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Report for CCDS90906.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90906.1 Public Homo sapiens 1 TMEM234 24 110 108 CCDS HistoryNCBI Gene:56063Re-query CCDS DB by CCDS ID:90906.1Re-query CCDS DB by GeneID:56063See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90906.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344461.7 ENSP00000344021.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000344461.7Link to Ensembl Protein Viewer:ENSP00000344021.3Re-query CCDS DB by Nucleotide ID:ENST00000344461Re-query CCDS DB by Protein ID:ENSP00000344021
Original member Current member EBI ENST00000461402.5 ENSP00000433020.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000461402.5Link to Ensembl Protein Viewer:ENSP00000433020.1Re-query CCDS DB by Nucleotide ID:ENST00000461402Re-query CCDS DB by Protein ID:ENSP00000433020
Original member Current member EBI ENST00000489170.5 ENSP00000436631.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000489170.5Link to Ensembl Protein Viewer:ENSP00000436631.1Re-query CCDS DB by Nucleotide ID:ENST00000489170Re-query CCDS DB by Protein ID:ENSP00000436631
Original member Current member NCBI NM_001366191.2 NP_001353120.1 Accepted alive Link to Nucleotide Sequence:NM_001366191.2Link to Protein Sequence:NP_001353120.1Re-query CCDS DB by Nucleotide ID:NM_001366191Re-query CCDS DB by Protein ID:NP_001353120Link to BLAST:NP_001353120.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001353120.1 164 Q8WY98-1 164 100% 0 0

Chromosomal Locations for CCDS 90906.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 32216410 32216517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32216889 32216947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32217259 32217351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32221131 32221197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32221867 32222018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32222307 32222322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (495 nt):
ATGGCGGCGTCTCTGGGGCAGGTGTTGGCTCTGGTGCTGGTGGCCGCTCTGTGGGGTGGCACGCAGCCGC
TGCTGAAGCGGGCCTCCGCCGGCCTGCAGCGGGTTCATGAGCCGACCTGGGCCCAGCAGTTGCTACAGGA
GATGAAGACCCTCTTCTTGAATACTGAGTACCTGATGCCCTTTCTCCTCAACCAGTGTGGATCCCTTCTC
TATTACCTCACCTTGGCATCGACAGATCTGACCCTGGCTGTGCCCATCTGTAACTCTCTGGCTATCATCT
TCACACTGATTGTTGGGAAGGCCCTTGGAGAAGATATTGGTGGAAAACGAGCAGTTGCTGGCATGGTGCT
CACCGTGATAGGAATTTCACTCTGCATCACAAGCTCAGTTCCATGGACTGCAGAACTCCAGCTGCATGGA
AAGGGCCAGCTGCAGACTTTGAGCCAGAAATGCAAACGGGAGGCCTCTGGGACTCAGTCAGAGCGCTTTG
GCTGA

Translation (164 aa):
MAASLGQVLALVLVAALWGGTQPLLKRASAGLQRVHEPTWAQQLLQEMKTLFLNTEYLMPFLLNQCGSLL
YYLTLASTDLTLAVPICNSLAIIFTLIVGKALGEDIGGKRAVAGMVLTVIGISLCITSSVPWTAELQLHG
KGQLQTLSQKCKREASGTQSERFG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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