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Report for CCDS93199.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93199.1 Public Homo sapiens 3 TTLL3 24 110 108 CCDS HistoryNCBI Gene:26140Re-query CCDS DB by CCDS ID:93199.1Re-query CCDS DB by GeneID:26140See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93199.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000685419.1 ENSP00000510679.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000685419.1Link to Ensembl Protein Viewer:ENSP00000510679.1Re-query CCDS DB by Nucleotide ID:ENST00000685419Re-query CCDS DB by Protein ID:ENSP00000510679
Original member Current member NCBI NM_001387446.1 NP_001374375.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001387446.1Link to Protein Sequence:NP_001374375.1Re-query CCDS DB by Nucleotide ID:NM_001387446Re-query CCDS DB by Protein ID:NP_001374375Link to BLAST:NP_001374375.1

Chromosomal Locations for CCDS 93199.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 9810662 9810709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9812943 9813111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9813248 9813345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9816074 9816202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9817645 9817759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9818822 9818920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9820546 9820741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9825800 9825948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9826997 9827240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9828960 9829395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9833104 9833245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9834681 9834907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 9835094 9835489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2448 nt):
ATGAACCGGCTCAGAAACGCCAAAATCTACGTGGAGAGAGCTGTCAAGCAGAAGAAGATCTTTACAATCC
AAGGCTGCTACCCGGTGATCCGGTGTCTCTTGCGCCGGAGGGGCTGGGTGGAGAAGAAGATGGTCCATCG
CTCAGGCCCCACCCTGCTGCCACCCCAGAAGGATCTGGATAGCTCAGCGATGGGTGACAGTGACACCACT
GAGGATGAGGATGAAGATGAGGACGAGGAGTTCCAGCCATCACAGCTGTTCGACTTCGATGATTTACTGA
AATTTGATGACCTAGATGGAACACATGCTCTGATGTCCCGCATGGTCCAGAATGAGATCCCCTACTTCAT
CTGGACCACTCGGCGGGATGTGCTCGACTGTCGCTTCCTCTCCAAGGATCAGATGATAAACCACTACGCC
CGGGCTGGCTCCTTTACCACAAAGGTGGGTCTATGTCTCAATCTCCGGAATTTGCCGTGGTTTGATGAGG
TTGATGCCAACTCCTTCTTCCCACGCTGCTACTGCCTGGGGGCTGAGGATGACAAAAAAGCCTTCATAGA
GGACTTCTGGCTGACTGCTGCCCGCAACGTTCTCAAGCTGGTGGTGAAGTCTGAGTGGAAGTCATACCCT
ATTCAGGCAGTAGAGGAAGAGGCCTCAGGAGACAAGCAGCCCAAGAAACAGGAGAAAAACCCAGTGTTGG
TGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCGTGCGAGGAGTACCTTAGCAACTTGGCCCACATGGA
CATCGACAAGGACCTGGAGGCCCCGCTGTACCTCACCCCCGAGGGCTGGTCCCTCTTCCTCCAGCGCTAC
TACCAAGTGGTCCACGAAGGGGCAGAACTCAGGCACCTCGACACTCAGGTCCAGCGCTGTGAGGACATCC
TGCAGCAGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCGCAACATCTGGATCGTGAAGCC
AGGAGCCAAGTCCCGCGGACGAGGCATCATGTGCATGGACCACCTGGAGGAGATGCTGAAGCTGGTGAAC
GGCAACCCCGTGGTGATGAAGGACGGCAAGTGGGTGGTGCAGAAGTATATTGAGCGGCCCCTCCTCATCT
TTGGCACCAAGTTTGACCTCAGACAGTGGTTCCTGGTAACTGACTGGAACCCACTTACCGTGTGGTTCTA
CCGCGACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCCTGAAGAACCTGGACAACTCAGTGCACCTG
TGCAACAACTCCATCCAGAAGCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACA
TGTGGTCTAGCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCAT
CGTGCCTGGCATGAAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAG
GCCAGCTTTGAGCTCTATGGCGCTGACTTCGTGTTCGGGGAGGACTTCCAGCCCTGGCTGATTGAGATCA
ACGCCAGCCCCACGATGGCACCCTCCACAGCAGTCACTGCCCGGCTCTGTGCTGGCGTGCAAGCTGACAC
CCTGCGCGTGGTCATTGACCGGATGCTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTCATCTATAAG
CAGCCTGCTGTGGAGGTGCCTCAATATGTGGGCATCCGGCTCCTGGTAGAGGGCTTCACCATCAAGAAGC
CCATGGCGATGTGTCATCGGCGGATGGGGGTCCGCCCAGCAGTCCCTCTGCTGACCCAGCGAGGCTCTGG
GGAAGCCCGTCACCACTTCCCCAGCCTCCACACCAAGGCCCAGCTGCCTTCTCCCCATGTACTCCGACAC
CAGGGCCAGGTCCTCAGACGACAGCACAGCAAGCTGGTGGGCACTAAGGCCCTGTCGACCACAGGCAAGG
CCTTGAGGACTCTACCCACGGCTAAGGTCTTCATTTCCCTCCCACCGAACCTTGATTTCAAGGTGGCACC
CAGCATCCTGAAGCCAAGAAAGGCTCCTGCTCTCCTGTGCCTCCGAGGCCCCCAGCTGGAAGTGCCTTGT
TGCCTCTGCCCTTTGAAGTCGGAACAATTCCTAGCACCTGTCGGAAGGTCAAGGCCAAAGGCAAATTCAA
GGCCAGACTGTGACAAACCCAGGGCTGAGGCCTGCCCCATGAAGAGGCTGAGCCCCCTGAAACCCCTGCC
CCTTGTTGGTACATTCCAGAGGCGCAGGGGCCTGGGGGATATGAAGCTAGGGAAGCCCCTGCTTCGATTC
CCCACTGCCCTTGTCCTGGATCCAACACCAAATAAAAAGAAACAAGTGAAGTATTTGGGGCTTGACTCCA
TTGCTGTTGGAGGGTCAAGAGTGGATGGGGCGAGGCCGTGTACCCCAGGGTCCACAGCAAGAGCCTGA

Translation (815 aa):
MNRLRNAKIYVERAVKQKKIFTIQGCYPVIRCLLRRRGWVEKKMVHRSGPTLLPPQKDLDSSAMGDSDTT
EDEDEDEDEEFQPSQLFDFDDLLKFDDLDGTHALMSRMVQNEIPYFIWTTRRDVLDCRFLSKDQMINHYA
RAGSFTTKVGLCLNLRNLPWFDEVDANSFFPRCYCLGAEDDKKAFIEDFWLTAARNVLKLVVKSEWKSYP
IQAVEEEASGDKQPKKQEKNPVLVSPEFVDEALCACEEYLSNLAHMDIDKDLEAPLYLTPEGWSLFLQRY
YQVVHEGAELRHLDTQVQRCEDILQQLQAVVPQIDMEGDRNIWIVKPGAKSRGRGIMCMDHLEEMLKLVN
GNPVVMKDGKWVVQKYIERPLLIFGTKFDLRQWFLVTDWNPLTVWFYRDSYIRFSTQPFSLKNLDNSVHL
CNNSIQKHLENSCHRHPLLPPDNMWSSQRFQAHLQEMGAPNAWSTIIVPGMKDAVIHALQTSQDTVQCRK
ASFELYGADFVFGEDFQPWLIEINASPTMAPSTAVTARLCAGVQADTLRVVIDRMLDRNCDTGAFELIYK
QPAVEVPQYVGIRLLVEGFTIKKPMAMCHRRMGVRPAVPLLTQRGSGEARHHFPSLHTKAQLPSPHVLRH
QGQVLRRQHSKLVGTKALSTTGKALRTLPTAKVFISLPPNLDFKVAPSILKPRKAPALLCLRGPQLEVPC
CLCPLKSEQFLAPVGRSRPKANSRPDCDKPRAEACPMKRLSPLKPLPLVGTFQRRRGLGDMKLGKPLLRF
PTALVLDPTPNKKKQVKYLGLDSIAVGGSRVDGARPCTPGSTARA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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