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Report for CCDS93361.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93361.1 Public Homo sapiens 3 KALRN 24 110 108 CCDS HistoryNCBI Gene:8997Re-query CCDS DB by CCDS ID:93361.1Re-query CCDS DB by GeneID:8997See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93361.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000684382.1 ENSP00000507150.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000684382.1Link to Ensembl Protein Viewer:ENSP00000507150.1Re-query CCDS DB by Nucleotide ID:ENST00000684382Re-query CCDS DB by Protein ID:ENSP00000507150
Original member Current member NCBI NM_001388416.1 NP_001375345.1 Accepted alive Link to Nucleotide Sequence:NM_001388416.1Link to Protein Sequence:NP_001375345.1Re-query CCDS DB by Nucleotide ID:NM_001388416Re-query CCDS DB by Protein ID:NP_001375345Link to BLAST:NP_001375345.1

Chromosomal Locations for CCDS 93361.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 124385004 124385036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124395135 124395304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124398697 124398871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124413470 124413665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124422812 124422978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124430656 124430775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124434334 124434525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124438888 124439037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124441945 124442059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124446161 124446276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124446763 124446885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124455177 124455359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124456610 124456728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124461890 124461956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124462524 124462633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124474663 124474732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124477245 124477334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124482808 124482900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124488204 124488315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124490694 124490884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124491323 124491424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124492740 124492882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124496311 124496413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 124518400 124518462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3003 nt):
ATGTCTGTTTCCTTCCACACACACACCAAAGAGTTGTGGACATGGATGGAAGACCTTCAGAAGGAGATGT
TGGAGGATGTCTGTGCAGATTCTGTGGATGCAGTCCAGGAACTGATCAAGCAGTTCCAGCAGCAGCAGAC
CGCCACTCTAGATGCCACACTCAATGTCATCAAGGAAGGCGAAGACCTTATCCAGCAGCTCAGGGACTCG
GCTGTGTCCAACAACAAAACACCCCACAGCAGCTCCATCAGCCACATCGAGTCGGTCCTGCAGCAGCTTG
ATGATGCCCAGGTGCAGATGGAGGAGCTGTTCCACGAGCGGAAGATCAAGCTGGACATCTTCCTGCAACT
GCGCATCTTTGAGCAGTACACCATCGAGGTGACAGCAGAGCTAGACGCCTGGAATGAAGACTTGCTTCGG
CAGATGAATGACTTCAACACAGAGGACCTAACCCTGGCAGAACAGCGGCTGCAGCGCCACACAGAACGGA
AGCTAGCCATGAACAACATGACCTTTGAGGTTATCCAGCAGGGACAGGATCTGCACCAGTACATCACGGA
GGTCCAGGCATCAGGAATTGAGTTGATCTGTGAAAAAGACATTGATCTGGCAGCCCAGGTGCAAGAGTTA
TTGGAATTTCTCCATGAGAAGCAGCATGAATTGGAGCTCAATGCAGAGCAGACTCATAAGCGGCTAGAGC
AGTGCCTCCAATTACGTCACCTCCAGGCTGAAGTCAAACAGGTTCTGGGATGGATCCGCAATGGAGAGTC
AATGCTCAACGCCAGCCTGGTCAATGCCAGCTCTTTGTCGGAAGCAGAGCAGCTGCAGCGGGAGCACGAG
CAGTTCCAACTGGCCATCGAGAAGACGCACCAGAGTGCCCTGCAGGTACAGCAGAAAGCCGAGGTGCTGC
TCCAGGCCGGCCACTACGATGCCGATGCCATCCGGGAATGTGCTGAGAAGGTGGCCCTCCACTGGCAGCA
GCTCATGCTGAAGATGGAAGACCGGCTAAAATTGGTCAATGCCTCTGTGGCCTTTTACAAAACTTCTGAA
CAGGTGTGTAGTGTCCTGGAGAGCTTAGAGCAAGAATACCGGAGAGATGAGGACTGGTGTGGTGGACGAG
ATAAGCTGGGGCCAGCAGCAGAGATCGACCATGTCATTCCCCTCATCAGCAAACATTTGGAACAAAAGGA
GGCCTTTCTTAAGGCCTGCACCCTGGCTCGGCGGAATGCTGAGGTGTTTCTCAAGTACATCCACAGGAAC
AACGTCAGCATGCCCAGTGTCGCCAGCCACACTCGGGGACCCGAGCAACAAGTGAAAGCCATCCTGAGTG
AGCTCCTGCAGAGGGAGAATCGCGTGCTGCATTTCTGGACCTTGAAGAAGCGGCGGTTAGACCAATGCCA
GCAATATGTGGTGTTCGAGCGCAGCGCTAAGCAGGCGCTTGACTGGATCCAAGAAACAGGTGAATTTTAC
CTCTCAACACATACCTCCACTGGAGAGACCACAGAGGAGACTCAGGAACTGCTGAAAGAATATGGGGAAT
TCAGGGTGCCTGCCAAGCAAACAAAGGAGAAGGTGAAGCTTCTGATTCAGCTGGCCGATAGCTTTGTGGA
AAAAGGCCACATTCATGCCACGGAGATAAGGAAATGGGTGACCACGGTGGACAAGCACTACAGAGATTTC
TCCCTGAGGATGGGAAAGTACCGATACTCACTGGAGAAAGCCCTAGGAGTCAACACAGAGGATAATAAGG
ACCTGGAGCTGGATATTATCCCAGCAAGCCTTTCGGATCGGGAGGTCAAGCTGCGGGACGCCAACCACGA
AGTCAATGAAGAGAAGCGGAAGTCAGCCCGGAAGAAAGAATTTATTATGGCTGAACTACTCCAGACAGAG
AAGGCTTATGTAAGGGATTTGCATGAGTGCTTAGAGACCTACCTGTGGGAAATGACCAGTGGTGTGGAGG
AGATCCCCCCTGGGATCCTCAATAAAGAGCATATCATCTTTGGCAACATCCAAGAGATCTACGATTTCCA
TAACAACATCTTCCTCAAAGAGCTGGAGAAGTACGAGCAACTGCCTGAGGATGTGGGACACTGCTTTGTT
ACCTGGGCAGACAAATTTCAGATGTATGTCACCTACTGTAAAAACAAGCCTGATTCCAACCAGCTTATCC
TGGAGCATGCGGGCACCTTCTTTGATGAGATACAACAGCGGCATGGTCTGGCCAACTCCATCTCTTCCTA
CCTAATTAAGCCTGTCCAAAGGATCACCAAATATCAACTGCTCCTGAAGGAACTTTTAACTTGCTGTGAA
GAAGGGAAAGGGGAGCTCAAGGATGGCCTGGAGGTGATGCTCAGTGTCCCAAAGAAAGCCAATGATGCCA
TGCATGTCAGCATGCTGGAAGGGTTCGACGAGAACCTGGATGTGCAGGGGGAGTTGATTCTCCAGGATGC
CTTTCAAGTGTGGGACCCGAAGTCGCTGATCCGGAAGGGGCGGGAGCGGCACTTGTTCCTCTTTGAGATC
TCCTTGGTTTTTAGCAAGGAGATCAAAGATTCTTCAGGACACACGAAATATGTTTACAAGAACAAGCTAC
TGACCTCAGAGCTGGGTGTGACCGAGCACGTGGAGGGCGATCCCTGCAAATTCGCCTTGTGGTCTGGGCG
CACCCCATCCTCAGACAATAAAACAGTGCTGAAAGCCTCCAACATTGAAACCAAGCAGGAGTGGATCAAG
AACATTCGAGAAGTGATTCAAGAAAGGATCATTCACCTGAAAGGAGCTTTAAAGGAGCCACTTCAGCTCC
CCAAAACACCAGCCAAACAGAGGAACAATAGTAAGAGGGATGGAGTGGAGGATATTGACAGCCAGGGGGA
TGGGAGCAGCCAACCAGACACCATCTCCATTGCTTCTAGGACCTCTCAGAACACAGTGGACAGTGACAAG
GATGGCAACCTTGTTCCTCGGTGGCACCTGGGACCTGGAGATCCTTTCTCCACTTACGTTTAG

Translation (1000 aa):
MSVSFHTHTKELWTWMEDLQKEMLEDVCADSVDAVQELIKQFQQQQTATLDATLNVIKEGEDLIQQLRDS
AVSNNKTPHSSSISHIESVLQQLDDAQVQMEELFHERKIKLDIFLQLRIFEQYTIEVTAELDAWNEDLLR
QMNDFNTEDLTLAEQRLQRHTERKLAMNNMTFEVIQQGQDLHQYITEVQASGIELICEKDIDLAAQVQEL
LEFLHEKQHELELNAEQTHKRLEQCLQLRHLQAEVKQVLGWIRNGESMLNASLVNASSLSEAEQLQREHE
QFQLAIEKTHQSALQVQQKAEVLLQAGHYDADAIRECAEKVALHWQQLMLKMEDRLKLVNASVAFYKTSE
QVCSVLESLEQEYRRDEDWCGGRDKLGPAAEIDHVIPLISKHLEQKEAFLKACTLARRNAEVFLKYIHRN
NVSMPSVASHTRGPEQQVKAILSELLQRENRVLHFWTLKKRRLDQCQQYVVFERSAKQALDWIQETGEFY
LSTHTSTGETTEETQELLKEYGEFRVPAKQTKEKVKLLIQLADSFVEKGHIHATEIRKWVTTVDKHYRDF
SLRMGKYRYSLEKALGVNTEDNKDLELDIIPASLSDREVKLRDANHEVNEEKRKSARKKEFIMAELLQTE
KAYVRDLHECLETYLWEMTSGVEEIPPGILNKEHIIFGNIQEIYDFHNNIFLKELEKYEQLPEDVGHCFV
TWADKFQMYVTYCKNKPDSNQLILEHAGTFFDEIQQRHGLANSISSYLIKPVQRITKYQLLLKELLTCCE
EGKGELKDGLEVMLSVPKKANDAMHVSMLEGFDENLDVQGELILQDAFQVWDPKSLIRKGRERHLFLFEI
SLVFSKEIKDSSGHTKYVYKNKLLTSELGVTEHVEGDPCKFALWSGRTPSSDNKTVLKASNIETKQEWIK
NIREVIQERIIHLKGALKEPLQLPKTPAKQRNNSKRDGVEDIDSQGDGSSQPDTISIASRTSQNTVDSDK
DGNLVPRWHLGPGDPFSTYV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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