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Report for CCDS93259.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93259.1 Public Homo sapiens 3 TMIE 24 110 108 CCDS HistoryNCBI Gene:259236Re-query CCDS DB by CCDS ID:93259.1Re-query CCDS DB by GeneID:259236See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93259.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000644830.1 ENSP00000495111.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000644830.1Link to Ensembl Protein Viewer:ENSP00000495111.1Re-query CCDS DB by Nucleotide ID:ENST00000644830Re-query CCDS DB by Protein ID:ENSP00000495111
Original member Current member NCBI NM_001370524.1 NP_001357453.1 Accepted alive Link to Nucleotide Sequence:NM_001370524.1Link to Protein Sequence:NP_001357453.1Re-query CCDS DB by Nucleotide ID:NM_001370524Re-query CCDS DB by Protein ID:NP_001357453Link to BLAST:NP_001357453.1
Original member Current member NCBI NM_001370525.1 NP_001357454.1 Accepted alive Link to Nucleotide Sequence:NM_001370525.1Link to Protein Sequence:NP_001357454.1Re-query CCDS DB by Nucleotide ID:NM_001370525Re-query CCDS DB by Protein ID:NP_001357454Link to BLAST:NP_001357454.1

Chromosomal Locations for CCDS 93259.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 46705856 46705907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 46709126 46709275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 46709579 46709688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (312 nt):
ATGCGCCTGTGGCACGTGGTGGGCATCTTTTCGCTCTTCGTGTTGTCCATCATCATCACGCTGTGCTGTG
TCTTCAACTGTCGTGTGCCACGGACCCGGAAGGAGATCGAAGCCCGGTACCTGCAGCGAAAGGCAGCCAA
GATGTACACAGACAAGCTGGAGACTGTGCCACCCCTCAATGAGCTCACAGAAGTCCCAGGAGAGGATAAG
AAGAAGAAGAAGAAGAAGAAGAAGGACAGTGTGGACACAGTGGCCATCAAAGTAGAGGAGGATGAGAAGA
ATGAGGCCAAGAAGAAGAAAGGAGAGAAATGA

Translation (103 aa):
MRLWHVVGIFSLFVLSIIITLCCVFNCRVPRTRKEIEARYLQRKAAKMYTDKLETVPPLNELTEVPGEDK
KKKKKKKKDSVDTVAIKVEEDEKNEAKKKKGEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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