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Report for CCDS93392.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93392.1 Public Homo sapiens 3 CEP63 24 110 108 CCDS HistoryNCBI Gene:80254Re-query CCDS DB by CCDS ID:93392.1Re-query CCDS DB by GeneID:80254See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93392.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000684492.1 ENSP00000507256.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000684492.1Link to Ensembl Protein Viewer:ENSP00000507256.1Re-query CCDS DB by Nucleotide ID:ENST00000684492Re-query CCDS DB by Protein ID:ENSP00000507256
Original member Current member EBI ENST00000682822.1 ENSP00000507596.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682822.1Link to Ensembl Protein Viewer:ENSP00000507596.1Re-query CCDS DB by Nucleotide ID:ENST00000682822Re-query CCDS DB by Protein ID:ENSP00000507596
Original member Current member EBI ENST00000682685.1 ENSP00000507957.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682685.1Link to Ensembl Protein Viewer:ENSP00000507957.1Re-query CCDS DB by Nucleotide ID:ENST00000682685Re-query CCDS DB by Protein ID:ENSP00000507957
Original member Current member EBI ENST00000682593.1 ENSP00000508324.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682593.1Link to Ensembl Protein Viewer:ENSP00000508324.1Re-query CCDS DB by Nucleotide ID:ENST00000682593Re-query CCDS DB by Protein ID:ENSP00000508324
Original member Current member NCBI NM_001353125.2 NP_001340054.1 Accepted alive Link to Nucleotide Sequence:NM_001353125.2Link to Protein Sequence:NP_001340054.1Re-query CCDS DB by Nucleotide ID:NM_001353125Re-query CCDS DB by Protein ID:NP_001340054Link to BLAST:NP_001340054.1

Chromosomal Locations for CCDS 93392.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 134507149 134507286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134531845 134531940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134532778 134532900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134537155 134537268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134545586 134545819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134546149 134546288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134549062 134549176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134550063 134550260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134551926 134552012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 134561377 134561535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1404 nt):
ATGAAACAGATTGACATAATGGTGGCTCATAAAAAATCTGAATGGGAAGGACGTACACATGCTCTAGAAA
CTTGCTTGAAAATCCGTGAACAGGAACTTAAGAGTCTTAGGAGTCAGTTGGATGTGACACATAAGGAGGT
TGGAATGTTGCATCAGCAGGTAGAAGAACATGAAAAAATCAAGCAAGAGATGACCATGGAATATAAGCAG
GAGTTGAAGAAACTACATGAAGAATTATGCATACTGAAGAGAAGCTATGAAAAGCTTCAGAAAAAGCAAA
TGAGGGAATTCAGAGGAAATACCAAAAATCACAGGGAAGATCGGTCTGAAATTGAGAGGTTAACTGCAAA
AATAGAGGAATTCCGTCAGAAATCGCTGGACTGGGAGAAGCAACGCTTGATTTATCAGCAACAGGTATCT
TCACTGGAGGCACAAAGGAAGGCTCTGGCTGAACAATCAGAGATAATTCAGGCTCAGCTTGTCAATCGGA
AACAGAAATTAGAGTCTGTGGAACTTTCTAGCCAATCAGAAATTCAACACTTAAGCAGTAAACTGGAGCG
GGCTAATGACACTATCTGTGCCAATGAGTTGGAAATAGAGCGCCTCACCATGAGGGTCAATGACTTGGTT
GGAACCAGTATGACTGTCCTACAGGAGCAGCAGCAAAAAGAAGAAAAATTGAGGGAATCTGAAAAACTAT
TAGAGGCTCTGCAGGAAGAAAAGAGAGAATTGAAGGCAGCTCTTCAGTCTCAAGAAAATCTCATACATGA
GGCCAGAATACAAAAGGAGAAGTTACAAGAAAAAGTAAAGGCAACTAACACTCAACATGCTGTAGAAGCT
ATAAGTTTGGAATCTGTGAGTGCAACGTGTAAACAGCTGAGCCAAGAACTAATGGAAAAATATGAAGAAC
TGAAGAGGATGGAAGCACATAACAATGAATACAAAGCAGAGATTAAGAAGTTGAAAGAACAGATTTTACA
GGGTGAACAAAGTTACAGTTCTGCACTAGAAGGAATGAAGATGGAAATCTCCCATCTAACTCAGGAGTTA
CATCAGCGAGATATCACTATTGCTTCCACCAAAGGTTCTTCCTCAGACATGGAAAAGCGACTCAGAGCAG
AGATGCAAAAGGCAGAAGACAAAGCAGTAGAGCATAAGGAGATTTTGGATCAGCTGGAGTCACTCAAATT
AGAAAATCGTCATCTTTCTGAAATGGTGATGAAATTGGAATTGGGTTTACATGAGTGTTCCTTGCCTGTA
TCTCCCCTTGGTTCAATAGCTACCAGATTTTTGGAAGAGGAGGAACTGAGGTCTCATCACATTCTAGAGC
GCTTGGATGCCCATATTGAAGAACTAAAAAGAGAGAGTGAAAAGACAGTGAGACAATTCACAGCCTTAAA
GTAG

Translation (467 aa):
MKQIDIMVAHKKSEWEGRTHALETCLKIREQELKSLRSQLDVTHKEVGMLHQQVEEHEKIKQEMTMEYKQ
ELKKLHEELCILKRSYEKLQKKQMREFRGNTKNHREDRSEIERLTAKIEEFRQKSLDWEKQRLIYQQQVS
SLEAQRKALAEQSEIIQAQLVNRKQKLESVELSSQSEIQHLSSKLERANDTICANELEIERLTMRVNDLV
GTSMTVLQEQQQKEEKLRESEKLLEALQEEKRELKAALQSQENLIHEARIQKEKLQEKVKATNTQHAVEA
ISLESVSATCKQLSQELMEKYEELKRMEAHNNEYKAEIKKLKEQILQGEQSYSSALEGMKMEISHLTQEL
HQRDITIASTKGSSSDMEKRLRAEMQKAEDKAVEHKEILDQLESLKLENRHLSEMVMKLELGLHECSLPV
SPLGSIATRFLEEEELRSHHILERLDAHIEELKRESEKTVRQFTALK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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