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Report for CCDS91162.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91162.1 Public Homo sapiens 1 WDR26 24 110 108 CCDS HistoryNCBI Gene:80232Re-query CCDS DB by CCDS ID:91162.1Re-query CCDS DB by GeneID:80232See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Non-AUG initiation codon

Sequence IDs included in CCDS 91162.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000414423.9 ENSP00000408108.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000414423.9Link to Ensembl Protein Viewer:ENSP00000408108.4Re-query CCDS DB by Nucleotide ID:ENST00000414423Re-query CCDS DB by Protein ID:ENSP00000408108
Original member Current member NCBI NM_001379403.1 NP_001366332.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001379403.1Link to Protein Sequence:NP_001366332.1Re-query CCDS DB by Nucleotide ID:NM_001379403Re-query CCDS DB by Protein ID:NP_001366332Link to BLAST:NP_001366332.1

Chromosomal Locations for CCDS 91162.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 224389835 224389860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224393828 224394013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224398097 224398226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224398515 224398593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224398889 224399034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224400950 224401069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224404430 224404570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224411427 224411565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224418260 224418416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224419518 224419615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224424518 224424654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224431477 224431581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224431682 224431781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 224433684 224434405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. This works on the replacement symbol in the Translation Exceptions section also.

Translation Exceptions:
replace the symbol T (codon ACG) with M at amino acid position 1

Nucleotide Sequence (2286 nt):
ACGGCCTCTCTCGGCGAGGAAACTCTGGCCTCCGCTTCCTCCTCCTCCGACTCGGACACCGGCGGAGCCT
CCCCGCCCCCGCGGAAGAAACCCCGAGCCTCGGCGGCGGAGGGAGTAGGAGAGCCCGGGGCTTCGGCAGG
CAGAGCAGGCCTCTCCCCTCCGTCCTCGTCGTCCTCGTCCTCCTCCTCCTCCTCCTCCTCCGTGGTGGTA
GTGGTGGGACTTCCCCCGGCTGCTGCCCCTCCCGCCGCCGCTGCTGTCCCCCACCGAAGTAGCGGCCACA
GCCTGGTCAGCGGCAGCATCATGCAGGCCAATGGGGCAGGAGGAGGAGGAGGAGGTGGCGGCGGCGGCGG
TGGAGGAGGAGGGGGCGGCGGGGGCCAGGGACAGACCCCGGAACTCGCCTGCTTGTCGGCCCAGAACGGG
GAGTCGTCCCCCTCGTCGTCGTCGTCCGCGGGGGACCTGGCCCACGCCAATGGGCTCCTGCCTTCCGCCC
CCTCCGCCGCCAGCAACAATAGCAACAGCCTGAATGTCAATAACGGGGTTCCCGGCGGGGCGGCCGCCGC
ATCCTCAGCCACCGTCGCAGCTGCCTCCGCCACCACCGCCGCCTCCTCTTCCTTGGCCACCCCAGAACTG
GGCAGCAGCCTCAAGAAGAAGAAGCGGCTCTCCCAGTCAGATGAGGATGTCATTAGGCTAATAGGACAGC
ACTTGAATGGCTTAGGGCTCAACCAGACTGTTGATCTCCTCATGCAAGAGTCAGGATGTCGTTTAGAACA
TCCTTCTGCTACCAAATTCCGAAATCATGTCATGGAAGGAGACTGGGATAAGGCAGAAAATGACCTGAAT
GAACTAAAGCCTTTAGTGCATTCTCCTCATGCTATTGTGGTAAGAGGCGCACTTGAAATCTCTCAAACGT
TGTTGGGAATAATTGTGAGGATGAAGTTTTTGCTGCTGCAGCAGAAGTACCTAGAATACCTGGAGGATGG
CAAGGTCCTGGAGGCACTTCAAGTTCTACGCTGTGAATTGACGCCGCTGAAATACAATACAGAGCGCATT
CATGTTCTTAGTGGGTATCTGATGTGTAGCCATGCAGAAGACCTACGTGCAAAAGCAGAATGGGAAGGCA
AAGGGACAGCTTCCCGATCTAAACTATTGGATAAACTTCAGACCTATTTACCACCATCAGTGATGCTTCC
CCCACGGCGTTTACAGACTCTCCTGCGGCAGGCGGTGGAACTACAAAGGGATCGGTGCCTATATCACAAT
ACCAAACTTGATAATAATCTAGATTCTGTGTCTCTGCTTATAGACCATGTTTGTAGTAGGAGGCAGTTCC
CATGTTATACGCAGCAGATACTTACGGAGCATTGTAATGAAGTGTGGTTCTGTAAATTCTCTAATGATGG
CACTAAACTAGCAACAGGATCAAAAGATACAACAGTTATCATATGGCAAGTTGATCCGGATACACACCTG
CTAAAACTGCTTAAAACATTAGAAGGACATGCTTATGGCGTTTCTTATATTGCATGGAGTCCAGATGACA
ACTATCTTGTTGCTTGTGGCCCAGATGACTGCTCTGAGCTTTGGCTTTGGAATGTACAAACAGGAGAACT
AAGGACAAAAATGAGCCAGTCTCATGAAGACAGTTTGACAAGTGTGGCTTGGAATCCAGATGGGAAGCGC
TTTGTGACTGGAGGTCAGCGTGGGCAGTTCTATCAGTGTGACTTAGATGGTAATCTCCTTGACTCCTGGG
AAGGGGTAAGAGTGCAATGCCTTTGGTGCTTGAGTGATGGAAAGACTGTTCTGGCATCAGATACACACCA
GCGAATTCGGGGCTATAACTTCGAGGACCTTACAGATAGGAACATAGTACAAGAAGATCATCCTATTATG
TCTTTTACTATTTCAAAAAATGGCCGATTAGCTTTGTTAAATGTAGCAACTCAGGGAGTTCATTTATGGG
ACTTGCAAGACAGAGTTTTAGTAAGAAAGTATCAAGGTGTTACACAAGGGTTTTATACAATTCATTCATG
TTTTGGAGGCCATAATGAAGACTTCATCGCTAGTGGCAGTGAAGATCACAAGGTTTACATCTGGCACAAA
CGTAGTGAACTGCCAATTGCGGAGCTGACAGGGCACACACGTACAGTAAACTGTGTGAGCTGGAACCCAC
AGATTCCATCCATGATGGCCAGCGCCTCAGATGATGGCACTGTTAGAATATGGGGACCAGCACCTTTTAT
AGACCACCAGAATATTGAAGAGGAATGCAGTAGCATGGATAGTTGA

Translation (761 aa):
MASLGEETLASASSSSDSDTGGASPPPRKKPRASAAEGVGEPGASAGRAGLSPPSSSSSSSSSSSSSVVV
VVGLPPAAAPPAAAAVPHRSSGHSLVSGSIMQANGAGGGGGGGGGGGGGGGGGGGQGQTPELACLSAQNG
ESSPSSSSSAGDLAHANGLLPSAPSAASNNSNSLNVNNGVPGGAAAASSATVAAASATTAASSSLATPEL
GSSLKKKKRLSQSDEDVIRLIGQHLNGLGLNQTVDLLMQESGCRLEHPSATKFRNHVMEGDWDKAENDLN
ELKPLVHSPHAIVVRGALEISQTLLGIIVRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLKYNTERI
HVLSGYLMCSHAEDLRAKAEWEGKGTASRSKLLDKLQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHN
TKLDNNLDSVSLLIDHVCSRRQFPCYTQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHL
LKLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKR
FVTGGQRGQFYQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFEDLTDRNIVQEDHPIM
SFTISKNGRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHK
RSELPIAELTGHTRTVNCVSWNPQIPSMMASASDDGTVRIWGPAPFIDHQNIEEECSSMDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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