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Report for CCDS92928.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92928.1 Public Homo sapiens 2 SUMO1 24 110 108 CCDS HistoryNCBI Gene:7341Re-query CCDS DB by CCDS ID:92928.1Re-query CCDS DB by GeneID:7341See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92928.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409712.5 ENSP00000386296.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409712.5Link to Ensembl Protein Viewer:ENSP00000386296.1Re-query CCDS DB by Nucleotide ID:ENST00000409712Re-query CCDS DB by Protein ID:ENSP00000386296
Original member Current member NCBI NM_001371393.1 NP_001358322.1 Accepted alive Link to Nucleotide Sequence:NM_001371393.1Link to Protein Sequence:NP_001358322.1Re-query CCDS DB by Nucleotide ID:NM_001371393Re-query CCDS DB by Protein ID:NP_001358322Link to BLAST:NP_001358322.1

Chromosomal Locations for CCDS 92928.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 202207253 202207321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 202214357 202214434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 202220032 202220106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 202238440 202238451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (234 nt):
ATGTCTGACCAGGAGGCAAAACCTTCAACTGAGGACTTGGGGGATAAGAAGGAAGGTGAATATATTAAAC
TCAAAGTCATTGGACAGGATAGCAGTGAGATTCACTTCAAAGTGAAAATGACAACACATCTCAAGAAACT
CAAAGAATCATACTGTCAAAGACAGCTGGGAATGGAGGAAGAAGATGTGATTGAAGTTTATCAGGAACAA
ACGGGGGGTCATTCAACAGTTTAG

Translation (77 aa):
MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQLGMEEEDVIEVYQEQ
TGGHSTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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