NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS90975.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90975.1 Public Homo sapiens 1 LRRC7 24 110 108 CCDS HistoryNCBI Gene:57554Re-query CCDS DB by CCDS ID:90975.1Re-query CCDS DB by GeneID:57554See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90975.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000651989.2 ENSP00000498937.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000651989.2Link to Ensembl Protein Viewer:ENSP00000498937.2Re-query CCDS DB by Nucleotide ID:ENST00000651989Re-query CCDS DB by Protein ID:ENSP00000498937
Original member Current member NCBI NM_001370785.2 NP_001357714.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001370785.2Link to Protein Sequence:NP_001357714.1Re-query CCDS DB by Nucleotide ID:NM_001370785Re-query CCDS DB by Protein ID:NP_001357714Link to BLAST:NP_001357714.1

Chromosomal Locations for CCDS 90975.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 69568640 69568641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 69678381 69678478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 69760191 69760393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 69792043 69792160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 69825748 69825826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 69834780 69834869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 69838227 69838283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 69931507 69931570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 69980379 69980453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 69986242 69986386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 69994561 69994633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70011797 70011926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70012974 70013089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70016465 70016534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70018719 70018818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70021005 70021129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70023126 70023374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70028171 70028371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70036121 70036232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70036444 70036624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70038113 70039793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70043954 70044094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70053026 70053145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70076077 70076298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70089727 70089819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70107752 70107826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 70121780 70121887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4728 nt):
ATGATGGAGAACCTAATAAGGGGAAGGAATCCCCCGCAATACCAGAGAAGTCCTTGTAAAGAGGTTCGTG
CAGCACTTCGGAAGAGGCCTGAAGAGGAGTTGCAGTGCCTGGAGATGACCACCAAACGGAAAATCATCGG
CCGTCTGGTGCCATGCCGATGTTTCCGAGGTGAAGAAGAAATCATCTCAGTTTTAGATTACTCCCACTGC
AGTCTTCAGCAGGTGCCAAAGGAGGTCTTTAACTTCGAACGAACATTAGAGGAGCTTTATCTAGATGCCA
ATCAAATTGAAGAACTACCCAAGCAATTGTTCAACTGTCAAGCTCTACGAAAACTAAGTATTCCTGATAA
CGACCTTTCAAATCTGCCAACCACTATTGCTAGTTTAGTTAATCTTAAAGAACTCGACATCAGTAAAAAT
GGTGTACAAGAATTTCCAGAAAACATAAAGTGCTGTAAGTGTTTAACAATTATTGAAGCCAGTGTCAATC
CCATTTCTAAACTACCTGATGGCTTCACACAGCTCCTAAACCTGACCCAGCTCTACCTGAATGACGCCTT
TCTTGAATTTCTTCCAGCCAATTTTGGAAGACTTGTCAAATTGCGGATCTTGGAGTTAAGAGAAAATCAC
TTGAAAACTCTACCAAAGTCAATGCACAAACTGGCCCAGTTGGAAAGACTTGACCTAGGCAATAATGAAT
TCGGTGAGCTGCCTGAAGTTCTGGATCAAATACAAAATTTGAGGGAGTTATGGATGGATAATAATGCATT
ACAAGTGTTACCTGGGTCTATAGGGAAGTTAAAGATGTTGGTATACCTGGATATGTCAAAAAACAGAATA
GAAACAGTTGACATGGACATTTCTGGATGTGAAGCCCTTGAGGACCTCTTATTGTCATCCAATATGTTGC
AACAATTGCCTGATTCTATAGGACTTTTGAAAAAACTAACAACTCTAAAAGTAGATGACAATCAACTTAC
AATGCTACCCAATACAATTGGAAATTTATCTTTATTAGAAGAATTTGACTGTAGCTGTAATGAACTGGAG
TCACTACCTTCTACTATTGGCTACCTTCATAGTCTTCGGACATTAGCAGTTGATGAGAATTTCCTTCCAG
AATTACCCAGAGAAATTGGAAGTTGTAAGAATGTAACAGTCATGTCTCTACGCTCCAACAAATTAGAATT
TCTTCCTGAAGAGATTGGACAGATGCAGAAACTAAGAGTCCTAAATTTGAGTGACAACAGATTGAAGAAT
TTACCATTCTCATTTACCAAACTTAAAGAGCTTGCAGCTTTGTGGCTTTCTGACAATCAGTCCAAAGCCC
TTATCCCTTTACAAACAGAAGCCCATCCAGAAACAAAGCAAAGAGTATTGACTAACTACATGTTTCCCCA
GCAGCCTCGTGGTGATGAAGATTTCCAGTCAGACAGTGACAGCTTTAACCCTACACTGTGGGAAGAGCAG
AGACAACAACGCATGACTGTTGCCTTTGAATTTGAAGACAAAAAAGAAGATGACGAAAATGCTGGGAAAG
TTAAGGATCTCTCCTGCCAAGCCCCCTGGGAAAGGGGCCAGCGTGGGATTACTCTCCAACCTGCCAGACT
GTCTGGCGATTGCTGCACACCATGGGCCAGGTGTGATCAGCAGATCCAAGATATGCCCGTCCCCCAGAAT
GACCCACAGCTGGCATGGGGTTGTATAAGTGGCCTCCAGCAGGAAAGGAGCATGTGTACTCCATTGCCAG
TTGCAGCACAATCCACCACTCTTCCCTCTCTAAGTGGCAGACAGGTTGAAATAAACCTAAAACGATATCC
AACTCCTTACCCAGAGGATTTAAAGAATATGGTAAAATCTGTTCAAAATTTGGTGGGTAAGCCAAGCCAT
GGAGTGCGTGTTGAGAATTCAAATCCAACTGCTAACACGGAGCAAACTGTGAAAGAAAAATATGAACACA
AGTGGCCGGTAGCCCCAAAGGAGATTACAGTGGAGGATTCTTTTGTTCATCCAGCTAATGAAATGAGGAT
TGGGGAACTTCACCCTTCATTAGCTGAGACCCCTCTGTACCCACCCAAACTTGTTCTGCTAGGGAAGGAC
AAAAAAGAATCAACTGATGAGTCTGAAGTTGACAAAACTCACTGTCTGAATAACAGTGTTTCCTCAGGCA
CTTACTCAGACTACTCGCCTTCCCAGGCTTCCTCAGGATCCTCTAATACCCGGGTTAAAGTGGGGTCCTT
GCAGACAACAGCTAAAGATGCAGTACATAATTCTTTGTGGGGTAACAGGATTGCACCATCTTTCCCACAG
CCTCTTGATTCAAAGCCATTACTCAGCCAGCGGGAGGCTGTTCCCCCAGGCAATATACCACAGCGTCCTG
ACCGGCTGCCCATGAGTGATACTTTCACTGACAACTGGACTGATGGCTCGCATTATGACAACACAGGGTT
TGTTGCTGAGGAAACCACAGCCGAGAATGCCAACAGTAATCCTCTCTTAAGTTCGAAATCTAGAAGCACA
TCTTCGCATGGACGCAGGCCTTTGATCAGGCAAGACAGGATTGTTGGTGTTCCCCTGGAACTCGAGCAGT
CTACACACAGACACACACCAGAAACAGAAGTGCCTCCTTCCAATCCTTGGCAGAATTGGACCAGAACCCC
TAGTCCGTTTGAAGACAGGACCGCTTTTCCTTCCAAATTAGAGACAACCCCCACTACCAGCCCATTGCCT
GAAAGGAAAGAACATATAAAGGAATCTACTGAAATACCTAGTCCTTTTTCTCCAGGCGTACCATGGGAGT
ATCATGATTCCAATCCCAACAGGAGTCTTAGTAATGTCTTTTCTCAAATCCACTGCCGCCCGGAATCTTC
TAAAGGTGTTATTTCAATTAGCAAAAGCACAGAGAGGCTTTCCCCCCTAATGAAAGATATCAAGTCTAAT
AAATTCAAAAAGTCACAGAGTATCGATGAGATTGACATTGGTACATATAAGGTGTATAACATACCATTAG
AAAACTATGCTTCTGGGAGTGATCACTTAGGAAGCCACGAACGACCGGATAAGATGCTGGGACCAGAGCA
TGGTATGTCCAGTATGTCTCGAAGCCAGTCAGTCCCAATGCTGGATGATGAGATGCTCACCTACGGAAGT
AGTAAGGGGCCACAACAACAAAAAGCTTCTATGACAAAAAAAGTCTATCAGTTTGACCAAAGCTTCAATC
CTCAAGGATCAGTGGAAGTGAAAGCCGAAAAGAGGATACCACCCCCTTTTCAACACAATCCCGAGTACGT
GCAACAGGCCAGCAAAAACATCGCCAAGGATTTGATTAGTCCTAGAGCTTACAGAGGATACCCACCGATG
GAGCAAATGTTTTCATTTTCTCAGCCATCTGTGAATGAGGATGCTGTGGTGAATGCCCAGTTCGCAAGCC
AAGGGGCCAGGGCGGGCTTCCTGAGAAGGGCCGACTCCCTGGTGAGCGCCACAGAAATGGCCATGTTTAG
AAGGGTCAATGAGCCTCATGAGCTGCCCCCAACTGATAGGTACGGCAGACCCCCATATAGGGGAGGGCTG
GATCGCCAAAGCAGCGTTACAGTGACTGAGTCCCAGTTCCTGAAAAGGAATGGCAGGTATGAAGATGAAC
ACCCTTCATATCAAGAAGTGAAAGCTCAGGCGGGAAGTTTTCCGGTTAAAAACCTTACCCAAAGGAGGCC
ATTGTCTGCGAGAAGCTACAGTACAGAGAGTTACGGTGCCTCCCAAACCAGGCCAGTTTCAGCTAGGCCT
ACTATGGCAGCTCTTTTGGAAAAAATACCATCTGACTATAACTTGGGTAACTATGGTGACAAGCCATCAG
ATAACAGTGATTTAAAGACGAGGCCTACTCCTGTGAAGGGAGAGGAGAGCTGTGGTAAAATGCCTGCAGA
CTGGAGACAACAGCTGCTTAGACATATAGAAGCTAGACGGTTAGACAGGAATGCTGCTTACAAACACAAT
ACAGTTAACCTTGGCATGCTGCCCTATGGAGGTATTTCAGCAATGCATGCAGGCAGAAGCATGACTTTAA
ACTTGCAGACTAAGTCTAAATTTGATCATCAAGAACTACCTCTTCAGAAAACCCCGTCCCAGCAAAGCAA
CATTTTAGACAATGGACAAGAAGATGTATCTCCTAGTGGCCAATGGAATCCTTATCCACTTGGGAGGCGG
GATGTACCTCCGGACACCATTACTAAGAAGGCAGGCAGCCACATCCAGACGTTGATGGGGTCCCAAAGCC
TTCAGCATCGCAGCCGGGAGCAGCAGCCGTATGAAGGAAATATAAACAAAGTGACCATCCAGCAATTTCA
GTCACCATTGCCTATTCAGATCCCCTCTTCACAGGCCACCCGGGGACCTCAGCCTGGACGGTGCTTAATT
CAAACTAAAGGGCAAAGGAGTATGGATGGATATCCAGAGCAGTTTTGTGTGAGAATAGAAAAGAATCCTG
GCCTTGGATTTAGTATCAGTGGTGGAATTAGTGGACAAGGAAATCCATTCAAACCTTCTGACAAGGGTAT
CTTTGTTACTAGGGTTCAGCCTGATGGGCCAGCATCAAACCTACTGCAGCCTGGTGATAAGATCCTTCAG
GCAAATGGACACAGTTTTGTACATATGGAACATGAAAAAGCTGTATTACTACTGAAGAGTTTCCAGAACA
CAGTAGACCTAGTTATTCAACGTGAGCTTACTGTCTAA

Translation (1575 aa):
MMENLIRGRNPPQYQRSPCKEVRAALRKRPEEELQCLEMTTKRKIIGRLVPCRCFRGEEEIISVLDYSHC
SLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKN
GVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENH
LKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRI
ETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELE
SLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKN
LPFSFTKLKELAALWLSDNQSKALIPLQTEAHPETKQRVLTNYMFPQQPRGDEDFQSDSDSFNPTLWEEQ
RQQRMTVAFEFEDKKEDDENAGKVKDLSCQAPWERGQRGITLQPARLSGDCCTPWARCDQQIQDMPVPQN
DPQLAWGCISGLQQERSMCTPLPVAAQSTTLPSLSGRQVEINLKRYPTPYPEDLKNMVKSVQNLVGKPSH
GVRVENSNPTANTEQTVKEKYEHKWPVAPKEITVEDSFVHPANEMRIGELHPSLAETPLYPPKLVLLGKD
KKESTDESEVDKTHCLNNSVSSGTYSDYSPSQASSGSSNTRVKVGSLQTTAKDAVHNSLWGNRIAPSFPQ
PLDSKPLLSQREAVPPGNIPQRPDRLPMSDTFTDNWTDGSHYDNTGFVAEETTAENANSNPLLSSKSRST
SSHGRRPLIRQDRIVGVPLELEQSTHRHTPETEVPPSNPWQNWTRTPSPFEDRTAFPSKLETTPTTSPLP
ERKEHIKESTEIPSPFSPGVPWEYHDSNPNRSLSNVFSQIHCRPESSKGVISISKSTERLSPLMKDIKSN
KFKKSQSIDEIDIGTYKVYNIPLENYASGSDHLGSHERPDKMLGPEHGMSSMSRSQSVPMLDDEMLTYGS
SKGPQQQKASMTKKVYQFDQSFNPQGSVEVKAEKRIPPPFQHNPEYVQQASKNIAKDLISPRAYRGYPPM
EQMFSFSQPSVNEDAVVNAQFASQGARAGFLRRADSLVSATEMAMFRRVNEPHELPPTDRYGRPPYRGGL
DRQSSVTVTESQFLKRNGRYEDEHPSYQEVKAQAGSFPVKNLTQRRPLSARSYSTESYGASQTRPVSARP
TMAALLEKIPSDYNLGNYGDKPSDNSDLKTRPTPVKGEESCGKMPADWRQQLLRHIEARRLDRNAAYKHN
TVNLGMLPYGGISAMHAGRSMTLNLQTKSKFDHQELPLQKTPSQQSNILDNGQEDVSPSGQWNPYPLGRR
DVPPDTITKKAGSHIQTLMGSQSLQHRSREQQPYEGNINKVTIQQFQSPLPIQIPSSQATRGPQPGRCLI
QTKGQRSMDGYPEQFCVRIEKNPGLGFSISGGISGQGNPFKPSDKGIFVTRVQPDGPASNLLQPGDKILQ
ANGHSFVHMEHEKAVLLLKSFQNTVDLVIQRELTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH