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Report for CCDS91759.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91759.1 Public Homo sapiens 12 PXN 24 110 108 CCDS HistoryNCBI Gene:5829Re-query CCDS DB by CCDS ID:91759.1Re-query CCDS DB by GeneID:5829See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 91759.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000637617.2 ENSP00000489840.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000637617.2Link to Ensembl Protein Viewer:ENSP00000489840.1Re-query CCDS DB by Nucleotide ID:ENST00000637617Re-query CCDS DB by Protein ID:ENSP00000489840
Original member Current member NCBI NM_001385981.1 NP_001372910.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001385981.1Link to Protein Sequence:NP_001372910.1Re-query CCDS DB by Nucleotide ID:NM_001385981Re-query CCDS DB by Protein ID:NP_001372910Link to BLAST:NP_001372910.1

Chromosomal Locations for CCDS 91759.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 120212314 120212580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120213842 120213990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120214136 120214217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120214825 120214998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120215103 120215273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120215560 120215661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120216273 120216581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120216841 120217116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120219207 120220091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120221623 120221758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120222549 120222750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120222863 120222999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120223718 120223833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120224151 120224377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 120265617 120265629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3246 nt):
ATGGACGACCTCGACGCCCTGCTGGCGGACTTGGAGTCTACCACCTCCCACATCTCCAAACGGCCTGTGT
TCTTGTCGGAGGAGACCCCCTACTCATACCCAACTGGAAACCACACATACCAGGAGATTGCCGTGCCACC
CCCCGTCCCCCCACCCCCGTCCAGCGAGGCCCTCAATGGCACAATCCTTGACCCCTTAGACCAGTGGCAG
CCCAGCAGCTCCCGATTCATCCACCAGCAGCCTCAGTCCTCATCACCTGTGTACGGCTCCAGTGCCAAAA
CTTCCAGTGTCTCCAACCCTCAGGACAGTGTTGGCTCTCCGTGCTCCCGAGTGGGTGAGGAGGAGCACGT
CTACAGCTTCCCCAACAAGCAGAAATCAGCTGAGCCTTCACCCACCGTAATGAGCACGTCCCTGGGCAGC
AACCTTTCTGAACTCGACCGCCTGCTGCTGGAACTGAACGCTGTACAGCATAACCCGCCAGGCTTCCCTG
CAGATGAGGCCAACTCAAGCCCCCCGCTTCCTGGGGCCCTGAGCCCCCTCTATGGTGTCCCAGAGACTAA
CAGCCCCTTGGGAGGCAAAGCTGGGCCCCTGACGAAAGAGAAGCCTAAGCGGAATGGGGGCCGGGGCCTG
GAGGACGTGCGGCCCAGTGTGGAGAGTCTCTTGGATGAACTGGAGAGCTCCGTGCCCAGCCCCGTCCCTG
CCATCACTGTGAACCAGGGCGAGATGAGCAGCCCGCAGCGCGTCACCTCCACCCAACAGCAGACACGCAT
CTCGGCCTCCTCTGCCACCAGGGAGCTGGACGAGCTGATGGCTTCGCTGTCGGATTTCAAGACCAGCTCC
TCCACTGTGGCTCTGAGTGCCCCGGGGCTGTCCAGCTCTGCTCCGTCCTCATACTGCTCCCTTCCTCCTT
CTCCTCCTCCCATGCCATCTGTATTTCTGCCACCCACCACTATACCCTCCCCTCGAGGCCAGGGCCACAC
TCCGGAGTTCCCTTGTACTGAGCAGAGTGGACGAGGCCTTCTACCTCCTGTAGCCCCCAGCTGGCTTGAT
TTGGCTGGTCTTGGGGTGATGCCTGACACCTTCAACTCAAGGTCTCCCTCTGTGGAGGGTTCTCTGTGGG
CAGTGGGCACAGAGAGTCAGGGTCGAGATTGGAGGCACCTGCCGACCATCACAAGTGAGCTCTCTGGGGC
TCCCCGCTGCCACACTGTACCCTGTGCTGGGAGCACAGCTCTCCAAGAGCCTGGGGAGCCCCAGGGGCCA
CCAGCCAGCCCTTCGTGCCCAGAGGAGGCCTTGGCTGCCACATGGGAGCAGCCATGGGCTTCGGAGGTAT
TCGGGCCTGAGAGAATGCCCCCCTCTGGAGCTGCTCGAAGCTTCCAAGAAGTAACAGAGCCAGCTGTAGT
GGCAGTGGACCGGCAGGCCATCTTCCCAGATACCTGGACTCTCACGGAGGAACATGGCCTACAGCAGGAG
AGGCCAAGGCCAGAGCCAGGGAGGCTGGGAAGCAGCTCCCCTGCCTCAGTTACCACGGAGCAGCTAGGTG
CAAAGATGACCGAGAGGGGAAGTGTGGCCAGGCCAACCCAGGGACCTGAAACCCCAAGGAGCCCAGAGGG
CACCACGGAAGCTGCCACCCAGGACGGGAAGGAACAGCCAGAGCTTCCATGTGCCATGGCCATGGGCACA
CCCAGCACCACGGAGAGGATTTCCACCTCTGGCCAGATCCGATCTGTGATCAGGAGGAGCTGGGAGTCTG
GCCACGCACACCCCATGTCCCGGGAGCCCTCCCCTCGCCGCCGGCTGGACCCTGCCACCTTGAGCAGGAC
CCCATCCCAGGAACAGCTCATCGCGGAGCTGCAGGGGCGGCTGGGCATCCAGCCTGAGGCAGAGGAGCCG
GCGGAGGCGGCGGGGCCCTCTGCCCAGGACTGGCTGACCGAGGGCGTCATCATCACTGTGCAGCCACGTG
GGAAGCGGGCCGGGGGGCAGCTCGTAGAGAAGGTTGTCTTCCCTCCTGGCTCTCCCATTCCCCTGAGAAG
AACCATCTCTGTCCTGGCTTCTCCTTCTGTCCCTTTGCTCCAGCATCGCACAGACGCCGCGGCCAGCAGC
TCTTCTCCCCTGCCCAGCCTGCTCGCCTCCTCCCCCCTGGGGCCCTCAGCTTATACCTGTGGTTCTTCTG
GGGTCCAGAGTGCAGGGGAAGAGCCCCATGATGAGGGGGTGCAGGGCCCTGCCCTTCCCATTCCTGCACC
CCACACCATGAGGTCCGTGGGCTGCCAGACTGATGAGGACCCGCTCTTCCCCCCGATGCAGATCCAGGGC
CTGGAGCAAAGAGCGGATGGGGAGCGGTGCTGGGCGGCCGGCTGGCCTCGGGACGGCGGGCGGAGCAGCC
CCGGAGGGCAGGACGAGGGAGGGTTCATGGCCCAGGGGAAGACAGGGAGCAGCTCACCCCCTGGGGGGCC
CCCGAAGCCCGGGAGCCAGCTGGACAGCATGCTGGGGAGCCTGCAGTCTGACCTGAACAAGCTGGGGGTC
GCCACAGTCGCCAAAGGAGTCTGCGGGGCCTGCAAGAAGCCCATCGCCGGGCAGGTTGTGACCGCCATGG
GGAAGACGTGGCACCCCGAGCACTTCGTCTGCACCCACTGCCAGGAGGAGATCGGATCCCGGAACTTCTT
CGAGCGGGATGGACAGCCCTACTGTGAAAAGGACTACCACAACCTCTTCTCCCCGCGCTGCTACTACTGC
AACGGCCCCATCCTGGATAAAGTGGTGACAGCCCTTGACCGGACGTGGCACCCTGAACACTTCTTCTGTG
CACAGTGTGGAGCCTTCTTTGGTCCCGAAGGGTTCCACGAGAAGGACGGCAAGGCCTACTGTCGCAAGGA
CTACTTCGACATGTTCGCACCCAAGTGTGGCGGCTGCGCCCGGGCCATCCTGGAGAACTATATCTCAGCC
CTCAACACGCTGTGGCATCCTGAGTGCTTTGTGTGCCGGGAATGCTTCACGCCATTCGTGAACGGCAGCT
TCTTCGAGCACGACGGGCAGCCCTACTGTGAGGTGCACTACCACGAGCGGCGCGGCTCGCTGTGTTCTGG
CTGCCAGAAGCCCATCACCGGCCGCTGCATCACCGCCATGGCCAAGAAGTTCCACCCCGAGCACTTCGTC
TGTGCCTTCTGCCTCAAGCAGCTCAACAAGGGCACCTTCAAGGAGCAGAACGACAAGCCTTACTGTCAGA
ACTGCTTCCTCAAGCTCTTCTGCTAG

Translation (1081 aa):
MDDLDALLADLESTTSHISKRPVFLSEETPYSYPTGNHTYQEIAVPPPVPPPPSSEALNGTILDPLDQWQ
PSSSRFIHQQPQSSSPVYGSSAKTSSVSNPQDSVGSPCSRVGEEEHVYSFPNKQKSAEPSPTVMSTSLGS
NLSELDRLLLELNAVQHNPPGFPADEANSSPPLPGALSPLYGVPETNSPLGGKAGPLTKEKPKRNGGRGL
EDVRPSVESLLDELESSVPSPVPAITVNQGEMSSPQRVTSTQQQTRISASSATRELDELMASLSDFKTSS
STVALSAPGLSSSAPSSYCSLPPSPPPMPSVFLPPTTIPSPRGQGHTPEFPCTEQSGRGLLPPVAPSWLD
LAGLGVMPDTFNSRSPSVEGSLWAVGTESQGRDWRHLPTITSELSGAPRCHTVPCAGSTALQEPGEPQGP
PASPSCPEEALAATWEQPWASEVFGPERMPPSGAARSFQEVTEPAVVAVDRQAIFPDTWTLTEEHGLQQE
RPRPEPGRLGSSSPASVTTEQLGAKMTERGSVARPTQGPETPRSPEGTTEAATQDGKEQPELPCAMAMGT
PSTTERISTSGQIRSVIRRSWESGHAHPMSREPSPRRRLDPATLSRTPSQEQLIAELQGRLGIQPEAEEP
AEAAGPSAQDWLTEGVIITVQPRGKRAGGQLVEKVVFPPGSPIPLRRTISVLASPSVPLLQHRTDAAASS
SSPLPSLLASSPLGPSAYTCGSSGVQSAGEEPHDEGVQGPALPIPAPHTMRSVGCQTDEDPLFPPMQIQG
LEQRADGERCWAAGWPRDGGRSSPGGQDEGGFMAQGKTGSSSPPGGPPKPGSQLDSMLGSLQSDLNKLGV
ATVAKGVCGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSPRCYYC
NGPILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMFAPKCGGCARAILENYISA
LNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSLCSGCQKPITGRCITAMAKKFHPEHFV
CAFCLKQLNKGTFKEQNDKPYCQNCFLKLFC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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