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Report for CCDS93038.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93038.1 Public Homo sapiens 20 NNAT 24 110 108 CCDS HistoryNCBI Gene:4826Re-query CCDS DB by CCDS ID:93038.1Re-query CCDS DB by GeneID:4826See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93038.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000649309.1 ENSP00000497857.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000649309.1Link to Ensembl Protein Viewer:ENSP00000497857.1Re-query CCDS DB by Nucleotide ID:ENST00000649309Re-query CCDS DB by Protein ID:ENSP00000497857
Original member Current member NCBI NM_001322802.2 NP_001309731.1 Accepted alive Link to Nucleotide Sequence:NM_001322802.2Link to Protein Sequence:NP_001309731.1Re-query CCDS DB by Nucleotide ID:NM_001322802Re-query CCDS DB by Protein ID:NP_001309731Link to BLAST:NP_001309731.1

Chromosomal Locations for CCDS 93038.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 37521332 37521403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 37522358 37522433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 37522667 37522896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (378 nt):
ATGGCGGCAGTGGCGGCGGCCTCGGCTGAACTGCTCATCATCGGCTGGTACATCTTCCGCGTGCTGCTGC
AGGTGTTCCTGGAATGCTGCATTTACTGGGTAGGATTCGCTTTTCGAAATCCTCCAGGGACACAGCCCAT
TGCGAGAAGTGTTCAGGTACTCCCTGCAGAAGCTGGCATACACGGTGTCGCGGACCGGGCGGCAGGTGTT
GGGGGAGCGCAGGCAGCGAGCCCCCAACTGAGGCCCCAGCTCCCAGCCCTGGGCGGCCGTATCATCAGGT
GCTCCTGTGCATCTCGGCCAGCACGGGAGCCAGTGCCGCGCAGGAATGTGGGGTCCCCTGTGTTCCCTCG
CCAGAGGAGCACTTGGCAAGGTCAGTGA

Translation (125 aa):
MAAVAAASAELLIIGWYIFRVLLQVFLECCIYWVGFAFRNPPGTQPIARSVQVLPAEAGIHGVADRAAGV
GGAQAASPQLRPQLPALGGRIIRCSCASRPAREPVPRRNVGSPVFPRQRSTWQGQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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