NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS90691.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90691.1 Public Mus musculus 9 Zdhhc3 23 108 98 CCDS HistoryNCBI Gene:69035Re-query CCDS DB by CCDS ID:90691.1Re-query CCDS DB by GeneID:69035See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90691.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000238520.1 ENSMUSP00000158842.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000238520.1Link to Ensembl Protein Viewer:ENSMUSP00000158842.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000238520Re-query CCDS DB by Protein ID:ENSMUSP00000158842
Current member NCBI NM_001372538.1 NP_001359467.1 Accepted alive Link to Nucleotide Sequence:NM_001372538.1Link to Protein Sequence:NP_001359467.1Re-query CCDS DB by Nucleotide ID:NM_001372538Re-query CCDS DB by Protein ID:NP_001359467Link to BLAST:NP_001359467.1

Chromosomal Locations for CCDS 90691.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 123070361 123070618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 123080351 123080481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 123083545 123083626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 123084214 123084310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 123089032 123089156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 123100263 123100568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (999 nt):
ATGATGCTTATCCCCACCCATCACTTCCGAGACATTGAGCGGAAACCAGAGTACCTCCAGCCAGAGAAGT
GTGCCCCACCTCCCTTCCCTGGTCCTGCGGGAGCCATGTGGTTTATCCGAGATGGCTGTGGCATTGCTTG
TGCCATTGTCACCTGGTTTCTGGTCCTCTATGCGGAGTTTGTAGTCCTCTTTGTCATGCTGGTTCCATCC
CGAGACTACGCGTACAGCATCATCAACGGAATTGTGTTCAACCTGCTGGCCTTCTTGGCCCTGGCCTCCC
ACTGCCGGGCCATGCTGACGGACCCCGGGGCAGTGCCCAAAGGAAATGCCACTAAAGAGTTCATCGAGAG
CCTTCAGCTGAAGCCTGGGCAGGTGGTGTACAAGTGTCCCAAGTGCTGCAGCATCAAGCCCGACCGGGCA
CACCACTGCAGTGTTTGTAAGCGGTGCATTCGCAAGATGGATCACCACTGTCCTTGGGTCAACAACTGTG
TCGGCGAGAACAACCAGAAGTACTTTGTCCTATTCACAATGTACATAGCTCTCATTTCCTTGCACGCCCT
CATCATGGTGGGATTCCACTTCCTGCATTGCTTTGAAGAAGACTGGACAAAGTGCAGCTCCTTCTCGCCG
CCCACCACAGTCATCCTGCTCATCCTGCTGTGCTTTGAGGCCCTGCTCTTCCTCATTTTCACATCAGTGA
TGTTTGGGACCCAAGTACACTCCATCTGCACAGATGAGACGGGTATTGAACGCCTCCAACGAACAAAACA
GCCCAGGGAGCAGTCGGGCAGCTGGAAGTCGGTCCAGGAGGCTTTTGGTGGGAACTTTTCCCTGAACTGG
TTCAACCCTTTCACCAGACCTTGTCAACCAGAGACACCCATTGATAAGGGCTTGGTACGTCAAGTGTCAT
CTCTGTCAGACGTGGACAACATGGAAACAGCTGAGAGCCAATTGGAGGCGACAAAAGACAGGGACTCTGT
GGAGGTGCTGGATGAATAG

Translation (332 aa):
MMLIPTHHFRDIERKPEYLQPEKCAPPPFPGPAGAMWFIRDGCGIACAIVTWFLVLYAEFVVLFVMLVPS
RDYAYSIINGIVFNLLAFLALASHCRAMLTDPGAVPKGNATKEFIESLQLKPGQVVYKCPKCCSIKPDRA
HHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHALIMVGFHFLHCFEEDWTKCSSFSP
PTTVILLILLCFEALLFLIFTSVMFGTQVHSICTDETGIERLQRTKQPREQSGSWKSVQEAFGGNFSLNW
FNPFTRPCQPETPIDKGLVRQVSSLSDVDNMETAESQLEATKDRDSVEVLDE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH