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Report for CCDS92586.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92586.1 Public Homo sapiens 19 FXYD3 24 110 108 CCDS HistoryNCBI Gene:5349Re-query CCDS DB by CCDS ID:92586.1Re-query CCDS DB by GeneID:5349See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92586.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000603524.5 ENSP00000474223.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000603524.5Link to Ensembl Protein Viewer:ENSP00000474223.1Re-query CCDS DB by Nucleotide ID:ENST00000603524Re-query CCDS DB by Protein ID:ENSP00000474223
Original member Current member EBI ENST00000604804.5 ENSP00000475056.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000604804.5Link to Ensembl Protein Viewer:ENSP00000475056.1Re-query CCDS DB by Nucleotide ID:ENST00000604804Re-query CCDS DB by Protein ID:ENSP00000475056
Original member Current member NCBI NM_001387354.1 NP_001374283.1 Accepted alive Link to Nucleotide Sequence:NM_001387354.1Link to Protein Sequence:NP_001374283.1Re-query CCDS DB by Nucleotide ID:NM_001387354Re-query CCDS DB by Protein ID:NP_001374283Link to BLAST:NP_001374283.1

Chromosomal Locations for CCDS 92586.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 35119377 35119416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35121078 35121110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35121222 35121245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35122678 35122839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35122918 35122954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35123271 35123308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35123441 35123457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (351 nt):
ATGCAGAAGGTGACCCTGGGCCTGCTTGTGTTCCTGGCAGGCTTTCCTGTCCTGGACGCCAATGACCTAG
AAGATAAAAACAGTCCTTTCTACTATGGTGCTCCATATATATTTGTCAAGAGAATGGGGGGACAGATGGA
GAGGACACAGGCTGGCACTGAGGTCCCCTCCACTTTCCTCCTAGACTGGCACAGCCTCCAGGTTGGCGGG
CTCATCTGCGCTGGGGTTCTGTGCGCCATGGGCATCATCATCGTCATGAGTGCAAAATGCAAATGCAAGT
TTGGCCAGAAGTCCGGTCACCATCCAGGGGAGACTCCACCTCTCATCACCCCAGGCTCAGCCCAAAGCTG
A

Translation (116 aa):
MQKVTLGLLVFLAGFPVLDANDLEDKNSPFYYGAPYIFVKRMGGQMERTQAGTEVPSTFLLDWHSLQVGG
LICAGVLCAMGIIIVMSAKCKCKFGQKSGHHPGETPPLITPGSAQS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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