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Report for CCDS90536.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90536.1 Public Mus musculus 9 Zfp202 23 108 98 CCDS HistoryNCBI Gene:80902Re-query CCDS DB by CCDS ID:90536.1Re-query CCDS DB by GeneID:80902See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90536.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000168832.1 ENSMUSP00000132131.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000168832.1Link to Ensembl Protein Viewer:ENSMUSP00000132131.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000168832Re-query CCDS DB by Protein ID:ENSMUSP00000132131
Original member Current member NCBI NM_001359464.1 NP_001346393.1 Accepted alive Link to Nucleotide Sequence:NM_001359464.1Link to Protein Sequence:NP_001346393.1Re-query CCDS DB by Nucleotide ID:NM_001359464Re-query CCDS DB by Protein ID:NP_001346393Link to BLAST:NP_001346393.1

Chromosomal Locations for CCDS 90536.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 40207293 40207694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40208305 40208515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40208878 40208966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40209767 40209896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 40210896 40210897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (834 nt):
ATGGCAACAGCCTTGGAGCCAGAGGACCAAGATCTTTGGGAAGAAGAAGGAGTTCTGATGGTGAAACTGG
AGGATGATTTCACGTGCGGGCCAGAATCCGCCTTGGAGGGCGATGATCCTGTACTGGAGACCTCTCACCA
GAACTTCCGACGCTTTCGATACCAGGAAGCATCAAGCCCTCGAGAAGCTCTCATCAGACTTCGAGAGCTT
TGTCATCAGTGGCTGAGGCCAGAGAGGAGAACTAAGGAGCAGATTCTTGAGCTGCTCGTGTTGGAGCAGT
TCCTCACTGTCCTGCCTGGAGAACTGCAGAGCTGGGTGCGAGGCCAGCGGCCCGAGAGTGGCGAGGAGGC
AGTGACGCTGGTGGAGGGTTTGCAGAAACAACCCAGGAGACCAAGGCGGTGGGTAACCGTCCATGTTCAG
GGCCAGGAAGTCCTGTCAGAGGAGACCCTACACCTAGGGCTGGAGCCGGAGTCCTCCAGTGAGCAACAAG
ATCCAACACAGACCTTGACCACTGAGCAGCCCCATGAGGAAGCCCTCCGAAGCCCAGATCTGGGGACACA
GGAACAGGAGACCTTGCAGCATGACGAGGAGCACCTGCCCCTGCCGGAATGTGAGGTTCCAGTGTCCCAG
GATGTAGACCTTCCCACAGAACAAGGGTCTGGACACCCAGAGATGGTTGCTCTTCTCACTGCTCTCTCTC
AGGGACTGGTCACATTCAAGGATGTGGCTCTGTGCTTCTCACAGGATCAGTGGAGTGATCTGGATCCAAC
ACAAAAAGAATTCTATGGAGAGTATGTCTTGGAAGAAGACTGTGGAATTGTGGTCTCTCTGTGA

Translation (277 aa):
MATALEPEDQDLWEEEGVLMVKLEDDFTCGPESALEGDDPVLETSHQNFRRFRYQEASSPREALIRLREL
CHQWLRPERRTKEQILELLVLEQFLTVLPGELQSWVRGQRPESGEEAVTLVEGLQKQPRRPRRWVTVHVQ
GQEVLSEETLHLGLEPESSSEQQDPTQTLTTEQPHEEALRSPDLGTQEQETLQHDEEHLPLPECEVPVSQ
DVDLPTEQGSGHPEMVALLTALSQGLVTFKDVALCFSQDQWSDLDPTQKEFYGEYVLEEDCGIVVSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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