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Report for CCDS91800.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91800.1 Public Homo sapiens 13 STARD13 24 110 108 CCDS HistoryNCBI Gene:90627Re-query CCDS DB by CCDS ID:91800.1Re-query CCDS DB by GeneID:90627See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91800.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000567873.2 ENSP00000456233.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000567873.2Link to Ensembl Protein Viewer:ENSP00000456233.2Re-query CCDS DB by Nucleotide ID:ENST00000567873Re-query CCDS DB by Protein ID:ENSP00000456233
Current member NCBI NM_001411014.1 NP_001397943.1 Accepted alive Link to Nucleotide Sequence:NM_001411014.1Link to Protein Sequence:NP_001397943.1Re-query CCDS DB by Nucleotide ID:NM_001411014Re-query CCDS DB by Protein ID:NP_001397943Link to BLAST:NP_001397943.1

Chromosomal Locations for CCDS 91800.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 33105593 33105710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33106758 33106934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33109873 33110090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33110686 33110907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33111778 33111892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33112721 33112931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33118065 33118263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33126081 33126240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33127373 33127546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33128929 33130289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33142310 33142373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33165337 33165418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33167551 33167622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 33350290 33350413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3297 nt):
ATGACCAGCAAACGGAAACCTTGCCAAACGCAGCTCAGGAGATCCATCAGTGAGCAGTTGCGGGACTCCA
CGGCCAGAGCCTGGGATCTGCTGTGGAAGAACGTCCGGGAGAGGCGGCTGGCAGAAATTGAGGCAAAAGA
AGCATGTGACTGGCTCCGTGCTGCCGGGTTCCCGCAATACGCTCAGTTATATGAGGATTCACAATTTCCC
ATCAACATTGTGGCTGTCAAGAATGATCATGATTTTCTTGAAAAGGACCTTGTAGAACCTCTTTGCAGAC
GACTAAATACGTTGAACAAGTGTGCCTCAATGAAACTTGATGTGAACTTCCAAAGGAAAAAGGGTGACGA
CTCCGATGAGGAAGATCTTTGTATCAGCAACAAATGGACTTTCCAAAGAACCAGTCGCAGGTGGTCTCGT
GTGGACGACCTCTACACGCTGCTCCCTCGAGGAGACAGAAATGGGTCACCGGGAGGCACGGGGATGAGGA
ACACGACCAGCAGTGAGAGCGTCCTCACAGACCTGAGCGAGCCTGAGGTCTGCTCCATTCACAGCGAAAG
CAGTGGAGGCAGCGACAGTCGCAGCCAGCCGGGCCAGTGCTGTACAGACAACCCGGTCATGCTGGATGCC
CCACTCGTCAGCAGCAGCCTCCCACAGCCCCCCAGAGATGTCCTCAACCACCCCTTCCACCCCAAGAATG
AGAAGCCCACGAGGGCTAGGGCCAAATCATTTTTGAAACGCATGGAAACACTCCGAGGGAAGGGAGCCCA
CGGGAGGCATAAGGGGTCTGGGCGGACAGGTGGCCTGGTGATCAGTGGGCCCATGTTGCAGCAGGAGCCA
GAGTCCTTTAAGGCTATGCAGTGCATCCAAATACCAAATGGAGATCTCCAGAATTCGCCGCCACCTGCCT
GCAGAAAAGGGCTCCCATGCTCTGGCAAGTCGAGTGGCGAGAGCAGCCCGTCGGAGCACAGCAGCAGCGG
GGTGAGCACGCCCTGCCTGAAGGAACGCAAGTGCCACGAGGCCAACAAGCGCGGGGGCATGTACTTGGAG
GACCTAGATGTGCTGGCGGGGACAGCACTGCCGGATGCAGGGGACCAAAGCCGTATGCATGAATTTCACT
CCCAAGAGAATTTGGTGGTGCATATTCCCAAGGATCACAAACCAGGAACATTCCCCAAGGCACTTTCTAT
TGAAAGCCTCTCTCCCACAGATAGTAGCAATGGGGTTAATTGGAGGACCGGTAGCATCTCCCTGGGCAGA
GAGCAGGTCCCTGGTGCCAGGGAGCCCCGGCTCATGGCGTCCTGCCACAGAGCCAGCCGAGTCAGTATCT
ATGACAATGTCCCTGGCTCCCATCTGTATGCCAGCACAGGAGATCTTTTGGACTTGGAGAAAGATGACCT
TTTCCCTCACTTGGATGACATTCTGCAGCATGTCAATGGGCTCCAAGAGGTAGTCGATGACTGGTCCAAA
GATGTCTTGCCTGAACTGCAAACTCATGATACATTGGTTGGGGAACCTGGCTTATCCACCTTTCCATCTC
CTAATCAGATCACCTTAGATTTTGAAGGTAACTCTGTCTCAGAAGGTCGGACGACACCCAGTGATGTGGA
AAGAGATGTAACATCTCTTAATGAATCTGAGCCTCCTGGGGTCAGAGACAGGAGGGATTCTGGTGTAGGG
GCCTCTCTGACCAGGCCAAACAGGCGACTCCGATGGAACAGTTTCCAGCTGTCGCACCAGCCCCGGCCGG
CCCCAGCATCGCCCCACATCAGCAGCCAGACGGCCAGCCAGCTGAGCCTGCTCCAGCGCTTCTCACTGCT
CCGCCTCACGGCCATCATGGAGAAGCACTCCATGTCCAACAAGCACGGCTGGACATGGTCAGTTCCAAAG
TTCATGAAGAGGATGAAAGTTCCCGACTACAAAGACAAGGCTGTCTTTGGCGTTCCTCTCATAGTCCACG
TCCAAAGAACGGGACAGCCCCTGCCTCAAAGTATTCAGCAAGCACTGAGATATCTACGCAGCAACTGCCT
CGATCAGGTGGGTCTTTTTCGCAAATCAGGAGTGAAGTCTCGAATCCATGCCCTTCGCCAAATGAATGAA
AACTTCCCTGAGAACGTCAACTATGAAGACCAGTCTGCTTATGATGTGGCGGATATGGTGAAACAGTTCT
TCCGGGACCTCCCTGAGCCTCTTTTCACCAACAAGCTCAGTGAGACCTTTCTCCATATCTATCAGTATGT
CTCCAAAGAGCAGCGGCTGCAGGCCGTGCAGGCTGCCATCCTGCTACTGGCCGATGAGAACAGGGAGGTC
CTGCAGACGCTCTTGTGTTTCCTGAACGACGTCGTCAACTTGGTGGAAGAGAATCAGATGACGCCCATGA
ACCTGGCAGTGTGTCTGGCCCCCTCCCTCTTTCATCTTAATTTATTGAAGAAAGAAAGCTCTCCACGAGT
CATACAGAAGAAATATGCCACTGGGAAGCCAGATCAAAAGGACCTCAACGAGAATCTGGCAGCAGCTCAG
GGGCTAGCGCACATGATCATGGAATGCGACAGACTTTTTGAGGTTCCACACGAGTTGGTGGCCCAGTCTC
GTAACTCGTATGTGGAGGCTGAGATCCACGTGCCAACCCTGGAAGAATTGGGGACACAGCTGGAGGAGAG
TGGGGCAACTTTCCACACTTACCTGAACCATCTCATCCAGGGCCTCCAGAAAGAAGCCAAGGAGAAGTTC
AAAGGATGGGTCACGTGCTCCAGCACGGACAATACAGATCTTGCTTTCAAAAAGGTGGGCGACGGGAACC
CGCTGAAGCTGTGGAAGGCTTCTGTGGAGGTGGAAGCACCCCCCTCAGTGGTCCTGAACCGCGTGCTGAG
AGAGCGCCACCTGTGGGACGAGGACTTTGTGCAGTGGAAGGTTGTGGAAACTCTAGACAGGCAAACAGAG
ATCTACCAGTATGTGCTGAACAGCATGGCTCCCCATCCTTCCAGAGACTTTGTGGTTCTCAGGACCTGGA
AAACTGATTTGCCCAAAGGAATGTGTACCCTGGTGTCCCTCTCCGTGGAGCATGAGGAAGCCCAGCTCCT
GGGTGGTGTGCGAGCAGTGGTGATGGACTCGCAGTACTTGATAGAACCGTGTGGCTCTGGCAAGTCAAGA
CTGACTCACATCTGCAGGATAGACCTGAAAGGTCACTCCCCAGAATGGTACAGCAAAGGCTTTGGACATC
TGTGTGCAGCAGAAGTTGCCAGGATTAGAAACTCTTTCCAGCCCCTCATTGCTGAGGGCCCAGAAACTAA
AATCTGA

Translation (1098 aa):
MTSKRKPCQTQLRRSISEQLRDSTARAWDLLWKNVRERRLAEIEAKEACDWLRAAGFPQYAQLYEDSQFP
INIVAVKNDHDFLEKDLVEPLCRRLNTLNKCASMKLDVNFQRKKGDDSDEEDLCISNKWTFQRTSRRWSR
VDDLYTLLPRGDRNGSPGGTGMRNTTSSESVLTDLSEPEVCSIHSESSGGSDSRSQPGQCCTDNPVMLDA
PLVSSSLPQPPRDVLNHPFHPKNEKPTRARAKSFLKRMETLRGKGAHGRHKGSGRTGGLVISGPMLQQEP
ESFKAMQCIQIPNGDLQNSPPPACRKGLPCSGKSSGESSPSEHSSSGVSTPCLKERKCHEANKRGGMYLE
DLDVLAGTALPDAGDQSRMHEFHSQENLVVHIPKDHKPGTFPKALSIESLSPTDSSNGVNWRTGSISLGR
EQVPGAREPRLMASCHRASRVSIYDNVPGSHLYASTGDLLDLEKDDLFPHLDDILQHVNGLQEVVDDWSK
DVLPELQTHDTLVGEPGLSTFPSPNQITLDFEGNSVSEGRTTPSDVERDVTSLNESEPPGVRDRRDSGVG
ASLTRPNRRLRWNSFQLSHQPRPAPASPHISSQTASQLSLLQRFSLLRLTAIMEKHSMSNKHGWTWSVPK
FMKRMKVPDYKDKAVFGVPLIVHVQRTGQPLPQSIQQALRYLRSNCLDQVGLFRKSGVKSRIHALRQMNE
NFPENVNYEDQSAYDVADMVKQFFRDLPEPLFTNKLSETFLHIYQYVSKEQRLQAVQAAILLLADENREV
LQTLLCFLNDVVNLVEENQMTPMNLAVCLAPSLFHLNLLKKESSPRVIQKKYATGKPDQKDLNENLAAAQ
GLAHMIMECDRLFEVPHELVAQSRNSYVEAEIHVPTLEELGTQLEESGATFHTYLNHLIQGLQKEAKEKF
KGWVTCSSTDNTDLAFKKVGDGNPLKLWKASVEVEAPPSVVLNRVLRERHLWDEDFVQWKVVETLDRQTE
IYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCGSGKSR
LTHICRIDLKGHSPEWYSKGFGHLCAAEVARIRNSFQPLIAEGPETKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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