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Report for CCDS89529.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89529.1 Public Mus musculus 2 Fbxo3 23 108 98 CCDS HistoryNCBI Gene:57443Re-query CCDS DB by CCDS ID:89529.1Re-query CCDS DB by GeneID:57443See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89529.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000111136.7 ENSMUSP00000106766.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000111136.7Link to Ensembl Protein Viewer:ENSMUSP00000106766.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000111136Re-query CCDS DB by Protein ID:ENSMUSP00000106766
Original member Current member NCBI NM_001355507.1 NP_001342436.1 Accepted alive Link to Nucleotide Sequence:NM_001355507.1Link to Protein Sequence:NP_001342436.1Re-query CCDS DB by Nucleotide ID:NM_001355507Re-query CCDS DB by Protein ID:NP_001342436Link to BLAST:NP_001342436.1

Chromosomal Locations for CCDS 89529.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 104027863 104027966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 104030344 104030433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 104033596 104033759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 104042904 104043018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 104045658 104045862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 104047934 104047979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 104050271 104050355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 104051134 104051256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 104053365 104053480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 104054836 104054859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 104059882 104059895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1086 nt):
ATGGCTGCCGTAGAGGCCGAGACGGGGCTGCTGACCCTGGAGTCGCTGCCCACCGACCCTCTGCTGCTCA
TCTTATCCTTCGTGGACTACAGGGACCTAATCAATTGTTGCTATGTTAGTCGAAGACTTAGCCAGCTTTC
AACTCATGATCCACTGTGGAGAAGACATTGCAAAAAATACTGGCTGATATCTGAGGAAGAAAAAGCCGGG
AAGAGTCAGTGCTGGAGATCCCTCTTCATAGAGACCTACTCAGACGTGGGGAGGTACATCGACCATTACG
CCGCCATTAAAAAGGCCTGGCGTGACCTCAAGAAGTACTTGGAGCCCAGGTGTCCTCGGATGGTTTTATC
TCTGAAAGAGGGCGCACGTGAGGAAGACCTGGATGCTGTCGAAGCTCAGATCGGTTGCAAGCTCCCGGAT
GATTATCGCTGTTCATACCGGATCCACAACGGGCAAAAGTTAGTGGTGCCGGGGTTGCTGGGAAGTATGG
CACTGTCCAATCACTACCGCTCTGAAGATCTACTAGATGTTGATACTGCTGCAGGAGGATTTCAGCAGAG
ACAGGGACTGAAATACTGTCTCCCTTTAACCTTTTGCATACACACCGGCTTGAGTCAGTACATAGCTGTG
GAGGCTGCAGAGGGGCGGAATAAGAACGAAGTGTTCTACCAATGTCCAGACCAAATGGCTCGGAATCCTG
CTGCTATTGACATGTTTATCATAGGTGCTACTTTTACCGACTGGTTTACATCCTATGTCAACAATGTTGT
ATCAGGTGGTTTCCCCATCATCAGAGACCAGATTTTCAGATATATTCATGATCCAGAATGTGTGGCAACA
ACTGGAGATATTACAGTTTCAGTGTCCACATCGTTTCTGCCAGAACTCAGCTCTGTGCATCCGCCACACT
ATTTCTTCACATACCGAATCAGGATTGAAATGTCAAGGGATGCTCTTCCTGAGAAGGCCTGTCAGTTGGA
CAGTCGCTACTGGAGGATAACAAACGCTAAAGGGGATGTGGAAGAAGTCCAGGGACCTGGAGTAGTCGGT
GAATTTCCAATTATTAGCCCAGGAAATGGGTCCTGA

Translation (361 aa):
MAAVEAETGLLTLESLPTDPLLLILSFVDYRDLINCCYVSRRLSQLSTHDPLWRRHCKKYWLISEEEKAG
KSQCWRSLFIETYSDVGRYIDHYAAIKKAWRDLKKYLEPRCPRMVLSLKEGAREEDLDAVEAQIGCKLPD
DYRCSYRIHNGQKLVVPGLLGSMALSNHYRSEDLLDVDTAAGGFQQRQGLKYCLPLTFCIHTGLSQYIAV
EAAEGRNKNEVFYQCPDQMARNPAAIDMFIIGATFTDWFTSYVNNVVSGGFPIIRDQIFRYIHDPECVAT
TGDITVSVSTSFLPELSSVHPPHYFFTYRIRIEMSRDALPEKACQLDSRYWRITNAKGDVEEVQGPGVVG
EFPIISPGNGS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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