CCDS Report for Consensus CDS

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Report for CCDS90492.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
90492.1	Public	Mus musculus	9	Dync2h1	23	108	98

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90492.1

Original	Current	Source	Nucleotide ID	Protein ID	Status in CCDS	Seq. Status	Links
		EBI	ENSMUST00000139115.1	ENSMUSP00000120322.1	Accepted	alive
		NCBI	NM_001364519.1	NP_001351448.1	Accepted	alive

Chromosomal Locations for CCDS 90492.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)

Genome Browser links:

Chromosome	Start	Stop
9	7149608	7149656
9	7155081	7155208
9	7157552	7157780
9	7157893	7158032
9	7158829	7158927
9	7159481	7159633
9	7160154	7160249
9	7162731	7162926
9	7165599	7165774
9	7167117	7167241
9	7168254	7168365
9	7168459	7168572
9	7168678	7168812
9	7169477	7169709
9	7170862	7171006
9	7172803	7172921
9	7174740	7174875
9	7175242	7175412
9	7176763	7176957

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2751 nt):
ATGGCGGGAAGCCTCGGAGATGTCCGCAAACTCTTTCTTTTTACGACCACCCAGAATTACTTCGGGCTGA GACCGGAGCTCTGGGATCAGCCTCCGTTGAGCAACTGCCCGGAGGTGAACAACTTCTTGGACGACGGGAA CCAGATGCTACTTCGGGTGCAGCGGTCCGAAGCTGGGCTGGCCTTTTCCAACACGATTGATTTTGATGAC GCAAAAGACAAAGTGCTGGTGTTTTTCAAGCTCCGACCAGAAGTAATTACAGATGGCAATCTGCATAACA ACATTCTGGTTTCTTCTATGCTGGAATCACCTATCAACTCCCTTTACCAAGCAGTACGACAGGTGTTTGC ACCCATGTTGCTGAAGGACCAGGAATGGAGCAGAAACTTTGATCCTAAACTTCAGAATCTTTTGAGTGAA CTAGAAGCTGGATTGGGTATAGTCCTACGAAAATCAGATACTAACTTACCCAAGCTGAAACTTAAGGAAG ACGATACTAGAGGTATTCTCACACCAAGTGATGAGTTCCAGTTTTGGATAGAACAAGCTCATCGTGGAAG CAAACAGATTAGTAAAGAAAGAGCCAGTTATTTTAAGGAATTATTTGAAACAATTTCAAGGGAATTTTAT AACTTGGACAGTCTGTCCTTGCTAGAAGTTGTTGACTTGGTGGAGACAACTCGGGATGTTGTAGATGATG TGTGGCGACAGACAGAGCATGATCATTACCCTGAGTCACGTATGCTGCATCTCCTGGATGTCATAGGTGG TTCATTTGGAAGGTTTGTTCAGAAAAAATTAGGAAGCTTGAAACTGTGGGAAGATCCTTATTATCTCGTG AAAGAAAACCTTAAAGCTGGCATTTCAATTTGTGAACAATGGGTGATAGTCTGCAGTCACCTCACAGGTC AGGTGTGGCAGCGCTATGTCCCTCATCCATGGAAAAGTGGAAAGTATTTCCCAGAAACTCTTGACAAACT GGGCAAACGGCTAGAGGAGGTCTTGGCTATTCGAACAATTCATGAGAAGCTCTTGTACTTTTTACCTGCC AGTGAGGAGAGAATTGTATGCCTGTCTCGGGTATTTGAGCCTTTCACTGGTGTGAACCCCGTGCAGTACA ATCCTTATACTGAGCCTTTATGGAAAGCTGCAGTGTCTCAGTATGAAAAGATCATTGCACCTGCAGAACA GAAAATAGCAGGGAAATTAAAGAATTATATTTCAGAAATTCAAGATAGTCCACAGCAGCTTCTCCAAGCA TTTCTAAAATACAAAGAATTGGTGAAGCGTCCCACTATAAGCAAAGAACTGATGTTAGAGAGAGAGACTT TACTGGCAAGACTTGGGGATTCAGCTAAAGATTTTCGATTGGACTTTGAGAATCGATGCCGAGGAATTCC TGGTGATCCATCTGGACCACTTTCTGGCAAAAATCTTTCAGAAGTTGTGAATAATATTGTTTGGGTTCGT CAGTTGGAATTGAAGGTAGACGATACTATCAAGATAGCAGAAGCTCTTTTGTCTGACTTGTCAGGATTTC GATCTTTTCATCGGAGTGCTGAAGATCTCTTGGACCAGTTCAAGCTCTATGAACAGGAACAGTTTGATGA CTGGTCAAGAGAAGTCCAGTCAGGGTTGTCTGACTCCAGGTCAGGTCTGTGTATTGAGGCTAACAGCCGA ATAATGGAATTGGATCCTAATGATGGGGCATTAAAAGTGCATTATTCTGATCGCCTGGTGATTCTTCTGA GAGAAGTCCGTCAGCTTTCTGCCCTGGGCTTTGTCATTCCTGCAAAAATACAGCAGGTTGCAAATGTTGC TCAGAAGTTCTGCAAGCAAGCCATCATTCTTAAGCAAGTGGCACATTTTTACAATTCCATTGATCAACAG ATGATTCAGAGTCAGAGGCCAATGATGCTGCAGTCTGCCTTAGCATTTGAACAGATAATTAAAAATTCAA AAGCAGGGAGTGGAGGCAAGTCACAGATTACTTGGGACAACCCTAAAGAACTAGAAGGCTACATCCAGAA ACTACAAAATGCTGCTGAGCGACTTGCCACAGAGAATAGAAGACTGAGAAAGTGGCACACTACATTTTGT GAAAAGGTTGTCATTCTTATGAATATTGATCTGCTTCGGCAGCAGCAGCGTTGGAAGGATGGACTGCAGG AACTGAGAACTGGCTTAGCGACTGTGGCAGCGCAGGGCTTCCAAGCCAGTGACATGCGTGCGTGGCGGCA GCACTGGAACCACCAGCTTTACAAGGCGCTGGAGCACCAGTATCAAGTGGGTCTGGAGGCGCTCAACGAG AACCTGCCGGAGATCAACGTAGACTTAACCTACAAACAGGGAAGGTTACAGTTTCGGCCTCCTTTTGAAG AAATCCGGGCTAAATATTACAGAGAAATGAAGAGGTTCATCGGAATTCCCAATCAGTTTAAGGGCGTGGG TGAGGCTGGAGATGAATCAATATTTTCTGTCATGATTGATAGAAATGCAAGTGGATTTCTGACTATTTAC AGCAAAGCAGAAGATCTGTTTAGAAGACTGTCAGCAGTTTTGCATCAACATAAGGAATGGGTTGTGATTG GACAGGTTGACATGGAAGCTCTGGTTGAAAAGAATCTTTCTACTGTGCATGATTGGGAGAAAAATTTTAA AGCATTGAAAATAAAAGGGAAAGAAGTTGAACGGCTTCCCAGTTCAGGGTTTCTCTGTGTAGCCTTGGCT GTCCTGGAGTTCACTCTGTAA
Translation (916 aa):
MAGSLGDVRKLFLFTTTQNYFGLRPELWDQPPLSNCPEVNNFLDDGNQMLLRVQRSEAGLAFSNTIDFDD AKDKVLVFFKLRPEVITDGNLHNNILVSSMLESPINSLYQAVRQVFAPMLLKDQEWSRNFDPKLQNLLSE LEAGLGIVLRKSDTNLPKLKLKEDDTRGILTPSDEFQFWIEQAHRGSKQISKERASYFKELFETISREFY NLDSLSLLEVVDLVETTRDVVDDVWRQTEHDHYPESRMLHLLDVIGGSFGRFVQKKLGSLKLWEDPYYLV KENLKAGISICEQWVIVCSHLTGQVWQRYVPHPWKSGKYFPETLDKLGKRLEEVLAIRTIHEKLLYFLPA SEERIVCLSRVFEPFTGVNPVQYNPYTEPLWKAAVSQYEKIIAPAEQKIAGKLKNYISEIQDSPQQLLQA FLKYKELVKRPTISKELMLERETLLARLGDSAKDFRLDFENRCRGIPGDPSGPLSGKNLSEVVNNIVWVR QLELKVDDTIKIAEALLSDLSGFRSFHRSAEDLLDQFKLYEQEQFDDWSREVQSGLSDSRSGLCIEANSR IMELDPNDGALKVHYSDRLVILLREVRQLSALGFVIPAKIQQVANVAQKFCKQAIILKQVAHFYNSIDQQ MIQSQRPMMLQSALAFEQIIKNSKAGSGGKSQITWDNPKELEGYIQKLQNAAERLATENRRLRKWHTTFC EKVVILMNIDLLRQQQRWKDGLQELRTGLATVAAQGFQASDMRAWRQHWNHQLYKALEHQYQVGLEALNE NLPEINVDLTYKQGRLQFRPPFEEIRAKYYREMKRFIGIPNQFKGVGEAGDESIFSVMIDRNASGFLTIY SKAEDLFRRLSAVLHQHKEWVVIGQVDMEALVEKNLSTVHDWEKNFKALKIKGKEVERLPSSGFLCVALA VLEFTL

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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