAATCTTCACTCATCATCCCTGTTTTAGCC
GA
GAGCATGTTTTGGCAGCCAAGCTGGCCCAGTTATATGACCAGTACCTTGCAAGACACCAGAGAAACAA
G
GCGAAATTTCTTACTGATAAGCTCCAAGCTTTAAGAAATGCTGTTCAGACTGGCCTTGATCCAGAAAAA
CCT
CATCAGTCTCTCGATACCATCCAAAAAACCATCAATGAGTATAAATCTGAAATTCGACAAACAAGAA
AA
TTCCGTGATGCTGAACAAGAAAAAGATAGAACATTGCTTAAGACTATCATAAAAGTTTGGAAAGAGAT
G
AAATCCCTTCGAGAGTTCCAGAGATTTACAAATACTCCCTTGAAACTTGTTTTGAGAAAGGAAAAAGCT
GAC
CAGAAAGCAGATGAAGAAGCATATGAAGCAGAAATTCAAGCTGAAATAAGTGAACTGTTAGAAGAGC
AC
ACGGAGGAGTACGCACAGAAGATGGAAGAATACAGAACGTCGTTACAACAGTGGAAGGCCTGGAGGAA
A
GTGCAAAGGGCCAAGAAGAAGAAAAGGAAACAAGCAGCAGAAGAACATCCCGGTGATGAGATTGCAGAG
CCG
TATCCCGAGGAGGACCTTGTGAAGCCCAGCCCTCCAGAGCCCACTGATCGGGCAGTGATAGAGCAGG
AG
GTGAGGGAGAGAGCAGCCCAGAGCAGGAGGAGGCCTTGGGAGCCCACGCTGGTCCCGGAGCTAAGCCT
G
GCAGGAAGCGTAACACCCAATGACCAGTGCCCCAGAGCGGAGGTCTCGAGAAGGGAGGATGTAAAGAAG
CGC
TCAGTGTACTTAAAAGTGCTGTTCAACAACAAGGAGGTGTCCAGGACAGTCAGTCGGCCACTAGGAG
CA
GACTTCCGAGTTCACTTTGGGCAGATTTTCAATTTGCAAATAGTCAACTGGCCGGAGAGTTTAACACT
T
CAGGTCTATGAAACTGTCGGACACAGTAGTCCCACCTTGCTAGCAGAAGTGTTTCTGCCTATTCCTGAG
ACT
ACTGTTGTCACTGGAAGGGCTCCTACTGAAGAAGTGGAGTTTAGCAGTAATCAGCATGTGACACTGG
AC
CACGAGGGAGTTGGAAGTGGAGTGCCCTTCTCATTTGAAGCTGATGGCAGTAACCAGCTGACTCTGAT
G
ACCTCAGGGAAAGTGTCTCATAGTGTGGCATGGGCCATTGGAGAAAACGGGATACCTTTAATTCCTCCA
TTG
TCACAGCAGAACATCGGATTTCGGAGTGCTTTGAAGAAAGCAGATGCCATCTCATCTATTGGCACAT
CA
GGACTGACAGACATGAAAAAATTGGCCAAGTGGGCAGCAGAGTCCAAGCTCGACCCAAATGACCCCAA
C
AATGCCCCTTTGATGCAGCTTATCTCGGTTGCTACCAGTGGTGAATCCTATGTCCCTGATTTCTTTAGA
CTG
GAGCAGCTGCAACAGGAGTTTAACTTTGTTTCAGATCAAGAATTAAATAGATCCAAACGATTTAGGC
TT
CTTCATCTTAGAAGCCAAGAGGTGCCAGAATTCCGAAATTATAAGCAAGTTCCAGTCTATGACCGAGA
A
ATTATGGAAAAGGTATTCCAGGACTATGAGAAACGGTTACGAGACAGAAATGTAATAGAAACCAAGGAA
CAC
ATAGACACCCATAGGGCCATAGTAGCCAAGTACCTCCAGCAGGTTAGAGAATCAGTGATAAATCGTT
TC
TTAATTGCAAAACAATATTTTCTTCTTGCTGATATGATAGTAGAAGAAGAAGTTCCCAATATCAGCAT
T
TTGGGCCTAAGCCTTTTCAAGCTGGCAGAACAAAAGCGACCACTGCGGCCAAGGAGAAAAGGTCGGAAG
AAG
GTGACAGCCCAAAACCTGTCTGATGGAGACATAAAGCTGCTGGTGAACATTGTGCGAGCTTACGACA
TT
CCAGTGAGGAAGCCGGCAGTGAGCAAATTCCAGCAGCCGTCGAGGTCTTCAAGGATGTTCAGTGAAAA
G
CATGCTGCTTCCCCAAGCACGTACAGCCCAACCCACAATGCTGACTACCCCCTCGGCCAGGTTTTAGTA
CGT
CCCTTTGTAGAAGTCTCTTTTCAACGAACAGTTTGCCATACGACTACGGCTGAAGGACCAAACCCTA
GC
TGGAATGAAGAACTAGAACTTCCATTTAGGGCTCCTAATGGAGATTATAGCACAGCCAGTCTGCAGTC
A
GTGAAAGATGTTGTGTTCATTAACATTTTTGATGAAGTACTGCATGATGTCTTAGAGGATGACCGTGAA
AGA
GGAAGTGGAATCCATACTCGTATTGAGAGACACTGGCTGGGATGTGTGAAAATGCCATTTAGCACAA
TA
TATTTCCAAGCAAGGATTGATGGAACATTTAAAATAGATATTCCCCCAGTTCTTCTGGGCTACAGTAA
G
GAGCGAAATATGATTCTTGAGCGGGGTTTTGATTCTGTCCGAAGCTTAAGTGAAGGCTCCTACATTACC
CTC
TTTATTACCATTGAGCCCCAGCTGGTTCCTGGAGAGTCCATTCGAGAAAAGTTTGAGTCTCAGGAAG
AT
GAGAAATTACTTCAAGCAACTGAGAAGTTTCAAGCTGAATGTGCCTTAAAGTTTCCAAATCGTCAGTG
C
CTTACAACAGTAATTGATATAAGCGGAAAAACTGTTTTTATCACACGTTATCTCAAACCTTTAAACCCT
CCT
CAGGAGCTCCTTAATGTCTACCCCAATAATCTACAGGCAACTGCAGAACTGGTGGCTCGATATGTGT
CC
TTGATTCCCTTCTTGCCTGACACTGTCTCATTTGGTGGTATCTGTGACCTCTGGAGCACATCTGATCA
A
TTTCTTGATCTCCTGGCAGGGGATGAAGAAGAACATGCAGTACTATTGTGTAATTACTTTCTGTCTCTG
GGT
AAGAAGGCCTGGCTGTTGATGGGCAATGCTATTCCTGAGGGTCCAACTGCCTATGTGCTAACTTGGG
AG
CAAGGTCGTTATTTAATATGGAATCCCTGCAGTGGACATTTTTATGGACAATTTGATACATTCTGTCC
C
TTGAAAAATGTGGGCTGTTTAATAGGTCCTGACAATATTTGGTTTAATATTCAACGATATGAATCTCCA
CTA
AGGATAAATTTTGATGTCACCAGGCCCAAGCTATGGAAATCTTTCTTTTCAAGAAGCCTTCCATATC
CT
GGCCTTTCCAGTGTTCAGCCTGAAGAGCTAATTTACCAGCGCTCAGACAAAGCAGCTGCAGCTGAGCT
A
CAAGACAGGATTGAAAAAATACTAAAAGAAAAAATCATGGACTGGAGGCCACGCCATCTGACTCGGTGG
AAT
AGGTATTGTACCTCTACTCTGCGTCACTTCTTGCCTCTGTTAGAAAAAAGTCAAGGAGAAGATGTAG
AA
GATGACCACAGAGCAGAACTGCTAAAACAGCTGGGAGACTACAGGTTCTCTGGATTTCCTCTTCACAT
G
CCTTATTCTGAAGTGAAGCCTTTAATTGACGCTGTGTATAGTACTGGAGTACATAATATTGATGTTCCT
AAT
GTTGAATTTGCTTTAGCTGTATACATACACCCATACCCCAAAAATGTTTTGTCTGTTTGGATCTATG
TT
GCCTCTCTTATACGCAACAGGTAA


Translation (1571 aa):
MVSEKSHLGNPQEPVQEEPKTRLLSMTVRRGPRSLPPIPSTSRTGFAEFSMRGRMREKLQAARSKAESAL
L
QEIPTPRPRRLRSPSKKELETEFGTE
PGKEVERTQQEVDSQSYSRVKFHDSARKIKPKPQVPPGFPSAE
E
AYNFFTFNFDPEPEGSEEKPKARHRAGTNQEEEEGEEEEPPAQGGGKEM
DEEELLNGDDAEDFLLGLDH
V
ADDFVAVRPADYESIHDRLQMEREMLFIPSRQT
VPTYKKLPENVQPRFLEDEGLYTGVRPEVARTNQNI
M
ENRLLMQDP
ERRWFGDDGRILALPNPIKPFPSRPPVLTQEQSIKAELETLYKKAVKYVHSSQHVIRSGD
P
PGNFQLDIDISGLIFTHHPCFSREHVLAAKLAQLYDQYLARHQRNKAKFLTDK
LQALRNAVQTGLDPEK
P
HQSLDTIQKTINEYKSEI
RQTRKFRDAEQEKDRTLLKTIIKVWKEMKSLREFQRFTNTPLKLVLRKEKA
D
QKADEEAYEAEIQAEISELLEEHTEEYAQKMEEYRTSLQQWKAWRKVQ
RAKKKKRKQAAEEHPGDEIAE
P
YPEEDLVKPSPPEPTDRAVIEQEVRERAAQSRRRPWEPTLVPELSLAGSVTPNDQCP
RAEVSRREDVKK
R
SVYLKVLFNNKEVSRTVSRPLGADFRVHFGQIFNLQIVNWPESLTLQ
VYETVGHSSPTLLAEVFLPIPE
T
TVVTGRAPTEEVEFSSNQHVTLDHEGVGS
GVPFSFEADGSNQLTLMTSGKVSHSVAWAIGENGIPLIPP
L
SQQNIGFR
SALKKADAISSIGTSGLTDMKKLAKWAAESKLDPNDPNNAPLMQLISVATSGESYVPDFFR
L
EQLQQEFNFVSDQELNRSKRFRLLHLRSQEVPEFRNYKQVPVYDREIMEKVFQ
DYEKRLRDRNVIETKE
H
IDTHRAIVAKYLQQ
VRESVINRFLIAKQYFLLADMIVEEEVPNISILGLSLFKLAEQKRPLRPRRKGRK
K
VTAQNLSDGDIKLLVNIVRAYDIPVRKPAV
SKFQQPSRSSRMFSEKHAASPSTYSPTHNADYPLGQVLV
R
PFVEVSFQRTVCHTTTAEGPNPSWNEELELPF
RAPNGDYSTASLQSVKDVVFINIFDEVLHDVLEDDRE
R
GSGIHTRIERHWLGCVKMPFSTIYFQAR
IDGTFKIDIPPVLLGYSKERNMILERGFDSVRSLSEGSYIT
L
FITIEPQLVPGESIREK
FESQEDEKLLQATEKFQAECALKFPNRQCLTTVIDISGKTVFITRYLKPLNP
P
QELLNVYPNNLQATA
ELVARYVSLIPFLPDTVSFGGICDLWSTSDQFLDLLAGDEEEHAVLLCNYFLSL
G
KKAWLLMGNAIPE
GPTAYVLTWEQGRYLIWNPCSGHFYGQFDTFCPLKNVGCLIGPDNIWFNIQRYESP
L
RINFDVTRPKLWKSFFSRSLPYPGLSSVQ
PEELIYQRSDKAAAAELQDRIEKILKEKIMDWRPRHLTRW
N
RYCTSTLRHFLPLLEKSQGEDVEDDHRAELLKQLGDYR
FSGFPLHMPYSEVKPLIDAVYSTGVHNIDVP
N
VEFALAVYIHPYPKNVLSVWIYVASLIRNR




Links Key
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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