NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS93479.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93479.1 Public Homo sapiens 4 CPEB2 24 110 108 CCDS HistoryNCBI Gene:132864Re-query CCDS DB by CCDS ID:93479.1Re-query CCDS DB by GeneID:132864See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93479.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000382395.8 ENSP00000371832.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000382395.8Link to Ensembl Protein Viewer:ENSP00000371832.4Re-query CCDS DB by Nucleotide ID:ENST00000382395Re-query CCDS DB by Protein ID:ENSP00000371832
Original member Current member NCBI NM_001177383.2 NP_001170854.1 Accepted alive Link to Nucleotide Sequence:NM_001177383.2Link to Protein Sequence:NP_001170854.1Re-query CCDS DB by Nucleotide ID:NM_001177383Re-query CCDS DB by Protein ID:NP_001170854Link to BLAST:NP_001170854.1

Chromosomal Locations for CCDS 93479.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 15002674 15004335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15007305 15007586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15017188 15017278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15033161 15033211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15040464 15040487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15052414 15052584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15054128 15054217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15058421 15058539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15059187 15059301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15062079 15062260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15066153 15066380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3015 nt):
ATGAGGGATTTCGGGTTTGGGGTGCTGCAGACCGCCCCGCTCCGAAGTAGCAGTCCTGGGCCCCTGTTCT
GCGGCGAGGCGTATGGTCCTTACGCCGTGGGGTCCGTCAACCCGCTGCCCTCCGCCACGCCCTTCGGCCC
ACTGTCGCCACCACCGTTGCCTGTCACCGGCTTCTTAGAGGCCGCCTCCCCCTTCTCCGTCCCCCTCGGC
GGCGGCGCGGGCAGCCCGGCCGCCGCCGCTTCCTCTTCCTCCCCGTTCCTGGCGCATCAGCAGACCATGC
AGGATGAGCTGCTTCTGGGGCTGACACAGCAGCCGGCGCGGCCGCTTTCGGGGGCGGCGGCCACGGAGAA
ACTCCCCGACCACCACCCCGGCGGCGGCACGATCGCGGGTGTGACCCACCTCCTCCCCTCCCAGGACTTC
AAACCGAGTCTGCACCACCCCTCCTCCTCCTCCGCCTCCTCCTGCTGCTGCTGCCGCACCTCCTCCCCGC
AGGACTTCAGTAAGCGGCAGCAGCAGCAGCTGAGCAGCCAGAAGAGGAAAGAGTTCAGCCCTCCCCACCT
TCCCCACCCTCCGGACTCGAAGCCGCCGCCGCCGCCTCCGCCGCTCCACTGCCCCGGTCGGTTCAGCCCG
CCGCCGCCGCCAGCCGGCCCGCTCCTCCAGCCGGCGCAGCTCGCTCAGCGCCAGCAGCAACAGCCGCCGC
AGCAGTTCAGCCTCCTGCATCAGCAGCACCTCTCGCCGCAGGACTTCGCCCCGCGGCAGCGTCCGGCAGA
CCTGCCCCCGCTCCCGCAGCTCCCTCCCTCGCCGCCTGCAGCCCCGCGGCGCCGCCACGGAGGCGCGGGC
AGCCCTCGCAAGACCCCAGCCGCGGGCGAGGGCAGCGCCGCCGAGTCCCCCAATGCGGGCTTGGCCTCCT
CGACGCCGGTGAACCCCGCGCCGGGCTCCATGGAGTCCCCCAACCACCCTCTGCTCAACAGTCCCAGTAA
CCTCCTGCCCGGAGGTGCGCTTGGCGCGGGCGCCTTCAGCAGCCTGCAGAGCCCGGACCTTCCACACCCG
GGCGGCGGCGGCGGCGGCGGGGGCGGGGGGCCCCCAGGAGGCGGAGGGGGAGGCGGCTCCGCGTCGCCGC
CGCCGCTGCCCGGCTTCGGCACCCCCTGGTCGGTGCAGACCGCGTCGCCGCCACCCCAGCCCCAGCAGCC
GCCGCCGACCCAGCCGCAGCAGCAGCCGCCGCCACCCCAGCAGCCGCCCCAGCCGCAGCCGCAGCCGCCC
GGCTCGTCTGCCACCACCCCGGGCGGCGGCAGCGGCGGCTCGCTCAGCGCCATGCCGCCGCCCAGCCCCG
ACTCAGAGAACGGCTTCTACCCCGGGCTGCCGTCGTCCATGAACCCGGCCTTCTTCCCTAGCTTCTCGCC
CGTGTCGCCGCACGGCTGCACTGGGCTCAGCGTTCCGACGAGCGGCGGCGGCGGCGGCGGCTTCGGCGGC
CCCTTCTCGGCTACCGCTGTGCCCCCTCCGCCGCCGCCCGCCATGAATATACCTCAACAGCAGCCCCCGC
CGCCCGCGGCGCCGCAGCAGCCGCAGAGCCGGAGGTCGCCCGTCAGCCCGCAGCTCCAGCAGCAGCACCA
GGCGGCGGCCGCCGCCTTCCTGCAGCAGAGGAACTCCTATAACCACCACCAGCCTCTTCTGAAACAGTCT
CCCTGGAGCAACCATCAGAGCAGTGGCTGGGGCACTGGAAGTATGTCCTGGGGAGCAATGCATGGCAGAG
ATCATCGTAGAACCGGAAACATGGGAATCCCAGGAACTATGAATCAGATATCTCCATTGAAGAAACCGTT
TTCTGGTAATGTCATAGCACCACCGAAATTTACTCGCTCAACTCCATCACTGACTCCAAAATCTTGGATT
GAAGATAATGTGTTCAGAACAGACAACAATAGTAATACACTCTTACCCTTACAGGATCGAAGTAGAATGT
ATGACAGTTTGAATATGCACTCTTTGGAAAATTCCCTTATCGATATTATGAGAGCAGAGCATGATCCTCT
TAAGGGTCGATTGAGCTATCCACATCCAGGAACTGACAATCTGTTGATGTTAAATGCAAGGAGTTATGGG
CGAAGACGAGGTCGTTCTTCCCTCTTTCCAATAGATGATGGCTTGCTTGATGATGGTCACAGTGATCAAG
TTGGAGTTTTAAATTCACCCACCTGTTATTCAGCTCACCAAAATGGAGAGCGAATAGAACGCTTCTCTCG
AAAAGTTTTTGTTGGTGGTCTTCCTCCAGATATTGATGAAGATGAAATAACTGCTAGCTTCAGAAGATTT
GGGCCTTTGGTAGTAGATTGGCCTCATAAAGCAGAAAGCAAGTCCTATTTTCCACCAAAAGGCTATGCAT
TTCTTCTCTTTCAAGAAGAGAGCTCAGTTCAGGCACTCATTGATGCTTGTATTGAAGAAGATGGAAAACT
CTATCTGTGTGTTTCTAGCCCTACTATCAAGGACAAACCAGTTCAAATACGTCCTTGGAATTTAAGTGAT
AGTGATTTTGTAATGGATGGTTCTCAGCCTTTGGATCCCCGAAAAACAATTTTTGTTGGAGGTGTTCCTA
GGCCATTAAGGGCTGTGGAACTTGCTATGATCATGGACCGGCTGTATGGTGGAGTTTGTTATGCAGGAAT
TGATACAGATCCTGAGCTAAAATACCCAAAAGGTGCTGGGCGAGTTGCTTTCTCCAATCAGCAGAGCTAT
ATTGCTGCCATTAGTGCTCGGTTTGTTCAGCTTCAGCATGGTGATATTGATAAACGTGTGGAGGTAAAGC
CATATGTGCTAGATGACCAGATGTGTGATGAATGCCAGGGCGCACGCTGTGGTGGAAAATTTGCTCCCTT
TTTTTGTGCCAATGTCACTTGCCTGCAGTATTACTGTGAGTTTTGTTGGGCAAATATCCACTCTCGTGCT
GGACGTGAGTTCCATAAGCCATTGGTAAAGGAAGGTGCTGATCGCCCACGTCAGATCCACTTCCGCTGGA
ACTAA

Translation (1004 aa):
MRDFGFGVLQTAPLRSSSPGPLFCGEAYGPYAVGSVNPLPSATPFGPLSPPPLPVTGFLEAASPFSVPLG
GGAGSPAAAASSSSPFLAHQQTMQDELLLGLTQQPARPLSGAAATEKLPDHHPGGGTIAGVTHLLPSQDF
KPSLHHPSSSSASSCCCCRTSSPQDFSKRQQQQLSSQKRKEFSPPHLPHPPDSKPPPPPPPLHCPGRFSP
PPPPAGPLLQPAQLAQRQQQQPPQQFSLLHQQHLSPQDFAPRQRPADLPPLPQLPPSPPAAPRRRHGGAG
SPRKTPAAGEGSAAESPNAGLASSTPVNPAPGSMESPNHPLLNSPSNLLPGGALGAGAFSSLQSPDLPHP
GGGGGGGGGGPPGGGGGGGSASPPPLPGFGTPWSVQTASPPPQPQQPPPTQPQQQPPPPQQPPQPQPQPP
GSSATTPGGGSGGSLSAMPPPSPDSENGFYPGLPSSMNPAFFPSFSPVSPHGCTGLSVPTSGGGGGGFGG
PFSATAVPPPPPPAMNIPQQQPPPPAAPQQPQSRRSPVSPQLQQQHQAAAAAFLQQRNSYNHHQPLLKQS
PWSNHQSSGWGTGSMSWGAMHGRDHRRTGNMGIPGTMNQISPLKKPFSGNVIAPPKFTRSTPSLTPKSWI
EDNVFRTDNNSNTLLPLQDRSRMYDSLNMHSLENSLIDIMRAEHDPLKGRLSYPHPGTDNLLMLNARSYG
RRRGRSSLFPIDDGLLDDGHSDQVGVLNSPTCYSAHQNGERIERFSRKVFVGGLPPDIDEDEITASFRRF
GPLVVDWPHKAESKSYFPPKGYAFLLFQEESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSD
SDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSY
IAAISARFVQLQHGDIDKRVEVKPYVLDDQMCDECQGARCGGKFAPFFCANVTCLQYYCEFCWANIHSRA
GREFHKPLVKEGADRPRQIHFRWN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH