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Report for CCDS91315.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91315.1 Public Homo sapiens 10 HPS1 24 110 108 CCDS HistoryNCBI Gene:3257Re-query CCDS DB by CCDS ID:91315.1Re-query CCDS DB by GeneID:3257See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91315.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000414009.2 ENSP00000392462.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000414009.2Link to Ensembl Protein Viewer:ENSP00000392462.2Re-query CCDS DB by Nucleotide ID:ENST00000414009Re-query CCDS DB by Protein ID:ENSP00000392462
Original member Current member EBI ENST00000699128.1 ENSP00000514147.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000699128.1Link to Ensembl Protein Viewer:ENSP00000514147.1Re-query CCDS DB by Nucleotide ID:ENST00000699128Re-query CCDS DB by Protein ID:ENSP00000514147
Original member Current member EBI ENST00000699129.1 ENSP00000514148.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000699129.1Link to Ensembl Protein Viewer:ENSP00000514148.1Re-query CCDS DB by Nucleotide ID:ENST00000699129Re-query CCDS DB by Protein ID:ENSP00000514148
Original member Current member NCBI NM_001322491.2 NP_001309420.1 Accepted alive Link to Nucleotide Sequence:NM_001322491.2Link to Protein Sequence:NP_001309420.1Re-query CCDS DB by Nucleotide ID:NM_001322491Re-query CCDS DB by Protein ID:NP_001309420Link to BLAST:NP_001309420.1

Chromosomal Locations for CCDS 91315.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 98429535 98429642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98430571 98430670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98431131 98431291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98433983 98434091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98435272 98435414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98435635 98435772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 98443124 98443240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (876 nt):
ATGAAGTGCGTCTTGGTGGCCACTGAGGGCGCAGAGGTCCTCTTCTACTGGACAGATCAGGAGTTTGAAG
AGAGTCTCCGGCTGAAGTTCGGGCAGTCAGAGAATGAGGAAGAAGAGCTCCCTGCCCTGGAGGACCAGCT
CAGCACCCTCCTAGCCCCGGTCATCATCTCCTCCATGACGATGCTGGAGAAGCTCTCGGACACCTACACC
TGCTTCTCCACGGAAAATGGCAACTTCCTGTATGTCCTTCACCTGTTTGGAGAATGCCTGTTCATTGCCA
TCAATGGTGACCACACCGAGAGCGAGGGGGACCTGCGGCGGAAGCTGTATGTGCTCAAGTACCTGTTTGA
AGTGCACTTTGGGCTGGTGACTGTGGACGGTCATCTTATCCGAAAGGAGCTGCGGCCCCCAGACCTGGCG
CAGCGTGTCCAGCTGTGGGAGCACTTCCAGAGCCTGCTGTGGACCTACAGCCGCCTGCGGGAGCAGGAGC
AGTGCTTCGCCGTGGAGGCCCTGGAGCGACTGATTCACCCCCAGCTCTGTGAGCTGTGCATAGAGGCGCT
GGAGCGGCACGTCATCCAGGCTGTCAACACCAGCCCCGAGCGGGGAGGCGAGGAGGCCCTGCATGCCTTC
CTGCTCGTGCACTCCAAGCTGCTGGCATTCTACTCTAGCCACAGTGCCAGCTCCCTGCGCCCGGCCGACC
TGCTTGCCCTCATCCTCCTGGTTCAGGACCTCTACCCCAGCGAGAGCACAGCAGAGGACGACATTCAGGA
GACAGACAGCTTCTCCCTCCCTGAGGAGTACTTCACACCAGCTCCTTCCCCTGGCGATCAGAGCTCAGGT
GAGGACCGGAGGAAAGCAGGAGGAAACAATAGCTAG

Translation (291 aa):
MKCVLVATEGAEVLFYWTDQEFEESLRLKFGQSENEEEELPALEDQLSTLLAPVIISSMTMLEKLSDTYT
CFSTENGNFLYVLHLFGECLFIAINGDHTESEGDLRRKLYVLKYLFEVHFGLVTVDGHLIRKELRPPDLA
QRVQLWEHFQSLLWTYSRLREQEQCFAVEALERLIHPQLCELCIEALERHVIQAVNTSPERGGEEALHAF
LLVHSKLLAFYSSHSASSLRPADLLALILLVQDLYPSESTAEDDIQETDSFSLPEEYFTPAPSPGDQSSG
EDRRKAGGNNS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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