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Report for CCDS91183.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91183.1 Public Homo sapiens 1 OPN3 24 110 108 CCDS HistoryNCBI Gene:23596Re-query CCDS DB by CCDS ID:91183.1Re-query CCDS DB by GeneID:23596See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91183.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000638160.1 ENSP00000490433.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000638160.1Link to Ensembl Protein Viewer:ENSP00000490433.1Re-query CCDS DB by Nucleotide ID:ENST00000638160Re-query CCDS DB by Protein ID:ENSP00000490433
Original member Current member NCBI NM_001381855.1 NP_001368784.1 Accepted alive Link to Nucleotide Sequence:NM_001381855.1Link to Protein Sequence:NP_001368784.1Re-query CCDS DB by Nucleotide ID:NM_001381855Re-query CCDS DB by Protein ID:NP_001368784Link to BLAST:NP_001368784.1

Chromosomal Locations for CCDS 91183.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 241635727 241635797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 241639882 241640254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (444 nt):
ATGTACTCGGGGAACCGCAGCGGCGGCCACGGCTACTGGGACGGCGGCGGGGCCGCGGGCGCTGAGGGGC
CGGCGCCGGCGGGGACACTGAGCCCCGCGCCCCTCTTCAGCCCCGGCACCTACGAGCGCCTGGCGCTGCT
GCTGGGCTCCATTGGGCTGCTGGGCGTCGGCAACAACCTGCTGGTGCTCGTCCTCTACTACAAGTTCCAG
CGGCTCCGCACTCCCACTCACCTCCTCCTGGTCAACATCAGCCTCAGCGACCTGCTGGTGTCCCTCTTCG
GGGTCACCTTTACCTTCGTGTCCTGCCTGAGGAACGGCTGGGTGTGGGACACCGTGGGCTGCGTGTGGGA
CGGGTTTAGCGGCAGCCTCTTCGCAGTTGTCACCAGACGCTGTTACTTCCTAAAATGGCGGACAATCTTC
CCACAGAGTTTGATGTGGTTATAA

Translation (147 aa):
MYSGNRSGGHGYWDGGGAAGAEGPAPAGTLSPAPLFSPGTYERLALLLGSIGLLGVGNNLLVLVLYYKFQ
RLRTPTHLLLVNISLSDLLVSLFGVTFTFVSCLRNGWVWDTVGCVWDGFSGSLFAVVTRRCYFLKWRTIF
PQSLMWL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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