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Report for CCDS92638.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92638.1 Public Homo sapiens 19 ZNF235 24 110 108 CCDS HistoryNCBI Gene:9310Re-query CCDS DB by CCDS ID:92638.1Re-query CCDS DB by GeneID:9310See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92638.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000650576.1 ENSP00000497018.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000650576.1Link to Ensembl Protein Viewer:ENSP00000497018.1Re-query CCDS DB by Nucleotide ID:ENST00000650576Re-query CCDS DB by Protein ID:ENSP00000497018
Current member NCBI NM_001411071.1 NP_001398000.1 Accepted alive Link to Nucleotide Sequence:NM_001411071.1Link to Protein Sequence:NP_001398000.1Re-query CCDS DB by Nucleotide ID:NM_001411071Re-query CCDS DB by Protein ID:NP_001398000Link to BLAST:NP_001398000.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001398000.1 734 Q14590-2 734 100% 0 0

Chromosomal Locations for CCDS 92638.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 44287218 44289196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44298820 44298903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44299606 44299732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44303390 44303404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2205 nt):
ATGACCAAGTTCCAGGAGGCAGTGACATTCAAGGATGTGGCTGTGGCCTTCACTGAGGAGGAGCTGGGGC
TGCTGGACTCTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTGGAGAACTTTAGGAACCTGGTTTCAGT
GGGACATCAGTCCTTCAAACCAGATATGATATCCCAGTTGGAGAGGGAAGAAAAGCTTTGGATGAAGGAG
CTTCAAACCCAAAGAGGAGACAGGAATCAAAATGAGATGGCAACTCTTCACAAAGCAGGATTAAGGTGCT
TTTCACTGGGAGAGCTTTCATGCTGGCAAATCAAGAGACACATTGCGAGCAAATTAGCCAGAAGTCAAGA
CTCCATGATAAATATTGAAGGAAAGAGCTCTCAGTTCCCCAAGCACCATGATTCCCCCTGTCAAGTGGGA
GCAGGAGAATCTATTCAAGCTTCTGTGGATGACAACTGTCTAGTGAATCACATAGGGGATCATTCCAGTA
TCATTGAAAATCAAGAATTTCCAACTGGGAAAGTTCCGAATTCTTGGAGTAAAATATATCTGAATGAGAC
ACAGAATTATCAGAGAAGTTGTAAGCAGACTCAGATGAAAAACAAACTATGTATATTTGCTCCATATGTT
GACATTTTCAGTTGTATTTCACACCACCATGATGATAATATAGTGCACAAAAGAGATAAAGTTCATAGCA
ATAGTGATTGTGGTAAAGATACCCTAAAGGTATCACCTCTTACCCAGCGTAGTATTCACACAGGACAGAA
AACCTACCAGGGTAATGAATGTGAAGAAGCCTTCAATGATAGCTCCAGTCTTGAACTTCATAAACAGGTA
CACTTGGGAAAGAAGTCTCCAGCGTGTAGTACACATGAGAAGGACACCAGTTATAGCTCAGGTATTCCTG
TTCAACAAAGTGTTCGTACTGGGAAAAAACGCTATTGGTGTCATGAATGTGGTAAAGGTTTCAGTCAGAG
CTCAAATCTGCAAACTCATCAGAGAGTCCACACAGGGGAGAAACCCTATACATGCCACGAGTGTGGTAAG
AGCTTTAATCAGAGCTCACATCTTTATGCTCATTTGCCTATTCACACAGGAGAGAAGCCCTATAGATGTG
ACAGTTGTGGGAAGGGCTTCAGTCGTAGCACAGATCTTAACATTCATTGCAGAGTTCACACTGGAGAGAA
ACCTTATAAATGTGAGGTGTGTGGGAAGGGCTTCACTCAGAGATCACATCTTCAGGCCCATGAAAGAATT
CACACTGGAGAGAAACCATATAAATGTGGGGATTGTGGTAAACGCTTTAGTTGTAGCTCAAATCTTCATA
CCCATCAGAGAGTCCACACTGAAGAAAAACCATACAAATGTGATGAGTGTGGTAAGTGCTTTAGTTTGAG
CTTTAATCTTCATAGTCATCAACGAGTCCACACAGGAGAAAAACCATATAAATGTGAAGAGTGTGGTAAG
GGTTTTAGTTCAGCCTCAAGTTTCCAGAGCCATCAGAGGGTCCATACAGGAGAGAAACCATTTCGATGCA
ACGTGTGTGGGAAAGGCTTCAGTCAGAGTTCATACTTTCAAGCACATCAGAGAGTCCACACTGGAGAAAA
ACCATACAAATGTGAAGTGTGTGGGAAGCGCTTCAATTGGAGCTTGAATCTTCACAATCATCAGAGAGTC
CACACCGGAGAGAAACCCTACAAATGTGAAGAGTGTGGTAAGGGTTTCAGTCAGGCTTCAAATCTTCAAG
CCCATCAGAGCGTCCACACTGGGGAAAAACCATTCAAGTGTGATGCATGTCAGAAGCGATTCAGTCAGGC
CTCACACCTTCAAGCCCATCAGAGAGTCCACACCGGAGAGAAACCATATAAATGTGACACTTGTGGTAAG
GCCTTCAGCCAGAGGTCAAATCTTCAAGTCCATCAGATAATTCACACTGGAGAGAAACCATTTAAATGTG
AGGAATGTGGGAAAGAATTCAGTTGGAGTGCTGGTCTCAGTGCCCATCAGAGGGTCCACACAGGAGAGAA
ACCCTATACGTGTCAGCAGTGTGGGAAGGGCTTCAGTCAGGCCTCACATTTTCACACACACCAGAGAGTC
CACACTGGAGAGAGGCCTTACATATGTGATGTCTGTTGTAAGGGCTTCAGTCAGAGGTCACATCTCATCT
ACCATCAGAGAGTCCACACTGGAGGGAATCTGTAG

Translation (734 aa):
MTKFQEAVTFKDVAVAFTEEELGLLDSAQRKLYRDVMLENFRNLVSVGHQSFKPDMISQLEREEKLWMKE
LQTQRGDRNQNEMATLHKAGLRCFSLGELSCWQIKRHIASKLARSQDSMINIEGKSSQFPKHHDSPCQVG
AGESIQASVDDNCLVNHIGDHSSIIENQEFPTGKVPNSWSKIYLNETQNYQRSCKQTQMKNKLCIFAPYV
DIFSCISHHHDDNIVHKRDKVHSNSDCGKDTLKVSPLTQRSIHTGQKTYQGNECEEAFNDSSSLELHKQV
HLGKKSPACSTHEKDTSYSSGIPVQQSVRTGKKRYWCHECGKGFSQSSNLQTHQRVHTGEKPYTCHECGK
SFNQSSHLYAHLPIHTGEKPYRCDSCGKGFSRSTDLNIHCRVHTGEKPYKCEVCGKGFTQRSHLQAHERI
HTGEKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDECGKCFSLSFNLHSHQRVHTGEKPYKCEECGK
GFSSASSFQSHQRVHTGEKPFRCNVCGKGFSQSSYFQAHQRVHTGEKPYKCEVCGKRFNWSLNLHNHQRV
HTGEKPYKCEECGKGFSQASNLQAHQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTGEKPYKCDTCGK
AFSQRSNLQVHQIIHTGEKPFKCEECGKEFSWSAGLSAHQRVHTGEKPYTCQQCGKGFSQASHFHTHQRV
HTGERPYICDVCCKGFSQRSHLIYHQRVHTGGNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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