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Report for CCDS92675.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92675.1 Public Homo sapiens 19 ZNF600 24 110 108 CCDS HistoryNCBI Gene:162966Re-query CCDS DB by CCDS ID:92675.1Re-query CCDS DB by GeneID:162966See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92675.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000648973.1 ENSP00000497540.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000648973.1Link to Ensembl Protein Viewer:ENSP00000497540.1Re-query CCDS DB by Nucleotide ID:ENST00000648973Re-query CCDS DB by Protein ID:ENSP00000497540
Original member Current member EBI ENST00000692063.1 ENSP00000509267.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000692063.1Link to Ensembl Protein Viewer:ENSP00000509267.1Re-query CCDS DB by Nucleotide ID:ENST00000692063Re-query CCDS DB by Protein ID:ENSP00000509267
Original member Current member EBI ENST00000688329.1 ENSP00000509375.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000688329.1Link to Ensembl Protein Viewer:ENSP00000509375.1Re-query CCDS DB by Nucleotide ID:ENST00000688329Re-query CCDS DB by Protein ID:ENSP00000509375
Original member Current member EBI ENST00000685388.1 ENSP00000510246.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000685388.1Link to Ensembl Protein Viewer:ENSP00000510246.1Re-query CCDS DB by Nucleotide ID:ENST00000685388Re-query CCDS DB by Protein ID:ENSP00000510246
Original member Current member NCBI NM_001321866.4 NP_001308795.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001321866.4Link to Protein Sequence:NP_001308795.1Re-query CCDS DB by Nucleotide ID:NM_001321866Re-query CCDS DB by Protein ID:NP_001308795Link to BLAST:NP_001308795.1
Original member Current member NCBI NM_001321867.3 NP_001308796.1 Accepted alive Link to Nucleotide Sequence:NM_001321867.3Link to Protein Sequence:NP_001308796.1Re-query CCDS DB by Nucleotide ID:NM_001321867Re-query CCDS DB by Protein ID:NP_001308796Link to BLAST:NP_001308796.1

Chromosomal Locations for CCDS 92675.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 52765587 52767772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52774575 52774701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52778826 52778888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2376 nt):
ATGTTATGTGAAGAAGCAGCTCAGAAGAGGAAAGGAAAGGAGCCAGGCATGGCTCTTCCTCAGGGACGCT
TGACTTTCAGGGATGTGGCTATAGAATTCTCATTGGCAGAGTGGAAATGCCTGAACCCTTCGCAGAGGGC
TTTGTACAGGGAAGTGATGTTGGAGAACTACAGGAACCTGGAAGCTGTGGATATCTCTTCCAAACGCATG
ATGAAGGAGGTCTTGTCAACAGGGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAGATATC
AAAGTTATCACATTGGAGATTTTTGCTTCCAGGAAATTGAGAAAGAAATTCATGATATTGAGTTTCAGTG
TCAAGAAGATGAAAGAAATGGCCATGAAGCACCCATGACAAAAATAAAAAAGTTGACTGGTAGCACAGAC
CAACATGATCACAGGCATGCTGGAAACAAGCCTATTAAAGATCAGCTTGGATCAAGCTTTTATTCACATC
TGCCTGAACTCCACATAATTCAGATCAAAGGTAAAATTGGTAATCAATTTGAGAAGTCTACCAGTGATGC
TCCCTCGGTTTCAACATCCCAAAGAATTTCTCCTAGGCCCCAAATCCATATTTCTAATAACTATGGGAAT
AATTCCCCGAATTCTTCACTACTCCCACAAAAACAGGAAGTATACATGAGAGAAAAATCTTTCCAATGTA
ATGAGAGTGGCAAAGCCTTTAATTGTAGCTCACTCTTAAGGAAACACCAGATACCCCATTTAGGAGACAA
ACAATATAAATGTGATGTATGTGGCAAGCTCTTTAATCACAAGCAATACCTTACATGCCATTGTAGATGT
CACACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGAAAGTCCTTCAGTCAGGTATCATCCCTTACAT
GCCATCGTAGACTTCACACTGCAGTAAAATCTCACAAGTGTAATGAGTGTGGCAAGATCTTTGGTCAAAA
TTCAGCCCTTGTAATTCATAAGGCAATTCATACTGGAGAAAAACCTTACAAGTGTAATGAATGTGACAAA
GCTTTTAATCAGCAATCAAACCTTGCACGTCATCGTAGAATTCATACTGGAGAGAAACCTTACAAATGTG
AAGAATGTGACAAAGTTTTCAGTCGGAAATCAACCCTTGAGTCACATAAGAGAATTCATACTGGAGAGAA
ACCATACAAATGTAAGGTTTGTGACACAGCTTTCACATGGAATTCTCAGCTGGCAAGACATAAAAGAATT
CACACTGGAGAGAAAACTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCACAAGTCATCCCTTGTAT
GCCATCATAGACTTCATGGTGGAGAGAAATCTTACAAATGTAAGGTCTGTGACAAGGCTTTTGCGTGGAA
TTCACACCTGGTAAGACATACTAGAATTCATAGTGGAGGAAAACCTTACAAGTGTAATGAATGTGGGAAG
ACCTTTGGTCAAAATTCAGATCTTCTAATTCATAAGTCAATTCATACTGGAGAGCAACCTTACAAATATG
AAGAATGTGAAAAGGTTTTCAGTTGTGGATCAACCCTTGAGACACATAAGATAATTCACACCGGAGAGAA
ACCATACAAATGTAAGGTTTGTGACAAGGCTTTTGCGTGTCATTCCTATCTGGCAAAACATACTAGAATT
CATAGTGGAGAGAAACCTTACAAGTGTAATGAGTGCAGCAAGACCTTCCGTCTGAGGTCATACCTTGCAA
GCCATCGCAGAGTTCATAGTGGTGAGAAACCTTACAAGTGTAATGAGTGCAGCAAGACCTTCAGTCAGAG
GTCATACCTTCATTGCCATCGTAGACTTCATAGTGGTGAGAAACCTTACAAGTGTAATGAGTGTGGCAAG
ACCTTCAGTCACAAGCCATCCCTTGTTCACCATCGTAGACTTCATACTGGAGAGAAATCTTACAAATGTA
CGGTTTGTGACAAGGCTTTCGTGCGTAATTCATACCTGGCAAGACATACCAGAATTCACACTGCAGAGAA
ACCTTACAAGTGTAATGAATGTGGGAAGGCTTTTAATCAACAATCACAACTTTCACTTCATCATAGAATT
CATGCTGGGGAGAAACTTTACAAATGTGAAACATGTGACAAAGTTTTCAGTCGCAAATCACACCTTAAAA
GACATAGGAGAATTCATCCTGGAAAGAAACCATACAAATGTAAGGTTTGTGACAAGACTTTTGGGAGTGA
TTCACACCTGAAACAACATACTGGACTTCACACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAA
GCCTTTAGCAAGCAGTCAACACTTATTCACCATCAGGCAGTTCATGGTGTAGGGAAACTTGACTAA

Translation (791 aa):
MLCEEAAQKRKGKEPGMALPQGRLTFRDVAIEFSLAEWKCLNPSQRALYREVMLENYRNLEAVDISSKRM
MKEVLSTGQGNTEVIHTGTLQRYQSYHIGDFCFQEIEKEIHDIEFQCQEDERNGHEAPMTKIKKLTGSTD
QHDHRHAGNKPIKDQLGSSFYSHLPELHIIQIKGKIGNQFEKSTSDAPSVSTSQRISPRPQIHISNNYGN
NSPNSSLLPQKQEVYMREKSFQCNESGKAFNCSSLLRKHQIPHLGDKQYKCDVCGKLFNHKQYLTCHCRC
HTGEKPYKCNECGKSFSQVSSLTCHRRLHTAVKSHKCNECGKIFGQNSALVIHKAIHTGEKPYKCNECDK
AFNQQSNLARHRRIHTGEKPYKCEECDKVFSRKSTLESHKRIHTGEKPYKCKVCDTAFTWNSQLARHKRI
HTGEKTYKCNECGKTFSHKSSLVCHHRLHGGEKSYKCKVCDKAFAWNSHLVRHTRIHSGGKPYKCNECGK
TFGQNSDLLIHKSIHTGEQPYKYEECEKVFSCGSTLETHKIIHTGEKPYKCKVCDKAFACHSYLAKHTRI
HSGEKPYKCNECSKTFRLRSYLASHRRVHSGEKPYKCNECSKTFSQRSYLHCHRRLHSGEKPYKCNECGK
TFSHKPSLVHHRRLHTGEKSYKCTVCDKAFVRNSYLARHTRIHTAEKPYKCNECGKAFNQQSQLSLHHRI
HAGEKLYKCETCDKVFSRKSHLKRHRRIHPGKKPYKCKVCDKTFGSDSHLKQHTGLHTGEKPYKCNECGK
AFSKQSTLIHHQAVHGVGKLD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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